RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 HGSNATQ68CP4 663 aa24.26■■□□□ 1.47
SMARCD2-201ENST00000225742 SYT2Q8N9I0 419 aaPredicted RBP24.26■■□□□ 1.47
SMARCD2-201ENST00000225742 ZNF622Q969S3 477 aaKnown RBP eCLIP24.26■■□□□ 1.47
SMARCD2-201ENST00000225742 CAPZA3Q96KX2 299 aa24.26■■□□□ 1.47
SMARCD2-201ENST00000225742 MED4Q9NPJ6 270 aa24.26■■□□□ 1.47
SMARCD2-201ENST00000225742 HYOU1Q9Y4L1 999 aa24.26■■□□□ 1.47
SMARCD2-201ENST00000225742 RAD21O60216 631 aa24.25■■□□□ 1.47
SMARCD2-201ENST00000225742 CYP3A4P08684 503 aa24.25■■□□□ 1.47
SMARCD2-201ENST00000225742 ARSHQ5FYA8 562 aa24.25■■□□□ 1.47
SMARCD2-201ENST00000225742 FAM83BQ5T0W9 1011 aa24.25■■□□□ 1.47
SMARCD2-201ENST00000225742 LSM14BQ9BX40 385 aaKnown RBP24.25■■□□□ 1.47
SMARCD2-201ENST00000225742 NOL4O94818 638 aa24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 NDUFB10O96000 172 aa24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 HSPA1LP34931 641 aa24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 FRMD5Q7Z6J6 570 aa24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 FAM71BQ8TC56 605 aa24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 SMCR8Q8TEV9 937 aaPredicted RBP24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 ZCCHC17Q9NP64 241 aaKnown RBP24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 TRAF3IP3Q9Y228 551 aa24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 BMP3P12645 472 aa24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 CACNB3P54284 484 aa24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 ADAM9Q13443 819 aa24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 PRR16Q569H4 304 aa24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 RBM26Q5T8P6 1007 aaKnown RBP24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 CATSPER3Q86XQ3 398 aa24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 CREG2Q8IUH2 290 aa24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 NOX5Q96PH1 765 aa24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 POLR3CQ9BUI4 534 aaPredicted RBP24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 MLXIPQ9HAP2 919 aa24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 KCNQ5Q9NR82 932 aa24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 TBC1D7Q9P0N9 293 aa24.24■■□□□ 1.47
SMARCD2-201ENST00000225742 FAM196BA6NMK8 535 aa24.23■■□□□ 1.47
SMARCD2-201ENST00000225742 PIK3CDO00329 1044 aa24.23■■□□□ 1.47
SMARCD2-201ENST00000225742 MOCS3O95396 460 aa24.23■■□□□ 1.47
SMARCD2-201ENST00000225742 STAT3P40763 770 aa24.23■■□□□ 1.47
SMARCD2-201ENST00000225742 GIT2Q14161 759 aa24.23■■□□□ 1.47
SMARCD2-201ENST00000225742 HSP90B2PQ58FF3 399 aa24.23■■□□□ 1.47
SMARCD2-201ENST00000225742 NELFCDQ8IXH7 590 aa24.23■■□□□ 1.47
SMARCD2-201ENST00000225742 LENG9Q96B70 501 aa24.23■■□□□ 1.47
SMARCD2-201ENST00000225742 FGFBP2Q9BYJ0 223 aa24.23■■□□□ 1.47
SMARCD2-201ENST00000225742 CAPN6Q9Y6Q1 641 aa24.23■■□□□ 1.47
SMARCD2-201ENST00000225742 SCN9AQ15858 1988 aa24.22■■□□□ 1.47
SMARCD2-201ENST00000225742 NPHP3-ACAD11A0A0J9YXS1 232 aa24.22■■□□□ 1.47
SMARCD2-201ENST00000225742 POTEFA5A3E0 1075 aa24.22■■□□□ 1.47
SMARCD2-201ENST00000225742 PDE2AO00408 941 aaPredicted RBP24.22■■□□□ 1.47
SMARCD2-201ENST00000225742 POTEIP0CG38 1075 aa24.22■■□□□ 1.47
SMARCD2-201ENST00000225742 POTEGQ6S5H5 508 aa24.22■■□□□ 1.47
SMARCD2-201ENST00000225742 POTEEQ6S8J3 1075 aa24.22■■□□□ 1.47
SMARCD2-201ENST00000225742 AIPL1Q9NZN9 384 aa24.22■■□□□ 1.47
SMARCD2-201ENST00000225742 CALCOCO1Q9P1Z2 691 aa24.22■■□□□ 1.47
SMARCD2-201ENST00000225742 RNF14Q9UBS8 474 aa24.22■■□□□ 1.47
SMARCD2-201ENST00000225742 H0YIN7 160 aa24.21■■□□□ 1.47
SMARCD2-201ENST00000225742 CALUO43852 315 aaPredicted RBP24.21■■□□□ 1.47
SMARCD2-201ENST00000225742 SPATA31C1P0DKV0 1188 aa24.21■■□□□ 1.47
SMARCD2-201ENST00000225742 SLURP2P0DP57 97 aa24.21■■□□□ 1.47
SMARCD2-201ENST00000225742 AARSP49588 968 aaKnown RBP eCLIP24.21■■□□□ 1.47
SMARCD2-201ENST00000225742 BMT2Q1RMZ1 405 aa24.21■■□□□ 1.47
SMARCD2-201ENST00000225742 EPM2AIP1Q7L775 607 aaPredicted RBP24.21■■□□□ 1.47
SMARCD2-201ENST00000225742 OSBPL9Q96SU4 736 aa24.21■■□□□ 1.47
SMARCD2-201ENST00000225742 ADAM21Q9UKJ8 722 aa24.21■■□□□ 1.47
SMARCD2-201ENST00000225742 PDXKO00764 312 aa24.21■■□□□ 1.47
SMARCD2-201ENST00000225742 EPS15P42566 896 aa24.21■■□□□ 1.47
SMARCD2-201ENST00000225742 KNOP1Q1ED39 458 aaKnown RBP24.21■■□□□ 1.47
SMARCD2-201ENST00000225742 TDRD12Q587J7 1177 aaKnown RBP24.21■■□□□ 1.47
SMARCD2-201ENST00000225742 P2RX7Q99572 595 aaKnown RBP24.21■■□□□ 1.47
SMARCD2-201ENST00000225742 PLCB1Q9NQ66 1216 aa24.21■■□□□ 1.47
SMARCD2-201ENST00000225742 PCDHAC2Q9Y5I4 1007 aa24.21■■□□□ 1.47
SMARCD2-201ENST00000225742 ZNF185O15231 689 aa24.2■■□□□ 1.46
SMARCD2-201ENST00000225742 POLR2FP61218 127 aaKnown RBP24.2■■□□□ 1.46
SMARCD2-201ENST00000225742 IKQ13123 557 aaPredicted RBP24.2■■□□□ 1.46
SMARCD2-201ENST00000225742 SHROOM1Q2M3G4 852 aaPredicted RBP24.2■■□□□ 1.46
SMARCD2-201ENST00000225742 CCNI2Q6ZMN8 369 aaPredicted RBP24.2■■□□□ 1.46
SMARCD2-201ENST00000225742 SUGCTQ9HAC7 445 aa24.2■■□□□ 1.46
SMARCD2-201ENST00000225742 NLRC4Q9NPP4 1024 aa24.2■■□□□ 1.46
SMARCD2-201ENST00000225742 KIF13BQ9NQT8 1826 aa24.2■■□□□ 1.46
SMARCD2-201ENST00000225742 GFPT1Q06210 699 aaPredicted RBP24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 C10orf76Q5T2E6 689 aa24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 CNKSR1Q969H4 720 aa24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 GANQ9H2C0 597 aa24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 VAV3Q9UKW4 847 aa24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 FAM86B1E9PN63 330 aa24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 MSH4O15457 936 aa24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 TLR2O60603 784 aa24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 GDF11O95390 407 aa24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 EYA4O95677 639 aa24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 FAM86B2P0C5J1 330 aa24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 GAP43P17677 238 aa24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 NR2F2P24468 414 aa24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 PAFAH1B1P43034 410 aa24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 KCNH2Q12809 1159 aa24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 CC2D2BQ6DHV5 1058 aa24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 SUPT20HQ8NEM7 779 aa24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 METTL14Q9HCE5 456 aaKnown RBP24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 HERC5Q9UII4 1024 aaKnown RBP24.19■■□□□ 1.46
SMARCD2-201ENST00000225742 LRRIQ3A6PVS8 624 aaPredicted RBP24.18■■□□□ 1.46
SMARCD2-201ENST00000225742 SLC16A3O15427 465 aaKnown RBP24.18■■□□□ 1.46
SMARCD2-201ENST00000225742 RPL13P26373 211 aaKnown RBP24.18■■□□□ 1.46
SMARCD2-201ENST00000225742 ANXA13P27216 316 aa24.18■■□□□ 1.46
SMARCD2-201ENST00000225742 CACNB1Q02641 598 aaPredicted RBP24.18■■□□□ 1.46
SMARCD2-201ENST00000225742 RASSF7Q02833 373 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms