RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 ACTR5Q9H9F9 607 aaPredicted RBP17.53■□□□□ 0.4
SF3A2-201ENST00000221494 DDX4Q9NQI0 724 aaKnown RBP17.53■□□□□ 0.4
SF3A2-201ENST00000221494 SERPINA10Q9UK55 444 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 PCDHAC2Q9Y5I4 1007 aa17.53■□□□□ 0.4
SF3A2-201ENST00000221494 HSPA9P38646 679 aaKnown RBP17.52■□□□□ 0.4
SF3A2-201ENST00000221494 MNAT1P51948 309 aa17.52■□□□□ 0.4
SF3A2-201ENST00000221494 PSMD2Q13200 908 aa17.52■□□□□ 0.4
SF3A2-201ENST00000221494 FAM47AQ5JRC9 791 aa17.52■□□□□ 0.4
SF3A2-201ENST00000221494 RCSD1Q6JBY9 416 aa17.52■□□□□ 0.4
SF3A2-201ENST00000221494 RIC8AQ9NPQ8 531 aa17.52■□□□□ 0.4
SF3A2-201ENST00000221494 RBM12Q9NTZ6 932 aaKnown RBP17.52■□□□□ 0.4
SF3A2-201ENST00000221494 BARHL2Q9NY43 387 aa17.52■□□□□ 0.4
SF3A2-201ENST00000221494 BTNL10A8MVZ5 291 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 RAD17O75943 681 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 FAM107AO95990 144 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 VIL1P09327 827 aaKnown RBP17.51■□□□□ 0.39
SF3A2-201ENST00000221494 MDH1P40925 334 aaKnown RBP17.51■□□□□ 0.39
SF3A2-201ENST00000221494 SMTNP53814 917 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 TNNC1P63316 161 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 STK4Q13043 487 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 PDCLQ13371 301 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 NAA35Q5VZE5 725 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 UNC13DQ70J99 1090 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 ARMC9Q7Z3E5 817 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 P3H4Q92791 437 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 CALML4Q96GE6 196 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 CAPN7Q9Y6W3 813 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 NFKBIEO00221 500 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 MYBP10242 640 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 SLC7A5Q01650 507 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 PICALMQ13492 652 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 RSBN1LQ6PCB5 846 aaPredicted RBP17.51■□□□□ 0.39
SF3A2-201ENST00000221494 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.51■□□□□ 0.39
SF3A2-201ENST00000221494 SLC44A5Q8NCS7 719 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 SMCR8Q8TEV9 937 aaPredicted RBP17.51■□□□□ 0.39
SF3A2-201ENST00000221494 ZNF473Q8WTR7 871 aaKnown RBP17.51■□□□□ 0.39
SF3A2-201ENST00000221494 ZBTB9Q96C00 473 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 CCDC43Q96MW1 224 aaKnown RBP17.51■□□□□ 0.39
SF3A2-201ENST00000221494 GMLQ99445 158 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 SEMA6BQ9H3T3 888 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 VCPKMTQ9H867 229 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 PLCB1Q9NQ66 1216 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 CEP72Q9P209 647 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 ZNRF3Q9ULT6 936 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 PCDHGC5Q9Y5F6 944 aa17.51■□□□□ 0.39
SF3A2-201ENST00000221494 ZNF233A6NK53 670 aa17.5■□□□□ 0.39
SF3A2-201ENST00000221494 SERPING1P05155 500 aa17.5■□□□□ 0.39
SF3A2-201ENST00000221494 PLEKP08567 350 aaPredicted RBP17.5■□□□□ 0.39
SF3A2-201ENST00000221494 MAP2K2P36507 400 aa17.5■□□□□ 0.39
SF3A2-201ENST00000221494 CUL1Q13616 776 aa17.5■□□□□ 0.39
SF3A2-201ENST00000221494 NAB2Q15742 525 aa17.5■□□□□ 0.39
SF3A2-201ENST00000221494 CDC37Q16543 378 aaPredicted RBP17.5■□□□□ 0.39
SF3A2-201ENST00000221494 SLC9C1Q4G0N8 1177 aa17.5■□□□□ 0.39
SF3A2-201ENST00000221494 C16orf86Q6ZW13 317 aa17.5■□□□□ 0.39
SF3A2-201ENST00000221494 CCDC50Q8IVM0 306 aa17.5■□□□□ 0.39
SF3A2-201ENST00000221494 KIAA0895Q8NCT3 520 aa17.5■□□□□ 0.39
SF3A2-201ENST00000221494 EHD4Q9H223 541 aa17.5■□□□□ 0.39
SF3A2-201ENST00000221494 TAOK3Q9H2K8 898 aa17.5■□□□□ 0.39
SF3A2-201ENST00000221494 MKNK2Q9HBH9 465 aa17.5■□□□□ 0.39
SF3A2-201ENST00000221494 BCS1LQ9Y276 419 aa17.5■□□□□ 0.39
SF3A2-201ENST00000221494 TSPY2A6NKD2 308 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 LRRC53A6NM62 1247 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 PP2D1A8MPX8 630 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 H0YHG0 523 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 STXBP3O00186 592 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 CHUKO15111 745 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 NMT2O60551 498 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 HEXIM1O94992 359 aaKnown RBP17.49■□□□□ 0.39
SF3A2-201ENST00000221494 TFAP4Q01664 338 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 ACTN3Q08043 901 aaPredicted RBP17.49■□□□□ 0.39
SF3A2-201ENST00000221494 NFIAQ12857 509 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 BIRC3Q13489 604 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 SEPT2Q15019 361 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 C10orf76Q5T2E6 689 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 RNPC3Q96LT9 517 aaKnown RBP17.49■□□□□ 0.39
SF3A2-201ENST00000221494 TSG101Q99816 390 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 BAZ2BQ9UIF8 2168 aaKnown RBP17.49■□□□□ 0.39
SF3A2-201ENST00000221494 GOLGA6L10A6NI86 522 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 TMCO5BA8MYB1 307 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 SMARCA1P28370 1054 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 CDK8P49336 464 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 INF2Q27J81 1249 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 FBXW10Q5XX13 1052 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 SV2BQ7L1I2 683 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 RRAGAQ7L523 313 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 NLRP14Q86W24 1093 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 NIM1KQ8IY84 436 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 NLGN2Q8NFZ4 835 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 PIK3R5Q8WYR1 880 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 LRRC45Q96CN5 670 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 INPP4AQ96PE3 977 aaPredicted RBP17.49■□□□□ 0.39
SF3A2-201ENST00000221494 ZMYND12Q9H0C1 365 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 MYO3BQ8WXR4 1341 aa17.49■□□□□ 0.39
SF3A2-201ENST00000221494 ZNF646O15015 1829 aaPredicted RBP17.49■□□□□ 0.39
SF3A2-201ENST00000221494 ADAMTS3O15072 1205 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 RASA1P20936 1047 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 RBM5P52756 815 aaKnown RBP eCLIP17.48■□□□□ 0.39
SF3A2-201ENST00000221494 GABPAQ06546 454 aa17.48■□□□□ 0.39
SF3A2-201ENST00000221494 ITGB3BPQ13352 177 aaPredicted RBP17.48■□□□□ 0.39
SF3A2-201ENST00000221494 NONOQ15233 471 aaKnown RBP eCLIP17.48■□□□□ 0.393e-6■■■□□ 18.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms