RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 A0A0G2JMZ2 1700 aa20.65■□□□□ 0.9
CTSA-201ENST00000191018 AKR1B15C9JRZ8 316 aaPredicted RBP20.65■□□□□ 0.9
CTSA-201ENST00000191018 DHX15O43143 795 aaKnown RBP20.65■□□□□ 0.9
CTSA-201ENST00000191018 CHMP2AO43633 222 aa20.65■□□□□ 0.9
CTSA-201ENST00000191018 PPP1R12BO60237 982 aaPredicted RBP20.65■□□□□ 0.9
CTSA-201ENST00000191018 STX10O60499 249 aa20.65■□□□□ 0.9
CTSA-201ENST00000191018 CACNB1Q02641 598 aaPredicted RBP20.65■□□□□ 0.9
CTSA-201ENST00000191018 RBL2Q08999 1139 aa20.65■□□□□ 0.9
CTSA-201ENST00000191018 CTTNQ14247 550 aaKnown RBP20.65■□□□□ 0.9
CTSA-201ENST00000191018 LRRC41Q15345 812 aa20.65■□□□□ 0.9
CTSA-201ENST00000191018 HERC4Q5GLZ8 1057 aaPredicted RBP20.65■□□□□ 0.9
CTSA-201ENST00000191018 CEP135Q66GS9 1140 aa20.65■□□□□ 0.9
CTSA-201ENST00000191018 SNRNP48Q6IEG0 339 aaKnown RBP20.65■□□□□ 0.9
CTSA-201ENST00000191018 CREBRFQ8IUR6 639 aa20.65■□□□□ 0.9
CTSA-201ENST00000191018 CNOT6LQ96LI5 555 aaKnown RBP20.65■□□□□ 0.9
CTSA-201ENST00000191018 PDCD2LQ9BRP1 358 aa20.65■□□□□ 0.9
CTSA-201ENST00000191018 TUBGCP2Q9BSJ2 902 aa20.65■□□□□ 0.9
CTSA-201ENST00000191018 BHMT2Q9H2M3 363 aa20.65■□□□□ 0.9
CTSA-201ENST00000191018 A0A1W2PQC6 194 aa20.64■□□□□ 0.9
CTSA-201ENST00000191018 GYPCP04921 128 aa20.64■□□□□ 0.9
CTSA-201ENST00000191018 PANX2Q96RD6 677 aa20.64■□□□□ 0.9
CTSA-201ENST00000191018 RMDN3Q96TC7 470 aa20.64■□□□□ 0.9
CTSA-201ENST00000191018 REEP2Q9BRK0 252 aa20.64■□□□□ 0.9
CTSA-201ENST00000191018 FGFBP2Q9BYJ0 223 aa20.64■□□□□ 0.9
CTSA-201ENST00000191018 MAF1Q9H063 256 aa20.64■□□□□ 0.9
CTSA-201ENST00000191018 AGO4Q9HCK5 861 aaKnown RBP20.64■□□□□ 0.9
CTSA-201ENST00000191018 HOXC10Q9NYD6 342 aa20.64■□□□□ 0.9
CTSA-201ENST00000191018 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.64■□□□□ 0.91e-6■■□□□ 13.6
CTSA-201ENST00000191018 SPDYE16A6NNV3 312 aaPredicted RBP20.64■□□□□ 0.89
CTSA-201ENST00000191018 ARHGAP6O43182 974 aa20.64■□□□□ 0.89
CTSA-201ENST00000191018 KRT18P05783 430 aaKnown RBP20.64■□□□□ 0.89
CTSA-201ENST00000191018 EIF2AK2P19525 551 aaKnown RBP20.64■□□□□ 0.89
CTSA-201ENST00000191018 UBXN1Q04323 297 aa20.64■□□□□ 0.89
CTSA-201ENST00000191018 DPY19L2Q6NUT2 758 aa20.64■□□□□ 0.89
CTSA-201ENST00000191018 NSMFQ6X4W1 530 aa20.64■□□□□ 0.89
CTSA-201ENST00000191018 LRRC55Q6ZSA7 311 aa20.64■□□□□ 0.89
CTSA-201ENST00000191018 NYAP1Q6ZVC0 841 aa20.64■□□□□ 0.89
CTSA-201ENST00000191018 USP50Q70EL3 339 aaPredicted RBP20.64■□□□□ 0.89
CTSA-201ENST00000191018 PPFIBP1Q86W92 1011 aa20.64■□□□□ 0.89
CTSA-201ENST00000191018 MB21D1Q8N884 522 aa20.64■□□□□ 0.89
CTSA-201ENST00000191018 NEK9Q8TD19 979 aa20.64■□□□□ 0.89
CTSA-201ENST00000191018 BAG1Q99933 345 aaPredicted RBP20.64■□□□□ 0.89
CTSA-201ENST00000191018 TEX13BQ9BXU2 312 aa20.64■□□□□ 0.89
CTSA-201ENST00000191018 MFAP3LO75121 409 aa20.63■□□□□ 0.89
CTSA-201ENST00000191018 RAD51AP2Q09MP3 1159 aa20.63■□□□□ 0.89
CTSA-201ENST00000191018 ITGB3BPQ13352 177 aaPredicted RBP20.63■□□□□ 0.89
CTSA-201ENST00000191018 BAATQ14032 418 aaPredicted RBP20.63■□□□□ 0.89
CTSA-201ENST00000191018 TPH2Q8IWU9 490 aa20.63■□□□□ 0.89
CTSA-201ENST00000191018 EEF2KMTQ96G04 330 aa20.63■□□□□ 0.89
CTSA-201ENST00000191018 C16orf45Q96MC5 204 aaPredicted RBP20.63■□□□□ 0.89
CTSA-201ENST00000191018 RUSC1Q9BVN2 902 aa20.63■□□□□ 0.89
CTSA-201ENST00000191018 CSADQ9Y600 493 aa20.63■□□□□ 0.89
CTSA-201ENST00000191018 FGFR1OPO95684 399 aaKnown RBP20.62■□□□□ 0.89
CTSA-201ENST00000191018 DNM2P50570 870 aa20.62■□□□□ 0.89
CTSA-201ENST00000191018 MTMR1Q13613 665 aa20.62■□□□□ 0.89
CTSA-201ENST00000191018 TRIM14Q14142 442 aa20.62■□□□□ 0.89
CTSA-201ENST00000191018 RINT1Q6NUQ1 792 aa20.62■□□□□ 0.89
CTSA-201ENST00000191018 XRRA1Q6P2D8 792 aa20.62■□□□□ 0.89
CTSA-201ENST00000191018 PIGOQ8TEQ8 1089 aa20.62■□□□□ 0.89
CTSA-201ENST00000191018 ZC3H15Q8WU90 426 aaKnown RBP20.62■□□□□ 0.89
CTSA-201ENST00000191018 SCFD1Q8WVM8 642 aa20.62■□□□□ 0.89
CTSA-201ENST00000191018 TBC1D7Q9P0N9 293 aa20.62■□□□□ 0.89
CTSA-201ENST00000191018 WRAP73Q9P2S5 460 aaPredicted RBP20.62■□□□□ 0.89
CTSA-201ENST00000191018 LCTP09848 1927 aa20.62■□□□□ 0.89
CTSA-201ENST00000191018 CASP14P31944 242 aa20.62■□□□□ 0.89
CTSA-201ENST00000191018 FXR1P51114 621 aaKnown RBP eCLIP20.62■□□□□ 0.89
CTSA-201ENST00000191018 MIIPQ5JXC2 388 aa20.62■□□□□ 0.89
CTSA-201ENST00000191018 CNGA4Q8IV77 575 aa20.62■□□□□ 0.89
CTSA-201ENST00000191018 CCDC51Q96ER9 411 aa20.62■□□□□ 0.89
CTSA-201ENST00000191018 PURBQ96QR8 312 aaKnown RBP20.62■□□□□ 0.89
CTSA-201ENST00000191018 NACC1Q96RE7 527 aa20.62■□□□□ 0.89
CTSA-201ENST00000191018 TSG101Q99816 390 aa20.62■□□□□ 0.89
CTSA-201ENST00000191018 KCTD10Q9H3F6 313 aa20.62■□□□□ 0.89
CTSA-201ENST00000191018 TRMT1Q9NXH9 659 aaKnown RBP20.62■□□□□ 0.89
CTSA-201ENST00000191018 KIF20AO95235 890 aa20.61■□□□□ 0.89
CTSA-201ENST00000191018 PRKCSHP14314 528 aaPredicted RBP20.61■□□□□ 0.89
CTSA-201ENST00000191018 FECHP22830 423 aa20.61■□□□□ 0.89
CTSA-201ENST00000191018 IREB2P48200 963 aaKnown RBP20.61■□□□□ 0.89
CTSA-201ENST00000191018 ARHGEF16Q5VV41 709 aa20.61■□□□□ 0.89
CTSA-201ENST00000191018 C1orf186Q6ZWK4 172 aa20.61■□□□□ 0.89
CTSA-201ENST00000191018 EPM2AIP1Q7L775 607 aaPredicted RBP20.61■□□□□ 0.89
CTSA-201ENST00000191018 CNKSR2Q8WXI2 1034 aa20.61■□□□□ 0.89
CTSA-201ENST00000191018 SCN4AP35499 1836 aa20.61■□□□□ 0.89
CTSA-201ENST00000191018 NKRFO15226 690 aaKnown RBP eCLIP20.6■□□□□ 0.89
CTSA-201ENST00000191018 TNNT1P13805 278 aa20.6■□□□□ 0.89
CTSA-201ENST00000191018 EPHX2P34913 555 aa20.6■□□□□ 0.89
CTSA-201ENST00000191018 MTIF2P46199 727 aaKnown RBP20.6■□□□□ 0.89
CTSA-201ENST00000191018 VSIG10LQ86VR7 867 aa20.6■□□□□ 0.89
CTSA-201ENST00000191018 PPP1R13BQ96KQ4 1090 aa20.6■□□□□ 0.89
CTSA-201ENST00000191018 PRIMPOLQ96LW4 560 aa20.6■□□□□ 0.89
CTSA-201ENST00000191018 LXNQ9BS40 222 aa20.6■□□□□ 0.89
CTSA-201ENST00000191018 ACAD9Q9H845 621 aa20.6■□□□□ 0.89
CTSA-201ENST00000191018 TBC1D22BQ9NU19 505 aa20.6■□□□□ 0.89
CTSA-201ENST00000191018 KIAA1217Q5T5P2 1943 aa20.6■□□□□ 0.89
CTSA-201ENST00000191018 B4DLN1 442 aa20.6■□□□□ 0.89
CTSA-201ENST00000191018 TPM2P07951 284 aa20.6■□□□□ 0.89
CTSA-201ENST00000191018 MYCLP12524 364 aaPredicted RBP20.6■□□□□ 0.89
CTSA-201ENST00000191018 FKBP3Q00688 224 aaKnown RBP20.6■□□□□ 0.89
CTSA-201ENST00000191018 TREML2Q5T2D2 321 aa20.6■□□□□ 0.89
CTSA-201ENST00000191018 MIER3Q7Z3K6 550 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms