RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 IGLV3-22A0A075B6J6 115 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 CHMP2AO43633 222 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 USO1O60763 962 aaKnown RBP9.13□□□□□ -0.95
VAMP3-201ENST00000054666 EYA4O95677 639 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 TUBB4BP68371 445 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 WHAMMP3Q1A5X7 153 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 TMCO3Q6UWJ1 677 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 ZNF662Q6ZS27 426 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 ARHGAP27Q6ZUM4 889 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 SRGAP1Q7Z6B7 1085 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 LDHDQ86WU2 507 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 SFR1Q86XK3 245 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 CDAN1Q8IWY9 1227 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 RABGGTAQ92696 567 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 ZNF341Q9BYN7 854 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 EDEM3Q9BZQ6 932 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 NUCKS1Q9H1E3 243 aaKnown RBP9.13□□□□□ -0.95
VAMP3-201ENST00000054666 BHMT2Q9H2M3 363 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 CCPG1Q9ULG6 757 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 REXO2Q9Y3B8 237 aaKnown RBP9.13□□□□□ -0.95
VAMP3-201ENST00000054666 PCDHA2Q9Y5H9 948 aa9.13□□□□□ -0.95
VAMP3-201ENST00000054666 RASSF10A6NK89 507 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 SPDYE4A6NLX3 237 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 POTEB2H3BUK9 544 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 WDR46O15213 610 aaKnown RBP9.12□□□□□ -0.95
VAMP3-201ENST00000054666 CALUO43852 315 aaPredicted RBP9.12□□□□□ -0.95
VAMP3-201ENST00000054666 FAM13AO94988 1023 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 GAP43P17677 238 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 ERCC3P19447 782 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 NR2F2P24468 414 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 POLD1P28340 1107 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 HNRNPH3P31942 346 aaKnown RBP9.12□□□□□ -0.95
VAMP3-201ENST00000054666 PRELPP51888 382 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 MARSP56192 900 aaKnown RBP9.12□□□□□ -0.95
VAMP3-201ENST00000054666 HERVK_113P62684 666 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 KIF5AQ12840 1032 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 PPP2R5CQ13362 524 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 ADAM9Q13443 819 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 GIT2Q14161 759 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 NBPF9Q3BBW0 867 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 CEP55Q53EZ4 464 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 ARSHQ5FYA8 562 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 KRT26Q7Z3Y9 468 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 CYP2W1Q8TAV3 490 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 LPAR1Q92633 364 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 ZBED3Q96IU2 234 aaPredicted RBP9.12□□□□□ -0.95
VAMP3-201ENST00000054666 WDR18Q9BV38 432 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 TEKT3Q9BXF9 490 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 FGFBP2Q9BYJ0 223 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 KCTD10Q9H3F6 313 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.12□□□□□ -0.95
VAMP3-201ENST00000054666 DDX41Q9UJV9 622 aaKnown RBP9.12□□□□□ -0.95
VAMP3-201ENST00000054666 PLAGL2Q9UPG8 496 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 MUTP22033 750 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 RPS12P25398 132 aaKnown RBP9.12□□□□□ -0.95
VAMP3-201ENST00000054666 CLCN6P51797 869 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 VAV2P52735 878 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 PSMC6P62333 389 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 CBX1P83916 185 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 RASA3Q14644 834 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 RRAGAQ7L523 313 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 SLC5A5Q92911 643 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 ZNF577Q9BSK1 485 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 GINM1Q9NU53 330 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 FBXO28Q9NVF7 368 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 CEP72Q9P209 647 aa9.12□□□□□ -0.95
VAMP3-201ENST00000054666 CTDP1Q9Y5B0 961 aaPredicted RBP9.12□□□□□ -0.95
VAMP3-201ENST00000054666 CTAGE15A4D2H0 777 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 LRRC53A6NM62 1247 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 EML1O00423 815 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 NKRFO15226 690 aaKnown RBP eCLIP9.11□□□□□ -0.95
VAMP3-201ENST00000054666 AKR1B10O60218 316 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 PSMD10O75832 226 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 GCNT3O95395 438 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 ICAM1P05362 532 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 CTAGE8P0CG41 777 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 RPL13P26373 211 aaKnown RBP9.11□□□□□ -0.95
VAMP3-201ENST00000054666 KIF11P52732 1056 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 UBXN2AP68543 259 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 MAP3K10Q02779 954 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 CTTNQ14247 550 aaKnown RBP9.11□□□□□ -0.95
VAMP3-201ENST00000054666 KNOP1Q1ED39 458 aaKnown RBP9.11□□□□□ -0.95
VAMP3-201ENST00000054666 TDRD12Q587J7 1177 aaKnown RBP9.11□□□□□ -0.95
VAMP3-201ENST00000054666 PDXDC1Q6P996 788 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 STXBP4Q6ZWJ1 553 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 RSRC2Q7L4I2 434 aaKnown RBP9.11□□□□□ -0.95
VAMP3-201ENST00000054666 OTOP1Q7RTM1 612 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 CTAGE6Q86UF2 777 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 MCF2L2Q86YR7 1114 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 TRIM59Q8IWR1 403 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 TPH2Q8IWU9 490 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 CTAGE4Q8IX94 777 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 ZC3H3Q8IXZ2 948 aaKnown RBP9.11□□□□□ -0.95
VAMP3-201ENST00000054666 NEK9Q8TD19 979 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 SMCR8Q8TEV9 937 aaPredicted RBP9.11□□□□□ -0.95
VAMP3-201ENST00000054666 HOOK2Q96ED9 719 aa9.11□□□□□ -0.95
VAMP3-201ENST00000054666 LSM14BQ9BX40 385 aaKnown RBP9.11□□□□□ -0.95
VAMP3-201ENST00000054666 IFIH1Q9BYX4 1025 aaKnown RBP9.11□□□□□ -0.95
VAMP3-201ENST00000054666 GLIS2Q9BZE0 524 aaPredicted RBP9.11□□□□□ -0.95
VAMP3-201ENST00000054666 LUC7LQ9NQ29 371 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms