RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 DDX47Q9H0S4 455 aaKnown RBP15.4■□□□□ 0.06
USH1C-201ENST00000005226 EPN3Q9H201 632 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 TSKSQ9UJT2 592 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 PCDHA12Q9UN75 941 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 PCDHGC5Q9Y5F6 944 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 ABCB11O95342 1321 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 CCDC88AQ3V6T2 1871 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 GNPATO15228 680 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 AKR1B1P15121 316 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 TMOD1P28289 359 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 EPS15P42566 896 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 IFT88Q13099 833 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 PSMD2Q13200 908 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 TAF4BQ92750 862 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 EDEM3Q9BZQ6 932 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 H0YHG0 523 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 MEIS1O00470 390 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 PPP1R37O75864 691 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 KIAA0754O94854 1291 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 PLA2G4BP0C869 781 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 HSD17B3P37058 310 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 SF3A3Q12874 501 aaKnown RBP eCLIP15.39■□□□□ 0.05
USH1C-201ENST00000005226 UAP1Q16222 522 aaPredicted RBP15.39■□□□□ 0.05
USH1C-201ENST00000005226 GJB7Q6PEY0 223 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 NLRP14Q86W24 1093 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 NYXQ9GZU5 481 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 GANQ9H2C0 597 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 JMJD4Q9H9V9 463 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 EMILIN3Q9NT22 766 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 ROBO1Q9Y6N7 1651 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 TMCO5BA8MYB1 307 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 USP17L15C9J2P7 530 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 USP17L13C9JLJ4 530 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 USP17L11C9JVI0 530 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 USP17L18D6R9N7 530 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 USP17L22D6RA61 530 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 USP17L17D6RBQ6 530 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 USP17L19D6RCP7 530 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 USP17L20D6RJB6 530 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 MEFVO15553 781 aaPredicted RBP15.39■□□□□ 0.05
USH1C-201ENST00000005226 KRT18P05783 430 aaKnown RBP15.39■□□□□ 0.05
USH1C-201ENST00000005226 LDHCP07864 332 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 ECHS1P30084 290 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 MDH1P40925 334 aaKnown RBP15.39■□□□□ 0.05
USH1C-201ENST00000005226 USP17L24Q0WX57 530 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 USP17L6PQ6QN14 398 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 DPP8Q6V1X1 898 aaPredicted RBP15.39■□□□□ 0.05
USH1C-201ENST00000005226 ADGRF4Q8IZF3 695 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 PROM2Q8N271 834 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 IKZF4Q9H2S9 585 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 RNF14Q9UBS8 474 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 AJAP1Q9UKB5 411 aaPredicted RBP15.39■□□□□ 0.05
USH1C-201ENST00000005226 PCDHA2Q9Y5H9 948 aa15.39■□□□□ 0.05
USH1C-201ENST00000005226 FNTAP49354 379 aa15.38■□□□□ 0.05
USH1C-201ENST00000005226 ITGB3BPQ13352 177 aaPredicted RBP15.38■□□□□ 0.05
USH1C-201ENST00000005226 CHADLQ6NUI6 762 aa15.38■□□□□ 0.05
USH1C-201ENST00000005226 KCTD1Q719H9 257 aa15.38■□□□□ 0.05
USH1C-201ENST00000005226 B4GALNT4Q76KP1 1039 aa15.38■□□□□ 0.05
USH1C-201ENST00000005226 IRF2BP2Q7Z5L9 587 aa15.38■□□□□ 0.05
USH1C-201ENST00000005226 MYCBPAPQ8TBZ2 947 aa15.38■□□□□ 0.05
USH1C-201ENST00000005226 KCTD10Q9H3F6 313 aa15.38■□□□□ 0.05
USH1C-201ENST00000005226 ZNF287Q9HBT7 754 aa15.38■□□□□ 0.05
USH1C-201ENST00000005226 NARFQ9UHQ1 456 aa15.38■□□□□ 0.05
USH1C-201ENST00000005226 ESYT2A0FGR8 921 aa15.38■□□□□ 0.05
USH1C-201ENST00000005226 USP17L10C9JJH3 530 aa15.38■□□□□ 0.05
USH1C-201ENST00000005226 F8W031 263 aaPredicted RBP15.38■□□□□ 0.05
USH1C-201ENST00000005226 KIF4AO95239 1232 aa15.38■□□□□ 0.05
USH1C-201ENST00000005226 RHBDL3P58872 404 aa15.38■□□□□ 0.05
USH1C-201ENST00000005226 PSMC6P62333 389 aa15.38■□□□□ 0.05
USH1C-201ENST00000005226 FAM182BQ5T319 152 aa15.38■□□□□ 0.05
USH1C-201ENST00000005226 MCTP2Q6DN12 878 aa15.38■□□□□ 0.05
USH1C-201ENST00000005226 TAF1DQ9H5J8 278 aaPredicted RBP15.38■□□□□ 0.05
USH1C-201ENST00000005226 BMP2KQ9NSY1 1161 aaPredicted RBP15.38■□□□□ 0.05
USH1C-201ENST00000005226 POTEFA5A3E0 1075 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 DCDC2CA8MYV0 355 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 POTEIP0CG38 1075 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 IBSPP21815 317 aaPredicted RBP15.37■□□□□ 0.05
USH1C-201ENST00000005226 NR2F2P24468 414 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 TNNC1P63316 161 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 GPSM2P81274 684 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 ARSHQ5FYA8 562 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 POTEGQ6S5H5 508 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 POTEEQ6S8J3 1075 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 SUGP1Q8IWZ8 645 aaKnown RBP15.37■□□□□ 0.05
USH1C-201ENST00000005226 GPATCH11Q8N954 259 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 RBM46Q8TBY0 533 aaKnown RBP15.37■□□□□ 0.05
USH1C-201ENST00000005226 SYN2Q92777 582 aaPredicted RBP15.37■□□□□ 0.05
USH1C-201ENST00000005226 SPAG5Q96R06 1193 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 CELF4Q9BZC1 486 aaKnown RBP15.37■□□□□ 0.05
USH1C-201ENST00000005226 TRIM31Q9BZY9 425 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 TMBIM4Q9HC24 238 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 MTMR4Q9NYA4 1195 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 AIPL1Q9NZN9 384 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 AMACRQ9UHK6 382 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 SART1O43290 800 aaKnown RBP15.37■□□□□ 0.05
USH1C-201ENST00000005226 DCAF17Q5H9S7 520 aaPredicted RBP15.37■□□□□ 0.05
USH1C-201ENST00000005226 ADAT2Q7Z6V5 191 aaKnown RBP15.37■□□□□ 0.05
USH1C-201ENST00000005226 MREGQ8N565 214 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 METTL13Q8N6R0 699 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 WHAMMQ8TF30 809 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms