RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Creb3l3Q91XE9 479 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Tbrg4Q91YM4 630 aaKnown RBP8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 AticQ9CWJ9 592 aaKnown RBP8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Prl2c5Q9JLV9 222 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Pik3c2aQ61194 1686 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Col22a1E9Q7P1 1613 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Col3a1P08121 1464 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Maml3D4QGC2 1135 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Zfp839E9PUU5 921 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 TsksO54887 585 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Tp53P02340 387 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Cyp2b9P12790 491 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Nr5a1P33242 462 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Card10P58660 1021 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Sash1P59808 1230 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Gm1604bQ3TRG0 118 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Znf827Q505G8 1078 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Adad1Q5SUE7 619 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 R3hdm2Q80TM6 1044 aaKnown RBP8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 VmacQ8BP01 174 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Slc35g1Q8BY79 368 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Q8R1Y2 203 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Ankrd49Q8VE42 238 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Gpr108Q91WD0 569 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Nt5c1bQ91YE9 573 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 1700020D05RikQ99PB1 294 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Ccdc89Q9DA73 370 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Slit1Q80TR4 1531 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Snapc4Q8BP86 1333 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Topaz1E5FYH1 1653 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Xirp1O70373 1129 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 FerP70451 823 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Ssrp1Q08943 708 aaKnown RBP8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Cdc14aQ6GQT0 603 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Asic1Q6NXK8 526 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Gpr139Q80UC8 345 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Ppfia2Q8BSS9 1257 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Caskin2Q8VHK1 1201 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Syce1Q9D495 329 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Calml3Q9D6P8 149 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 IscuQ9D7P6 168 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 March8Q9DBD2 286 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Kat2aQ9JHD2 830 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 TefQ9JLC6 301 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Dip2cE9PWR4 1557 aa8.28□□□□□ -1.08
Bdnf-209ENSMUST00000111050 Gm21698A0A087WQP8 267 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Gm21663A0A0G2JE01 267 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Gm7347D3YYI9 267 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 5031410I06RikE9Q4E0 267 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Zc3h7bF8VPP8 982 aaKnown RBP8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Api5O35841 504 aaKnown RBP8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Abl1P00520 1123 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 RxrbP28704 520 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Gpsm3Q3U1Z5 159 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Rrp36Q3UFY0 244 aaKnown RBP8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Sf3b2Q3UJB0 878 aaKnown RBP8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 E2f5Q61502 335 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ttc19Q8CC21 365 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Olfr805Q8VFI4 319 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Sgf29Q9DA08 293 aaKnown RBP8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Git2Q9JLQ2 708 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Tob2Q9JM55 345 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Adgrf5G5E8Q8 1348 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Krt78E9Q0F0 1068 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Mroh9G5E8L9 891 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Rag1P15919 1040 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Eno1P17182 434 aaKnown RBP8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Creb1Q01147 341 aaKnown RBP8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Pyroxd1Q3TMV7 498 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Pla2g4fQ50L41 855 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 SkiQ60698 725 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Tlr13Q6R5N8 991 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Gcfc2Q8BKT3 769 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Suds3Q8BR65 328 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Tyw3Q8BSA9 257 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Rcor2Q8C796 523 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Fam228aQ8CDW1 299 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Rfwd2Q9R1A8 733 aaKnown RBP8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Trim10Q9WUH5 489 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Gabbr1Q9WV18 960 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Mast3Q3U214 1321 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 PtprvP70289 1705 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Herc3A6H6S0 1050 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Bin2D3Z6Q9 489 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Stat4P42228 749 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Fam8a1Q3URQ4 399 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 EregQ61521 162 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Nr2e1Q64104 385 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 KaznQ69ZS8 779 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Slc44a1Q6X893 653 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ift74Q8BKE9 600 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Zdhhc14Q8BQQ1 489 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Rccd1Q8BTU7 377 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Terb1Q8C0V1 768 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Ints9Q8K114 658 aaKnown RBP8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 OtoaQ8K561 1137 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 ZgpatQ8VDM1 511 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Fkbp6Q91XW8 327 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Snx24Q9CRB0 169 aa8.27□□□□□ -1.09
Bdnf-209ENSMUST00000111050 Eef1gQ9D8N0 437 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms