RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Il6stQ00560 917 aa23.53■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Rsad1Q5SUV1 442 aa23.53■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Krt14Q61781 484 aa23.53■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Cyp26b1Q811W2 512 aa23.53■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Sun2Q8BJS4 731 aa23.53■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Exoc1Q8R3S6 894 aa23.53■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Spdl1Q923A2 608 aa23.53■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 RnmtQ9D0L8 465 aaKnown RBP23.53■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 FibpQ9JI19 357 aa23.53■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Extl3Q9WVL6 918 aa23.53■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Sbno2Q7TNB8 1349 aa23.52■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Tpm3P21107 285 aaKnown RBP23.52■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Igfbp4P47879 254 aa23.52■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Taf1bP97358 586 aa23.52■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Vwa3aQ3UVV9 1148 aa23.52■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Kcnk18Q6VV64 394 aa23.52■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Klhl30Q8C3F7 581 aa23.52■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Ctu1Q99J10 420 aa23.52■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Syt5Q9R0N5 386 aa23.52■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Orc4O88708 433 aa23.51■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Abcb4P21440 1276 aa23.51■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Ric8aQ3TIR3 530 aa23.51■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Cacnb1Q8R3Z5 597 aa23.51■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Nxf1Q99JX7 618 aaKnown RBP23.51■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Dnajc18Q9CZJ9 357 aa23.51■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Syce1Q9D495 329 aa23.51■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Dnajc25A2ALW5 357 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Rabgap1A2AWA9 1064 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Tal1P22091 329 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Hmgcs2P54869 508 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Gabpb2P81069 414 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Trappc3lQ4KL14 181 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Ecm1Q61508 559 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Fam20aQ8CID3 541 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Mrpl58Q8R035 206 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Tmem134Q8R0J4 195 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Txndc5Q91W90 417 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Lamb2Q61292 1799 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Cntnap2Q9CPW0 1332 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Trim5E9PV98 497 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Ugt1a6bK9J7B2 531 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 AurkbO70126 345 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 GpiP06745 558 aaKnown RBP23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Pstpip1P97814 415 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Pou2f2Q00196 463 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Pdlim7Q3TJD7 457 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Rasip1Q3U0S6 961 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Rnf207Q3V3A7 635 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Ugt1a6Q64435 531 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Herc4Q6PAV2 1057 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Ugt1a7cQ6ZQM8 531 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 H2-Q4Q8HWB2 354 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Rpap2Q8VC34 614 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Rab3il1Q8VDV3 383 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Pcdhb12Q91Y07 789 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Nrbp1Q99J45 535 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 RragcQ99K70 398 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Gimap3Q99MI6 301 aa23.5■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Mier3Q3UHF3 551 aa23.49■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Ano6Q6P9J9 911 aa23.49■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Rbm41Q8JZV4 413 aa23.49■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Mical1Q8VDP3 1048 aa23.49■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Itga2bQ9QUM0 1033 aa23.49■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Gm5934D3Z4U6 212 aa23.48■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Tmigd3G3X8R9 209 aa23.48■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Tnfaip8l3Q3TBL6 204 aa23.48■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Rnf157Q3TEL6 685 aa23.48■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Antxr2Q6DFX2 487 aa23.48■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Jade2Q6ZQF7 829 aa23.48■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Tmem63cQ8CBX0 802 aa23.48■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Abhd2Q9QXM0 425 aa23.48■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Phtf1Q9QZ09 761 aa23.48■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Lrp2bpQ9D4C6 346 aa23.47■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Sh2b2Q9JID9 621 aa23.47■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Ripk3Q9QZL0 486 aa23.47■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Dhtkd1A2ATU0 921 aa23.47■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Vmn2r79E9Q067 851 aa23.47■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Scarf1Q5ND28 820 aa23.47■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Apol10aQ8CCA5 318 aa23.47■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Lrrc41Q8K1C9 807 aa23.47■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Pstpip2Q99M15 334 aa23.47■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Chaf1aQ9QWF0 911 aa23.47■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Myh11O08638 1972 aa23.46■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Spocd1B1ASB6 936 aa23.46■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Idh1O88844 414 aaKnown RBP23.46■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Psmc5P62196 406 aa23.46■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Ppp1r1bQ60829 194 aa23.46■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 PpihQ9D868 188 aa23.46■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 IydQ9DCX8 285 aa23.46■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Tbx18Q9EPZ6 613 aa23.46■■□□□ 1.35
Ccdc88a-202ENSMUST00000109477 Cep126Q0VBV7 1103 aa23.45■■□□□ 1.34
Ccdc88a-202ENSMUST00000109477 Nlrp4cQ3TKR3 982 aa23.45■■□□□ 1.34
Ccdc88a-202ENSMUST00000109477 Tmem63bQ3TWI9 832 aa23.45■■□□□ 1.34
Ccdc88a-202ENSMUST00000109477 Eif3j1Q3UGC7 261 aaKnown RBP23.45■■□□□ 1.34
Ccdc88a-202ENSMUST00000109477 Tgoln2Q62314 363 aa23.45■■□□□ 1.34
Ccdc88a-202ENSMUST00000109477 Tmem87aQ8BXN9 555 aa23.45■■□□□ 1.34
Ccdc88a-202ENSMUST00000109477 Myl7Q9QVP4 175 aa23.45■■□□□ 1.34
Ccdc88a-202ENSMUST00000109477 Plod3Q9R0E1 741 aa23.45■■□□□ 1.34
Ccdc88a-202ENSMUST00000109477 Tex21Q9R0U9 575 aa23.45■■□□□ 1.34
Ccdc88a-202ENSMUST00000109477 UgcgO88693 394 aa23.45■■□□□ 1.34
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms