RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Atad5Q4QY64 1826 aa13.89□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Gm45861A0A1B0GRY3 1923 aa13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Gm11549A0A286YD83 63 aa13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Man1b1A2AJ15 658 aa13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 2610008E11RikG3X964 669 aa13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Cer1O55233 272 aa13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Mcm3P25206 812 aaKnown RBP13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Wdr5P61965 334 aa13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Spink5Q148R4 1017 aa13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Pbxip1Q3TVI8 727 aa13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Slc27a1Q60714 646 aa13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Nxf7Q80SZ6 620 aaKnown RBP13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Samm50Q8BGH2 469 aa13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Grik4Q8BMF5 956 aa13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 LRWD1Q8BUI3 648 aaKnown RBP13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Gm5591Q8CDK1 855 aa13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Cchcr1Q8K2I2 770 aa13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Prmt7Q922X9 692 aa13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Rbm10Q99KG3 930 aaKnown RBP13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Ttc9bQ9D6E4 239 aa13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Lrrc46Q9DAP0 323 aa13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Tfr2Q9JKX3 798 aa13.88□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Arhgef10lA2AWP8 1280 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Gm3252E9PUT9 216 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Gm3468E9QAJ8 216 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Axin1O35625 863 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Gpr25P0C5I1 358 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Il2rbP16297 539 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Rit2P70425 217 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Mief2Q5NCS9 454 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Ush1gQ80T11 461 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Ccdc172Q810N9 267 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Fbxo44Q8BK26 255 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Mrps27Q8BK72 415 aaKnown RBP13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 VcpkmtQ8C436 228 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 4931406P16RikQ8C5X1 1059 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 N4bp3Q8C7U1 537 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Lrrc2Q8VDB8 371 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Asah2Q9JHE3 756 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Tmod3Q9JHJ0 352 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Fmnl1Q9JL26 1094 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Mtmr9Q9Z2D0 545 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Col4a3Q9QZS0 1669 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Zfp804bA0A0G2JGH6 1343 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Tmem131O70472 1877 aa13.87□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Myo15bI7HPW8 3033 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Gm7356A0A087WSA6 508 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Malrd1A2AJX4 2123 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Zbtb21E9Q444 1094 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Cd86P42082 309 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Stat1P42225 749 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Tulp2P46686 562 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Hoxc13P50207 328 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 DmpkP54265 631 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 MafbP54841 323 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Ctdnep1Q3TP92 244 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Wnt8aQ64527 354 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 ScapQ6GQT6 1276 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Dalrd3Q6PJN8 538 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Cyp4f39Q8BGU0 532 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 F13a1Q8BH61 732 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Sept8Q8CHH9 429 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Plcb4Q91UZ1 1175 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Supt16hQ920B9 1047 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Ndufb9Q9CQJ8 179 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 LlphQ9D945 130 aaKnown RBP13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 IydQ9DCX8 285 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Cntn6Q9JMB8 1028 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Kank3Q9Z1P7 791 aa13.86□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Phactr2B1AVP0 632 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 DgkhD3YXJ0 1156 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Zfr2E9Q5M4 874 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 RabggtbP53612 339 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Bpifa6Q0VGU8 367 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Eif3j1Q3UGC7 261 aaKnown RBP13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Lrrcc1Q69ZB0 1026 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Fam214aQ69ZK7 1075 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 C6.1alQ7M757 291 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Usp38Q8BW70 1042 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Kdm4aQ8BW72 1064 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 4933409G03RikQ8C5U0 320 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 CnstQ8CBC4 711 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Adgrg3Q8R0T6 542 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Wasf1Q8R5H6 559 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Clstn3Q99JH7 956 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Rufy3Q9D394 469 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Nr2e3Q9QXZ7 395 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Oaz3Q9R109 243 aa13.85□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Myh9Q8VDD5 1960 aaKnown RBP13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Akap17bA2A3V1 959 aa13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Tex13cD3YU32 604 aa13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Trim30dE9PWL0 497 aa13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Cdc25aP48964 514 aa13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Ppfia3P60469 1194 aa13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Pla2g5P97391 137 aa13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 SPINDOCQ05AH6 381 aa13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Kmt5bQ3U8K7 883 aa13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Utp18Q5SSI6 552 aaKnown RBP13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Q5XFZ0 217 aa13.84□□□□□ -0.19
Ccdc28b-202ENSMUST00000106035 Sun2Q8BJS4 731 aa13.84□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms