RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 RBBP6Q7Z6E9 1792 aaKnown RBP18.93■□□□□ 0.62
PHGDH-211ENST00000641213 FRMD3A2A2Y4 597 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 EPHB6O15197 1021 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 MSH4O15457 936 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 CYP3A4P08684 503 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 SPATA31C1P0DKV0 1188 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 RPA1P27694 616 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 PSMC6P62333 389 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 RAD51AP2Q09MP3 1159 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 SPDYE2Q495Y8 402 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 HERC4Q5GLZ8 1057 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-211ENST00000641213 FAM83BQ5T0W9 1011 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 ZNF662Q6ZS27 426 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 CCDC84Q86UT8 332 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-211ENST00000641213 GOPCQ9HD26 462 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 ZNF277Q9NRM2 450 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-211ENST00000641213 ZBTB21Q9ULJ3 1066 aa18.93■□□□□ 0.62
PHGDH-211ENST00000641213 ZBTB12Q9Y330 459 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-211ENST00000641213 EIF3CLB5ME19 914 aaKnown RBP18.92■□□□□ 0.62
PHGDH-211ENST00000641213 TRAF5O00463 557 aa18.92■□□□□ 0.62
PHGDH-211ENST00000641213 HNRNPH3P31942 346 aaKnown RBP18.92■□□□□ 0.62
PHGDH-211ENST00000641213 OGFOD1Q8N543 542 aa18.92■□□□□ 0.62
PHGDH-211ENST00000641213 CEP112Q8N8E3 955 aa18.92■□□□□ 0.62
PHGDH-211ENST00000641213 CYP2W1Q8TAV3 490 aa18.92■□□□□ 0.62
PHGDH-211ENST00000641213 EIF3CQ99613 913 aaKnown RBP18.92■□□□□ 0.62
PHGDH-211ENST00000641213 FAM207AQ9NSI2 230 aaPredicted RBP18.92■□□□□ 0.62
PHGDH-211ENST00000641213 TFR2Q9UP52 801 aa18.92■□□□□ 0.62
PHGDH-211ENST00000641213 COL4A3BPQ9Y5P4 624 aa18.92■□□□□ 0.62
PHGDH-211ENST00000641213 KRT18P05783 430 aaKnown RBP18.91■□□□□ 0.62
PHGDH-211ENST00000641213 ERCC3P19447 782 aa18.91■□□□□ 0.62
PHGDH-211ENST00000641213 CHMP4BP1P59074 171 aa18.91■□□□□ 0.62
PHGDH-211ENST00000641213 CCDC122Q5T0U0 273 aa18.91■□□□□ 0.62
PHGDH-211ENST00000641213 SCFD1Q8WVM8 642 aa18.91■□□□□ 0.62
PHGDH-211ENST00000641213 MMRN2Q9H8L6 949 aa18.91■□□□□ 0.62
PHGDH-211ENST00000641213 VAV3Q9UKW4 847 aa18.91■□□□□ 0.62
PHGDH-211ENST00000641213 PLAGL2Q9UPG8 496 aa18.91■□□□□ 0.62
PHGDH-211ENST00000641213 ZSCAN20P17040 1043 aaPredicted RBP18.91■□□□□ 0.62
PHGDH-211ENST00000641213 KIAA1328Q86T90 577 aa18.91■□□□□ 0.62
PHGDH-211ENST00000641213 NELFCDQ8IXH7 590 aa18.91■□□□□ 0.62
PHGDH-211ENST00000641213 SMAP1Q8IYB5 467 aaPredicted RBP18.91■□□□□ 0.62
PHGDH-211ENST00000641213 CEP63Q96MT8 703 aa18.91■□□□□ 0.62
PHGDH-211ENST00000641213 KCTD10Q9H3F6 313 aa18.91■□□□□ 0.62
PHGDH-211ENST00000641213 ZSWIM4Q9H7M6 989 aa18.91■□□□□ 0.62
PHGDH-211ENST00000641213 EMILIN3Q9NT22 766 aa18.91■□□□□ 0.62
PHGDH-211ENST00000641213 PUF60Q9UHX1 559 aaKnown RBP18.91■□□□□ 0.62
PHGDH-211ENST00000641213 DNM3Q9UQ16 869 aa18.91■□□□□ 0.62
PHGDH-211ENST00000641213 STK24Q9Y6E0 443 aa18.91■□□□□ 0.62
PHGDH-211ENST00000641213 MEIS1O00470 390 aa18.9■□□□□ 0.62
PHGDH-211ENST00000641213 KCNA3P22001 575 aa18.9■□□□□ 0.62
PHGDH-211ENST00000641213 ZNF76P36508 570 aa18.9■□□□□ 0.62
PHGDH-211ENST00000641213 CDAN1Q8IWY9 1227 aa18.9■□□□□ 0.62
PHGDH-211ENST00000641213 SYT2Q8N9I0 419 aaPredicted RBP18.9■□□□□ 0.62
PHGDH-211ENST00000641213 VEZTQ9HBM0 779 aa18.9■□□□□ 0.62
PHGDH-211ENST00000641213 IGLV3-22A0A075B6J6 115 aa18.89■□□□□ 0.62
PHGDH-211ENST00000641213 ZRANB2O95218 330 aaKnown RBP eCLIP18.89■□□□□ 0.62
PHGDH-211ENST00000641213 AMPD2Q01433 879 aa18.89■□□□□ 0.62
PHGDH-211ENST00000641213 TRAF1Q13077 416 aa18.89■□□□□ 0.62
PHGDH-211ENST00000641213 PABPC4Q13310 644 aaKnown RBP eCLIP18.89■□□□□ 0.629e-7■■■■□ 21.6
PHGDH-211ENST00000641213 GIT2Q14161 759 aa18.89■□□□□ 0.62
PHGDH-211ENST00000641213 BMS1Q14692 1282 aaKnown RBP18.89■□□□□ 0.62
PHGDH-211ENST00000641213 CCDC40Q4G0X9 1142 aa18.89■□□□□ 0.62
PHGDH-211ENST00000641213 TMCO3Q6UWJ1 677 aa18.89■□□□□ 0.62
PHGDH-211ENST00000641213 TBC1D5Q92609 795 aa18.89■□□□□ 0.62
PHGDH-211ENST00000641213 JAKMIP2Q96AA8 810 aa18.89■□□□□ 0.62
PHGDH-211ENST00000641213 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.89■□□□□ 0.62
PHGDH-211ENST00000641213 FHOD1Q9Y613 1164 aa18.89■□□□□ 0.62
PHGDH-211ENST00000641213 MYH10P35580 1976 aa18.89■□□□□ 0.62
PHGDH-211ENST00000641213 RCCD1A6NED2 376 aa18.89■□□□□ 0.61
PHGDH-211ENST00000641213 KRT86O43790 486 aa18.89■□□□□ 0.61
PHGDH-211ENST00000641213 KIF20AO95235 890 aa18.89■□□□□ 0.61
PHGDH-211ENST00000641213 IPO7O95373 1038 aaKnown RBP18.89■□□□□ 0.61
PHGDH-211ENST00000641213 TFRCP02786 760 aaKnown RBP18.89■□□□□ 0.61
PHGDH-211ENST00000641213 PLEKP08567 350 aaPredicted RBP18.89■□□□□ 0.61
PHGDH-211ENST00000641213 DPEP1P16444 411 aa18.89■□□□□ 0.61
PHGDH-211ENST00000641213 FKBP1CQ5VVH2 108 aa18.89■□□□□ 0.61
PHGDH-211ENST00000641213 CCDC174Q6PII3 467 aa18.89■□□□□ 0.61
PHGDH-211ENST00000641213 TEX2Q8IWB9 1127 aa18.89■□□□□ 0.61
PHGDH-211ENST00000641213 KRT222Q8N1A0 295 aa18.89■□□□□ 0.61
PHGDH-211ENST00000641213 CCDC155Q8N6L0 562 aa18.89■□□□□ 0.61
PHGDH-211ENST00000641213 PARD6BQ9BYG5 372 aa18.89■□□□□ 0.61
PHGDH-211ENST00000641213 TANGO6Q9C0B7 1094 aa18.89■□□□□ 0.61
PHGDH-211ENST00000641213 TMEM39BQ9GZU3 492 aa18.89■□□□□ 0.61
PHGDH-211ENST00000641213 LACRTQ9GZZ8 138 aa18.89■□□□□ 0.61
PHGDH-211ENST00000641213 RANBP17Q9H2T7 1088 aaKnown RBP18.89■□□□□ 0.61
PHGDH-211ENST00000641213 TBC1D12O60347 775 aa18.88■□□□□ 0.61
PHGDH-211ENST00000641213 CFBP00751 764 aa18.88■□□□□ 0.61
PHGDH-211ENST00000641213 KCNMA1Q12791 1236 aa18.88■□□□□ 0.61
PHGDH-211ENST00000641213 WHAMMP3Q1A5X7 153 aa18.88■□□□□ 0.61
PHGDH-211ENST00000641213 ZC3H3Q8IXZ2 948 aaKnown RBP18.88■□□□□ 0.61
PHGDH-211ENST00000641213 CHURC1Q8WUH1 139 aa18.88■□□□□ 0.61
PHGDH-211ENST00000641213 CCDC42Q96M95 316 aa18.88■□□□□ 0.61
PHGDH-211ENST00000641213 POLR3CQ9BUI4 534 aaPredicted RBP18.88■□□□□ 0.61
PHGDH-211ENST00000641213 ZHX3Q9H4I2 956 aa18.88■□□□□ 0.61
PHGDH-211ENST00000641213 ARHGAP20Q9P2F6 1191 aa18.88■□□□□ 0.61
PHGDH-211ENST00000641213 MYO6Q9UM54 1294 aa18.88■□□□□ 0.61
PHGDH-211ENST00000641213 ZNF263O14978 683 aa18.88■□□□□ 0.61
PHGDH-211ENST00000641213 GNA14O95837 355 aa18.88■□□□□ 0.61
PHGDH-211ENST00000641213 MARSP56192 900 aaKnown RBP18.88■□□□□ 0.61
PHGDH-211ENST00000641213 CYP27A1Q02318 531 aa18.88■□□□□ 0.61
PHGDH-211ENST00000641213 MIGA2Q7L4E1 593 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms