RNA–Protein interactions for RNA: ENST00000637340.1

EFHC1-232, Transcript of EF-hand domain containing 1, humanhuman

TSL 1 (best)

Gene EFHC1, Length 4,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-232ENST00000637340 NKRFO15226 690 aaKnown RBP eCLIP12.08□□□□□ -0.47
EFHC1-232ENST00000637340 CAND2O75155 1236 aa12.08□□□□□ -0.47
EFHC1-232ENST00000637340 FAM228BP0C875 321 aa12.08□□□□□ -0.47
EFHC1-232ENST00000637340 GSCP56915 257 aaPredicted RBP12.08□□□□□ -0.47
EFHC1-232ENST00000637340 ERVK-9P63128 1117 aa12.08□□□□□ -0.47
EFHC1-232ENST00000637340 ZBTB16Q05516 673 aa12.08□□□□□ -0.47
EFHC1-232ENST00000637340 CALCOCO2Q13137 446 aa12.08□□□□□ -0.47
EFHC1-232ENST00000637340 GLE1Q53GS7 698 aaKnown RBP12.08□□□□□ -0.47
EFHC1-232ENST00000637340 EAPPQ56P03 285 aaPredicted RBP12.08□□□□□ -0.47
EFHC1-232ENST00000637340 THEMIS2Q5TEJ8 643 aa12.08□□□□□ -0.47
EFHC1-232ENST00000637340 KLHDC7AQ5VTJ3 777 aa12.08□□□□□ -0.47
EFHC1-232ENST00000637340 PDXDC2PQ6P474 469 aa12.08□□□□□ -0.47
EFHC1-232ENST00000637340 RFX8Q6ZV50 586 aa12.08□□□□□ -0.47
EFHC1-232ENST00000637340 OSBPL1AQ9BXW6 950 aa12.08□□□□□ -0.47
EFHC1-232ENST00000637340 RASAL2Q9UJF2 1139 aa12.08□□□□□ -0.47
EFHC1-232ENST00000637340 IGF2BP3O00425 579 aaKnown RBP eCLIP12.08□□□□□ -0.48
EFHC1-232ENST00000637340 ATP6V1G2O95670 118 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 H2AFZP0C0S5 128 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 SKOR1P84550 965 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 CRYMQ14894 314 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 SETDB1Q15047 1291 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 SPRED3Q2MJR0 410 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 ALKBH5Q6P6C2 394 aaKnown RBP12.08□□□□□ -0.48
EFHC1-232ENST00000637340 TMTC3Q6ZXV5 915 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 H2AFVQ71UI9 128 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 TAB3Q8N5C8 712 aaPredicted RBP12.08□□□□□ -0.48
EFHC1-232ENST00000637340 PARD3BQ8TEW8 1205 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 GLG1Q92896 1179 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 XPO6Q96QU8 1125 aaKnown RBP12.08□□□□□ -0.48
EFHC1-232ENST00000637340 TSC22D3Q99576 134 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 GPCPD1Q9NPB8 672 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 CTTNBP2NLQ9P2B4 639 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 ASAP1Q9ULH1 1129 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 THRAP3Q9Y2W1 955 aaKnown RBP12.08□□□□□ -0.48
EFHC1-232ENST00000637340 PXDNQ92626 1479 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 FAM237AA0A1B0GTK4 181 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 USP17L3A6NCW0 530 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 USP17L4A6NCW7 530 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 CCT8L1PA6NM43 557 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 GFPT2O94808 682 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 PSMD2Q13200 908 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 CALCRLQ16602 461 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 USP17L1Q7RTZ2 530 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 ZBTB38Q8NAP3 1195 aaPredicted RBP12.08□□□□□ -0.48
EFHC1-232ENST00000637340 LMBR1Q8WVP7 490 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 ZMYND12Q9H0C1 365 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 C6orf50Q9HD87 102 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 FGFR1OP2Q9NVK5 253 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 USH1CQ9Y6N9 552 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 LRRD1A4D1F6 860 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 ADAM9Q13443 819 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 TTI2Q6NXR4 508 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 RNF10Q8N5U6 811 aaKnown RBP12.08□□□□□ -0.48
EFHC1-232ENST00000637340 NKIRAS1Q9NYS0 192 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 KCNG1Q9UIX4 513 aa12.08□□□□□ -0.48
EFHC1-232ENST00000637340 CETN3O15182 167 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 FLT3P36888 993 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 EVX2Q03828 476 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 CDC37Q16543 378 aaPredicted RBP12.07□□□□□ -0.48
EFHC1-232ENST00000637340 TRIM9Q9C026 710 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 TRIM7Q9C029 511 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 ETNK1Q9HBU6 452 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 TMBIM4Q9HC24 238 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 TCP11X1B4DZS4 312 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 CLIC2O15247 247 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 LRRN2O75325 713 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 SUN1O94901 812 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 UBOX5O94941 541 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 PPP4R3AQ6IN85 833 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 TMOD4Q9NZQ9 345 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 KLHL14Q9P2G3 628 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 PLAGL2Q9UPG8 496 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 ABCC12Q96J65 1359 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 SPOPO43791 374 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 FLOT1O75955 427 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 FAM26FQ5R3K3 315 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 PHLDB2Q86SQ0 1253 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 NEK9Q8TD19 979 aa12.07□□□□□ -0.48
EFHC1-232ENST00000637340 PLEKHG1Q9ULL1 1385 aa12.06□□□□□ -0.48
EFHC1-232ENST00000637340 hCG_2014768A0A024R1R8 64 aa12.06□□□□□ -0.48
EFHC1-232ENST00000637340 CCDC169A6NNP5 214 aa12.06□□□□□ -0.48
EFHC1-232ENST00000637340 USP17L8P0C7I0 530 aa12.06□□□□□ -0.48
EFHC1-232ENST00000637340 RANBP1P43487 201 aa12.06□□□□□ -0.48
EFHC1-232ENST00000637340 KCNJ2P63252 427 aa12.06□□□□□ -0.48
EFHC1-232ENST00000637340 ZNF844Q08AG5 666 aa12.06□□□□□ -0.48
EFHC1-232ENST00000637340 PKN1Q16512 942 aa12.06□□□□□ -0.48
EFHC1-232ENST00000637340 HP1BP3Q5SSJ5 553 aaPredicted RBP12.06□□□□□ -0.48
EFHC1-232ENST00000637340 SPICE1Q8N0Z3 855 aa12.06□□□□□ -0.48
EFHC1-232ENST00000637340 MSL3Q8N5Y2 521 aaKnown RBP12.06□□□□□ -0.48
EFHC1-232ENST00000637340 TBCKQ8TEA7 893 aa12.06□□□□□ -0.48
EFHC1-232ENST00000637340 DUSP9Q99956 384 aaKnown RBP12.06□□□□□ -0.48
EFHC1-232ENST00000637340 CNOT8Q9UFF9 292 aaKnown RBP12.06□□□□□ -0.48
EFHC1-232ENST00000637340 FRMPD2Q68DX3 1309 aaPredicted RBP12.06□□□□□ -0.48
EFHC1-232ENST00000637340 A8MUI8 341 aa12.06□□□□□ -0.48
EFHC1-232ENST00000637340 SERPING1P05155 500 aa12.06□□□□□ -0.48
EFHC1-232ENST00000637340 FNTAP49354 379 aa12.06□□□□□ -0.48
EFHC1-232ENST00000637340 PDXDC1Q6P996 788 aa12.06□□□□□ -0.48
EFHC1-232ENST00000637340 SLC44A5Q8NCS7 719 aa12.06□□□□□ -0.48
EFHC1-232ENST00000637340 RNF217Q8TC41 542 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms