RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 HMGB1P1B2RPK0 211 aaPredicted RBP16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 BACH1O14867 736 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 FGFR1OPO95684 399 aaKnown RBP16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 FAM107AO95990 144 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 HIBADHP31937 336 aaKnown RBP16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 HSD17B3P37058 310 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 HSPA9P38646 679 aaKnown RBP16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 UAP1Q16222 522 aaPredicted RBP16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 CALCRLQ16602 461 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 EMC10Q5UCC4 262 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 SPATS2Q86XZ4 545 aaKnown RBP16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 CCDC13Q8IYE1 715 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 GJA10Q969M2 543 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 NEUROG2Q9H2A3 272 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 VCPKMTQ9H867 229 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 TMBIM4Q9HC24 238 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 C6orf50Q9HD87 102 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 SAP30BPQ9UHR5 308 aaKnown RBP16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 KCNK3O14649 394 aa16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 SLC18A3Q16572 532 aa16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 ECM1Q16610 540 aa16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 MICALCLQ6ZW33 695 aa16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 SNX29Q8TEQ0 813 aa16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 RAD54LQ92698 747 aa16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 CYFIP2Q96F07 1278 aa16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 MTMR9Q96QG7 549 aa16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 PIGSQ96S52 555 aa16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 STK17AQ9UEE5 414 aa16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 COL4A3BPQ9Y5P4 624 aa16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 TRAF5O00463 557 aa16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 MAP2K2P36507 400 aa16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 DIXDC1Q155Q3 683 aa16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 ZCWPW2Q504Y3 356 aa16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 YTHDF3Q7Z739 585 aaKnown RBP16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 REXO1Q8N1G1 1221 aaKnown RBP16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 TSG101Q99816 390 aa16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 TAF1DQ9H5J8 278 aaPredicted RBP16.48■□□□□ 0.23
THUMPD1-206ENST00000636554 MYBP10242 640 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 TMOD1P28289 359 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 ACTN3Q08043 901 aaPredicted RBP16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 NELFCDQ8IXH7 590 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 ZNF444Q8N0Y2 327 aaPredicted RBP16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 SPZ1Q9BXG8 430 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 AP1M1Q9BXS5 423 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 LOC102724428A0A0B4J2F2 783 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 EDIL3O43854 480 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 RASA1P20936 1047 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 GNA11P29992 359 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 SIK1P57059 783 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 TNNC1P63316 161 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 COASYQ13057 564 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 SF3B3Q15393 1217 aaKnown RBP16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 QPCTQ16769 361 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 SMIM5Q71RC9 77 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 MYOCDQ8IZQ8 938 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 TGFBRAP1Q8WUH2 860 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 SLAIN2Q9P270 581 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 TMEM59LQ9UK28 342 aa16.47■□□□□ 0.23
THUMPD1-206ENST00000636554 FLT3P36888 993 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 CACNB1Q02641 598 aaPredicted RBP16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 ZNF844Q08AG5 666 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 KLHL30Q0D2K2 578 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 SOGA3Q5TF21 947 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 CCDC24Q8N4L8 307 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 UIMC1Q96RL1 719 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 EDEM3Q9BZQ6 932 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 UBA5Q9GZZ9 404 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 CXorf56Q9H5V9 222 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 PLCB1Q9NQ66 1216 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 ROBO3Q96MS0 1386 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 GOLGA6L10A6NI86 522 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 H0YGN5 161 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 GRIK5Q16478 980 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 C6orf89Q6UWU4 347 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 MAPKAPK5Q8IW41 473 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 ISCUQ9H1K1 167 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 LRRC4CQ9HCJ2 640 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 SEC63Q9UGP8 760 aaKnown RBP16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 SLC12A6Q9UHW9 1150 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 NFS1Q9Y697 457 aa16.46■□□□□ 0.23
THUMPD1-206ENST00000636554 NAV1Q8NEY1 1877 aa16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 SNED1Q8TER0 1413 aa16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 DCDC2CA8MYV0 355 aa16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 GCOM1H8Y6P7 765 aaPredicted RBP16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 MYZAPP0CAP1 466 aa16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 CTNNA1P35221 906 aaKnown RBP16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 FKBP3Q00688 224 aaKnown RBP16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 SETQ01105 290 aaPredicted RBP16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 ZKSCAN4Q969J2 545 aaPredicted RBP16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 DDX47Q9H0S4 455 aaKnown RBP16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 BCCIPQ9P287 314 aaKnown RBP eCLIP16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 FXR2P51116 673 aaKnown RBP eCLIP16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 SYN2Q92777 582 aaPredicted RBP16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 DNAJC19Q96DA6 116 aa16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 RIC8AQ9NPQ8 531 aa16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 LUC7LQ9NQ29 371 aaKnown RBP16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 KLC4Q9NSK0 619 aa16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 CNOT8Q9UFF9 292 aaKnown RBP16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 DDX20Q9UHI6 824 aaKnown RBP16.45■□□□□ 0.22
THUMPD1-206ENST00000636554 CEP104O60308 925 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms