RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 COPS5Q92905 334 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 KCNB2Q92953 911 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 SNX21Q969T3 373 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 JAKMIP1Q96N16 626 aaKnown RBP8.57□□□□□ -1.04
CIITA-214ENST00000636238 YME1L1Q96TA2 773 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 DSCC1Q9BVC3 393 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 PLVAPQ9BX97 442 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 HDAC6Q9UBN7 1215 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 DDX41Q9UJV9 622 aaKnown RBP8.57□□□□□ -1.04
CIITA-214ENST00000636238 TCF20Q9UGU0 1960 aaKnown RBP8.57□□□□□ -1.04
CIITA-214ENST00000636238 CACNA1HO95180 2353 aa8.56□□□□□ -1.04
CIITA-214ENST00000636238 GBF1Q92538 1859 aa8.56□□□□□ -1.04
CIITA-214ENST00000636238 EYA4O95677 639 aa8.56□□□□□ -1.04
CIITA-214ENST00000636238 FGAP02671 866 aa8.56□□□□□ -1.04
CIITA-214ENST00000636238 RPLP2P05387 115 aaKnown RBP8.56□□□□□ -1.04
CIITA-214ENST00000636238 CYP21A2P08686 494 aa8.56□□□□□ -1.04
CIITA-214ENST00000636238 GNAT1P11488 350 aa8.56□□□□□ -1.04
CIITA-214ENST00000636238 IRS1P35568 1242 aa8.56□□□□□ -1.04
CIITA-214ENST00000636238 SNAP25P60880 206 aa8.56□□□□□ -1.04
CIITA-214ENST00000636238 HAND2P61296 217 aa8.56□□□□□ -1.04
CIITA-214ENST00000636238 TRAF1Q13077 416 aa8.56□□□□□ -1.04
CIITA-214ENST00000636238 MBTPS1Q14703 1052 aa8.56□□□□□ -1.04
CIITA-214ENST00000636238 SUGP1Q8IWZ8 645 aaKnown RBP8.56□□□□□ -1.04
CIITA-214ENST00000636238 MYOCDQ8IZQ8 938 aa8.56□□□□□ -1.04
CIITA-214ENST00000636238 DBF4BQ8NFT6 615 aa8.56□□□□□ -1.04
CIITA-214ENST00000636238 SYTL5Q8TDW5 730 aaPredicted RBP8.56□□□□□ -1.04
CIITA-214ENST00000636238 IL17RAQ96F46 866 aa8.56□□□□□ -1.04
CIITA-214ENST00000636238 TMEM47Q9BQJ4 181 aa8.56□□□□□ -1.04
CIITA-214ENST00000636238 FOXD4L1Q9NU39 408 aa8.56□□□□□ -1.04
CIITA-214ENST00000636238 MRPL11Q9Y3B7 192 aaKnown RBP8.56□□□□□ -1.04
CIITA-214ENST00000636238 MBTPS2O43462 519 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 SLC16A2P36021 539 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 BMPR1AP36894 532 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 LTBRP36941 435 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 CBX2Q14781 532 aaPredicted RBP8.55□□□□□ -1.04
CIITA-214ENST00000636238 FAM26DQ5JW98 314 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 RNF20Q5VTR2 975 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 TTBK2Q6IQ55 1244 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.55□□□□□ -1.04
CIITA-214ENST00000636238 TRIM67Q6ZTA4 783 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 STOX1Q6ZVD7 989 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 TMCO2Q7Z6W1 182 aaPredicted RBP8.55□□□□□ -1.04
CIITA-214ENST00000636238 RPAINQ86UA6 219 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 DGKHQ86XP1 1220 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 RNF135Q8IUD6 432 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 DHX37Q8IY37 1157 aaKnown RBP8.55□□□□□ -1.04
CIITA-214ENST00000636238 FIBCD1Q8N539 461 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 CLP1Q92989 425 aaKnown RBP8.55□□□□□ -1.04
CIITA-214ENST00000636238 RMDN3Q96TC7 470 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 LARP6Q9BRS8 491 aaKnown RBP8.55□□□□□ -1.04
CIITA-214ENST00000636238 RNF41Q9H4P4 317 aaPredicted RBP8.55□□□□□ -1.04
CIITA-214ENST00000636238 CLDND1Q9NY35 253 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 MRVI1Q9Y6F6 885 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 COL4A4P53420 1690 aaPredicted RBP8.55□□□□□ -1.04
CIITA-214ENST00000636238 MCM3APO60318 1980 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 ZNF318Q5VUA4 2279 aa8.55□□□□□ -1.04
CIITA-214ENST00000636238 C17orf102A2RUQ5 167 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 TMEM221A6NGB7 291 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 PROB1E7EW31 1015 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 E7EWF7 191 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 K7ELQ4 463 aaPredicted RBP8.54□□□□□ -1.04
CIITA-214ENST00000636238 M0R296 226 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 NMT2O60551 498 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 MMP1P03956 469 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 THPOP40225 353 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 COASYQ13057 564 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 LY6KQ17RY6 165 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 TCTN1Q2MV58 587 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 CELF3Q5SZQ8 465 aaKnown RBP8.54□□□□□ -1.04
CIITA-214ENST00000636238 MYSM1Q5VVJ2 828 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 FAM117BQ6P1L5 589 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 SEPT14Q6ZU15 432 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 FBXL6Q8N531 539 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 PRSS33Q8NF86 280 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 P2RX5Q93086 422 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 TCEANC2Q96MN5 208 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 IFIH1Q9BYX4 1025 aaKnown RBP8.54□□□□□ -1.04
CIITA-214ENST00000636238 ZSWIM6Q9HCJ5 1215 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 GPCPD1Q9NPB8 672 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 CD207Q9UJ71 328 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 CYP46A1Q9Y6A2 500 aa8.54□□□□□ -1.04
CIITA-214ENST00000636238 CACNA1AO00555 2505 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 ZFHX2Q9C0A1 2572 aaPredicted RBP8.53□□□□□ -1.04
CIITA-214ENST00000636238 ZDBF2Q9HCK1 2354 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 LOC730098B7Z3J9 87 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 STXBP3O00186 592 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 STAM2O75886 525 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 NR3C2P08235 984 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 ATF7P17544 494 aaPredicted RBP8.53□□□□□ -1.04
CIITA-214ENST00000636238 CTNNB1P35222 781 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 AK2P54819 239 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 CHMP4BP1P59074 171 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 CTDSPL2Q05D32 466 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 SIGLEC14Q08ET2 396 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 ADAM15Q13444 863 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 TSGA10IPQ3SY00 556 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 ASPRV1Q53RT3 343 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 ARHGEF16Q5VV41 709 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 BLOC1S2Q6QNY1 142 aa8.53□□□□□ -1.04
CIITA-214ENST00000636238 RUFY3Q7L099 469 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms