RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 FLAD1Q8NFF5 587 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 PLBD2Q8NHP8 589 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 YTHDC2Q9H6S0 1430 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 XPOTO43592 962 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 KLHL30Q0D2K2 578 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 EIF4A2Q14240 407 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 SLC39A14Q15043 492 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 TTLL7Q6ZT98 887 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 TRIM42Q8IWZ5 723 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 CFAP61Q8NHU2 1237 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 FAM81AQ8TBF8 368 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 C14orf93Q9H972 538 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 KDM3AQ9Y4C1 1321 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 H0YCG3 227 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 SEMA3EO15041 775 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 SRGAP2BP0DMP2 458 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 SLC12A6Q9UHW9 1150 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 ATP8B3O60423 1300 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 BUB1O43683 1085 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 PDE6CP51160 858 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 SLC44A4Q53GD3 710 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 KRT40Q6A162 431 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 FMR1NBQ8N0W7 255 aaPredicted RBP10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 RETREG2Q8NC44 543 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 LRRN4CLQ8ND94 238 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 KDM4CQ9H3R0 1056 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 PCDHA5Q9Y5H7 936 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 HNRNPCL2B2RXH8 293 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 MAPK13O15264 365 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 HNRNPCL1O60812 293 aaKnown RBP10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 SRGAP2O75044 1071 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 DCTN3O75935 186 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 ATP5JP18859 108 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 PIK3CAP42336 1068 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 MSH2P43246 934 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 SCTRP47872 440 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 C6orf118Q5T5N4 469 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 PEX26Q7Z412 305 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 KIRREL3Q8IZU9 778 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 ATP6V1E2Q96A05 226 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 DYDC2Q96IM9 177 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 C1orf112Q9NSG2 853 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 MOSPD1Q9UJG1 213 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 FRMPD2Q68DX3 1309 aaPredicted RBP10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 NVLO15381 856 aaKnown RBP10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 C21orf2O43822 256 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 ANXA13P27216 316 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 YTHDF3Q7Z739 585 aaKnown RBP10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 TEKT3Q9BXF9 490 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 PDP2Q9P2J9 529 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 RAB21Q9UL25 225 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 ADCY9O60503 1353 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 M0R2C6 588 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 FANCAO15360 1455 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 TMCC1O94876 653 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 GHRP10912 638 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 FLT4P35916 1363 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 GNL1P36915 607 aaPredicted RBP10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 DMP1Q13316 513 aaPredicted RBP10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 CCDC84Q86UT8 332 aaPredicted RBP10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 RIN2Q8WYP3 895 aaPredicted RBP10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 MAP4K1Q92918 833 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 LSM14BQ9BX40 385 aaKnown RBP10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 DPH5Q9H2P9 285 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 RMI1Q9H9A7 625 aa10.63□□□□□ -0.71
SPTAN1-228ENST00000635853 KIAA0232Q92628 1395 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 CCT8L1PA6NM43 557 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 SPECC1L-ADORA2AF8WAN1 911 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 ARHGEF18Q6ZSZ5 1173 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 SPATA5Q8NB90 893 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 PDZD8Q8NEN9 1154 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 GDAP1Q8TB36 358 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 GRK7Q8WTQ7 553 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 PLEKHF1Q96S99 279 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 TTC1Q99614 292 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 ANKZF1Q9H8Y5 726 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 RIC8AQ9NPQ8 531 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 RHBDL2Q9NX52 303 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 CPSF3Q9UKF6 684 aaKnown RBP10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 MROH5Q6ZUA9 1318 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 RUNDC3BQ96NL0 473 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 NUDCD1Q96RS6 583 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 SNX25Q9H3E2 840 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 PCDHB13Q9Y5F0 798 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 SCINQ9Y6U3 715 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 EYA2O00167 538 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 MOCS3O95396 460 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 AARSP49588 968 aaKnown RBP eCLIP10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 DEUP1Q05D60 604 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 DOK7Q18PE1 504 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 KRT24Q2M2I5 525 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 U2AF1L4Q8WU68 220 aaKnown RBP10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 SPATA17Q96L03 361 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 NT5C3AQ9H0P0 336 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 NHEJ1Q9H9Q4 299 aaPredicted RBP10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 ABHD10Q9NUJ1 306 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 MYOM2P54296 1465 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 LRRIQ4A6NIV6 560 aa10.62□□□□□ -0.71
SPTAN1-228ENST00000635853 LIN7AO14910 233 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms