RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SDE2Q6IQ49 451 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 POTEBQ6S5H4 581 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 AFG1LQ8WV93 481 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 SNX21Q969T3 373 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 ULK4Q96C45 1275 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 ASIC4Q96FT7 647 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 BLZF1Q9H2G9 400 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 GPBP1L1Q9HC44 474 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-209ENST00000635750 ANLNQ9NQW6 1124 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 MAP3K20Q9NYL2 800 aaKnown RBP5.99□□□□□ -1.45
SCN1A-209ENST00000635750 CAPN11Q9UMQ6 739 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 L3MBTL1Q9Y468 752 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 ADGRF5Q8IZF2 1346 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 TMEM232C9JQI7 657 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 ALDH1A1P00352 501 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 LMNAP02545 664 aaKnown RBP5.99□□□□□ -1.45
SCN1A-209ENST00000635750 PSAPP07602 524 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 ADAM9Q13443 819 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 GTF2H3Q13889 308 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 VEPH1Q14D04 833 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 PHKG1Q16816 387 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 SLC10A5Q5PT55 438 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 TCP11Q8WWU5 503 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 CCDC17Q96LX7 622 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 SLF1Q9BQI6 1058 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 TRIM4Q9C037 500 aa5.99□□□□□ -1.45
SCN1A-209ENST00000635750 TPX2Q9ULW0 747 aaKnown RBP5.99□□□□□ -1.45
SCN1A-209ENST00000635750 ZFYVE9O95405 1425 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 DNAJC6O75061 913 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 HIF1AQ16665 826 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 MFSD14CQ5VZR4 134 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 SLFN13Q68D06 897 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 DNAJC24Q6P3W2 148 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 TRIM62Q9BVG3 475 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 TOM1L1O75674 476 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 KRT7P08729 469 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 BCAMP50895 628 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 ASPRV1Q53RT3 343 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 DALRD3Q5D0E6 543 aaKnown RBP5.98□□□□□ -1.45
SCN1A-209ENST00000635750 GPATCH4Q5T3I0 446 aaKnown RBP5.98□□□□□ -1.45
SCN1A-209ENST00000635750 SH3TC2Q8TF17 1288 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 WDR11Q9BZH6 1224 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 MAGEF1Q9HAY2 307 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 ZSCAN9O15535 394 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-209ENST00000635750 MAN1A2O60476 641 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 PFDN1O60925 122 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 NCF2P19878 526 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-209ENST00000635750 KCNJ6P48051 423 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 TAB3Q8N5C8 712 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-209ENST00000635750 OR8K1Q8NGG5 319 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 ZFYVE19Q96K21 471 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 CARD6Q9BX69 1037 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 MRPL40Q9NQ50 206 aaKnown RBP5.98□□□□□ -1.45
SCN1A-209ENST00000635750 HOXA7P31268 230 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-209ENST00000635750 PPARDQ03181 441 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 TJAP1Q5JTD0 557 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 HABP4Q5JVS0 413 aaKnown RBP5.98□□□□□ -1.45
SCN1A-209ENST00000635750 TMC4Q7Z404 712 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 SKAP1Q86WV1 359 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 SCYL3Q8IZE3 742 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 AMNQ9BXJ7 453 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 CALN1Q9BXU9 219 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 URB2Q14146 1524 aaKnown RBP5.98□□□□□ -1.45
SCN1A-209ENST00000635750 KLRF2D3W0D1 207 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 TTLL1O95922 423 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 LONRF3Q496Y0 759 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 PPHLN1Q8NEY8 458 aaKnown RBP5.98□□□□□ -1.45
SCN1A-209ENST00000635750 RMDN2Q96LZ7 410 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 ACAP3Q96P50 834 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 NFE2L3Q9Y4A8 694 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 NESP48681 1621 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 BLMP54132 1417 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-209ENST00000635750 LAD1O00515 517 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 POLR2FP61218 127 aaKnown RBP5.98□□□□□ -1.45
SCN1A-209ENST00000635750 MESDQ14696 234 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 MTHFSDQ2M296 383 aaKnown RBP5.98□□□□□ -1.45
SCN1A-209ENST00000635750 C20orf194Q5TEA3 1177 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 THEMIS2Q5TEJ8 643 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 ADAT2Q7Z6V5 191 aaKnown RBP5.98□□□□□ -1.45
SCN1A-209ENST00000635750 OTULINQ96BN8 352 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 LRRD1A4D1F6 860 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 SKIP12755 728 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 LONP1P36776 959 aaKnown RBP5.98□□□□□ -1.45
SCN1A-209ENST00000635750 FAM180AQ6UWF9 173 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 CEP170P1Q96L14 293 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 DACH2Q96NX9 599 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 KIF2CQ99661 725 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 PRDM5Q9NQX1 630 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-209ENST00000635750 ATG3Q9NT62 314 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 BABAM1Q9NWV8 329 aa5.98□□□□□ -1.45
SCN1A-209ENST00000635750 HADHAP40939 763 aa5.97□□□□□ -1.45
SCN1A-209ENST00000635750 MKRN3Q13064 507 aaKnown RBP5.97□□□□□ -1.45
SCN1A-209ENST00000635750 MTX1Q13505 466 aa5.97□□□□□ -1.45
SCN1A-209ENST00000635750 SGO2Q562F6 1265 aa5.97□□□□□ -1.45
SCN1A-209ENST00000635750 DDX53Q86TM3 631 aaKnown RBP5.97□□□□□ -1.45
SCN1A-209ENST00000635750 CCDC24Q8N4L8 307 aa5.97□□□□□ -1.45
SCN1A-209ENST00000635750 MED4Q9NPJ6 270 aa5.97□□□□□ -1.45
SCN1A-209ENST00000635750 DNAJC17Q9NVM6 304 aaKnown RBP5.97□□□□□ -1.45
SCN1A-209ENST00000635750 NXF1Q9UBU9 619 aaKnown RBP5.97□□□□□ -1.45
SCN1A-209ENST00000635750 PCDHGB4Q9UN71 923 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms