RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 C12orf60Q5U649 245 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 PPP1R13LQ8WUF5 828 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 SLF1Q9BQI6 1058 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 TEX13BQ9BXU2 312 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 FAM184BQ9ULE4 1060 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 AK5Q9Y6K8 562 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 TMEM265A0A087WTH1 108 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.65□□□□□ -1.5
LINC00550-201ENST00000629293 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.65□□□□□ -1.5
LINC00550-201ENST00000629293 TCRBV5S4A2TA0A5A2 114 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 F5H6K3 240 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 CDK2AP1O14519 115 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 NR3C2P08235 984 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 FGRP09769 529 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 CYP2C18P33260 490 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 SNAP25P60880 206 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 SMAD3P84022 425 aaKnown RBP5.65□□□□□ -1.5
LINC00550-201ENST00000629293 KLRC3Q07444 240 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 ORC1Q13415 861 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 CXCL17Q6UXB2 119 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 NYAP1Q6ZVC0 841 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 MCF2L2Q86YR7 1114 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 ZNF444Q8N0Y2 327 aaPredicted RBP5.65□□□□□ -1.5
LINC00550-201ENST00000629293 USP26Q9BXU7 913 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 ATP8A2Q9NTI2 1148 aa5.65□□□□□ -1.5
LINC00550-201ENST00000629293 ZNF214Q9UL59 606 aaPredicted RBP5.65□□□□□ -1.5
LINC00550-201ENST00000629293 SYNRGQ9UMZ2 1314 aa5.65□□□□□ -1.51
LINC00550-201ENST00000629293 OPLAHO14841 1288 aa5.65□□□□□ -1.51
LINC00550-201ENST00000629293 ZBED4O75132 1171 aa5.65□□□□□ -1.51
LINC00550-201ENST00000629293 NDUFB10O96000 172 aa5.65□□□□□ -1.51
LINC00550-201ENST00000629293 ASGR1P07306 291 aa5.65□□□□□ -1.51
LINC00550-201ENST00000629293 ZNF76P36508 570 aa5.65□□□□□ -1.51
LINC00550-201ENST00000629293 CNTN2Q02246 1040 aa5.65□□□□□ -1.51
LINC00550-201ENST00000629293 FAAP100Q0VG06 881 aa5.65□□□□□ -1.51
LINC00550-201ENST00000629293 CCDC144BQ3MJ40 725 aa5.65□□□□□ -1.51
LINC00550-201ENST00000629293 CTR9Q6PD62 1173 aa5.65□□□□□ -1.51
LINC00550-201ENST00000629293 CLEC17AQ6ZS10 378 aa5.65□□□□□ -1.51
LINC00550-201ENST00000629293 ZNF365Q70YC5 407 aa5.65□□□□□ -1.51
LINC00550-201ENST00000629293 RIOX2Q8IUF8 465 aa5.65□□□□□ -1.51
LINC00550-201ENST00000629293 CERS4Q9HA82 394 aa5.65□□□□□ -1.51
LINC00550-201ENST00000629293 IL21Q9HBE4 155 aa5.65□□□□□ -1.51
LINC00550-201ENST00000629293 TOMM22Q9NS69 142 aa5.65□□□□□ -1.51
LINC00550-201ENST00000629293 PHF24Q9UPV7 400 aa5.65□□□□□ -1.51
LINC00550-201ENST00000629293 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.65□□□□□ -1.51
LINC00550-201ENST00000629293 ZDBF2Q9HCK1 2354 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 ZNF865P0CJ78 1059 aaPredicted RBP5.64□□□□□ -1.51
LINC00550-201ENST00000629293 RABEP1Q15276 862 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 CCDC174Q6PII3 467 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 C16orf86Q6ZW13 317 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 VASH1Q7L8A9 365 aaPredicted RBP5.64□□□□□ -1.51
LINC00550-201ENST00000629293 NOP9Q86U38 636 aaKnown RBP5.64□□□□□ -1.51
LINC00550-201ENST00000629293 ABRAQ8N0Z2 381 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 STX8Q9UNK0 236 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 RIF1Q5UIP0 2472 aaKnown RBP5.64□□□□□ -1.51
LINC00550-201ENST00000629293 TMEM232C9JQI7 657 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 ALAS1P13196 640 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 ACVR2BQ13705 512 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 ZNF792Q3KQV3 632 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 FAM47CQ5HY64 1035 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 EGFLAMQ63HQ2 1017 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 NSMFQ6X4W1 530 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 SLC28A3Q9HAS3 691 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 RBAK-RBAKDNI3L0D1 243 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 DYNC1LI2O43237 492 aaPredicted RBP5.64□□□□□ -1.51
LINC00550-201ENST00000629293 SNAI1O95863 264 aaPredicted RBP5.64□□□□□ -1.51
LINC00550-201ENST00000629293 RABGGTBP53611 331 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 PDE1AP54750 535 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 WNT7BP56706 349 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 PSMD2Q13200 908 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 ALKBH2Q6NS38 261 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 ARMCX2Q7L311 632 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 CCDC144CPQ8IYA2 1237 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 PRPF38AQ8NAV1 312 aaKnown RBP5.64□□□□□ -1.51
LINC00550-201ENST00000629293 TNPO1Q92973 898 aaKnown RBP5.64□□□□□ -1.51
LINC00550-201ENST00000629293 CRELD1Q96HD1 420 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 NECAB3Q96P71 396 aaPredicted RBP5.64□□□□□ -1.51
LINC00550-201ENST00000629293 PBX4Q9BYU1 374 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 OSBPL7Q9BZF2 842 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 RAB6BQ9NRW1 208 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 PCDHGB7Q9Y5F8 929 aa5.64□□□□□ -1.51
LINC00550-201ENST00000629293 BAZ2AQ9UIF9 1905 aaKnown RBP5.63□□□□□ -1.51
LINC00550-201ENST00000629293 KIAA0355O15063 1070 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 ADCY6O43306 1168 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 ADAMTS4O75173 837 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 TSPY3P0CV98 308 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 TSPY8P0CW00 308 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 MCCP23508 829 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 FSHRP23945 695 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 MZF1P28698 734 aaPredicted RBP5.63□□□□□ -1.51
LINC00550-201ENST00000629293 PSMA6P60900 246 aaKnown RBP5.63□□□□□ -1.51
LINC00550-201ENST00000629293 SNX17Q15036 470 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 TEAD4Q15561 434 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 ALG1LQ6GMV1 187 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 DEFB128Q7Z7B8 93 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 TMEM199Q8N511 208 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 IL17RAQ96F46 866 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 CEP95Q96GE4 821 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 LRRCC1Q9C099 1032 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 MSRAQ9UJ68 235 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 UMODL1Q5DID0 1318 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms