RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 COL4A3BPQ9Y5P4 624 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 ABCB11O95342 1321 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 SIPA1L1O43166 1804 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 A0A1W2PRG0 241 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 FAM86B1E9PN63 330 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 MEIS1O00470 390 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 FAM86B2P0C5J1 330 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 HOXA13P31271 388 aaPredicted RBP13.26□□□□□ -0.29
TP53-227ENST00000622645 EIF4A3P38919 411 aaKnown RBP13.26□□□□□ -0.29
TP53-227ENST00000622645 VAV2P52735 878 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 PSMC6P62333 389 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 SMC1AQ14683 1233 aaKnown RBP13.26□□□□□ -0.29
TP53-227ENST00000622645 CCDC40Q4G0X9 1142 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 ARSHQ5FYA8 562 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 PAPD7Q5XG87 772 aaKnown RBP13.26□□□□□ -0.29
TP53-227ENST00000622645 CATSPER3Q86XQ3 398 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 CCDC65Q8IXS2 484 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 ETNPPLQ8TBG4 499 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 MBOAT7Q96N66 472 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 UBXN6Q9BZV1 441 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 ABCB6Q9NP58 842 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 KRT18P05783 430 aaKnown RBP13.26□□□□□ -0.29
TP53-227ENST00000622645 HMGB2P26583 209 aaKnown RBP13.26□□□□□ -0.29
TP53-227ENST00000622645 KIF11P52732 1056 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 SPIRE1Q08AE8 756 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 FBXO11Q86XK2 927 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 EHBP1Q8NDI1 1231 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 FLAD1Q8NFF5 587 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 CYP2W1Q8TAV3 490 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 SCFD1Q8WVM8 642 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 BAP1Q92560 729 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 IFIH1Q9BYX4 1025 aaKnown RBP13.26□□□□□ -0.29
TP53-227ENST00000622645 POTEB2H3BUK9 544 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 ZNF185O15231 689 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 FKBP1AP62942 108 aaKnown RBP13.25□□□□□ -0.29
TP53-227ENST00000622645 APBA1Q02410 837 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 AP3B2Q13367 1082 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 SLFN12Q8IYM2 578 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 HNRNPLLQ8WVV9 542 aaKnown RBP13.25□□□□□ -0.29
TP53-227ENST00000622645 LENG9Q96B70 501 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 IQCDQ96DY2 449 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 CRACR2AQ9BSW2 395 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 DEF6Q9H4E7 631 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 NLRC4Q9NPP4 1024 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 EMILIN3Q9NT22 766 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 PCDHA13Q9Y5I0 950 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 SPDYE3A6NKU9 549 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 OPLAHO14841 1288 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 AKR1B10O60218 316 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 BMP3P12645 472 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 SLC12A3P55017 1021 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 TUBB4BP68371 445 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 PABPC4Q13310 644 aaKnown RBP eCLIP13.25□□□□□ -0.29
TP53-227ENST00000622645 SYDE2Q5VT97 1194 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 CACNA2D4Q7Z3S7 1137 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 GMCL1P1Q8NEA9 526 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 NEK11Q8NG66 645 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 SECISBP2LQ93073 1101 aaKnown RBP13.25□□□□□ -0.29
TP53-227ENST00000622645 GMCL1Q96IK5 515 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 PURBQ96QR8 312 aaKnown RBP13.25□□□□□ -0.29
TP53-227ENST00000622645 CSRNP1Q96S65 589 aa13.25□□□□□ -0.29
TP53-227ENST00000622645 ARFGEF1Q9Y6D6 1849 aa13.24□□□□□ -0.29
TP53-227ENST00000622645 MAP2K7O14733 419 aa13.24□□□□□ -0.29
TP53-227ENST00000622645 SPATA31C1P0DKV0 1188 aa13.24□□□□□ -0.29
TP53-227ENST00000622645 OAS2P29728 719 aaKnown RBP13.24□□□□□ -0.29
TP53-227ENST00000622645 CASP5P51878 434 aa13.24□□□□□ -0.29
TP53-227ENST00000622645 RBM26Q5T8P6 1007 aaKnown RBP13.24□□□□□ -0.29
TP53-227ENST00000622645 STYK1Q6J9G0 422 aa13.24□□□□□ -0.29
TP53-227ENST00000622645 KCTD10Q9H3F6 313 aa13.24□□□□□ -0.29
TP53-227ENST00000622645 MLXIPQ9HAP2 919 aa13.24□□□□□ -0.29
TP53-227ENST00000622645 POLD4Q9HCU8 107 aa13.24□□□□□ -0.29
TP53-227ENST00000622645 JADE2Q9NQC1 790 aa13.24□□□□□ -0.29
TP53-227ENST00000622645 CAPN6Q9Y6Q1 641 aa13.24□□□□□ -0.29
TP53-227ENST00000622645 SLX4Q8IY92 1834 aa13.24□□□□□ -0.29
TP53-227ENST00000622645 NPM3O75607 178 aaKnown RBP13.24□□□□□ -0.29
TP53-227ENST00000622645 ECE1P42892 770 aa13.24□□□□□ -0.29
TP53-227ENST00000622645 CYP4A11Q02928 519 aa13.24□□□□□ -0.29
TP53-227ENST00000622645 FOXR2Q6PJQ5 311 aa13.24□□□□□ -0.29
TP53-227ENST00000622645 SLC30A10Q6XR72 485 aa13.24□□□□□ -0.29
TP53-227ENST00000622645 DRC1Q96MC2 740 aa13.24□□□□□ -0.29
TP53-227ENST00000622645 YDJCA8MPS7 323 aa13.23□□□□□ -0.29
TP53-227ENST00000622645 PDE2AO00408 941 aaPredicted RBP13.23□□□□□ -0.29
TP53-227ENST00000622645 GFPT1Q06210 699 aaPredicted RBP13.23□□□□□ -0.29
TP53-227ENST00000622645 HAUS3Q68CZ6 603 aa13.23□□□□□ -0.29
TP53-227ENST00000622645 MOXD1Q6UVY6 613 aa13.23□□□□□ -0.29
TP53-227ENST00000622645 ANKRD13CQ8N6S4 541 aa13.23□□□□□ -0.29
TP53-227ENST00000622645 BCAS3Q9H6U6 928 aa13.23□□□□□ -0.29
TP53-227ENST00000622645 L1RE1Q9UN81 338 aa13.23□□□□□ -0.29
TP53-227ENST00000622645 TCP10L2B9ZVM9 353 aa13.23□□□□□ -0.29
TP53-227ENST00000622645 ERLIN1O75477 346 aa13.23□□□□□ -0.29
TP53-227ENST00000622645 NOL4O94818 638 aa13.23□□□□□ -0.29
TP53-227ENST00000622645 MOCS3O95396 460 aa13.23□□□□□ -0.29
TP53-227ENST00000622645 HOXA7P31268 230 aaPredicted RBP13.23□□□□□ -0.29
TP53-227ENST00000622645 SREBF1P36956 1147 aa13.23□□□□□ -0.29
TP53-227ENST00000622645 ADAM9Q13443 819 aa13.23□□□□□ -0.29
TP53-227ENST00000622645 Q4G0T1 1027 aa13.23□□□□□ -0.29
TP53-227ENST00000622645 PDXDC1Q6P996 788 aa13.23□□□□□ -0.29
TP53-227ENST00000622645 C7orf43Q8WVR3 580 aa13.23□□□□□ -0.29
TP53-227ENST00000622645 SH2D4AQ9H788 454 aa13.23□□□□□ -0.29
TP53-227ENST00000622645 PRR12Q9ULL5 1215 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms