RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 PRPF6O94906 941 aaKnown RBP4.81□□□□□ -1.64
SEC22B-202ENST00000618538 SYF2O95926 243 aaKnown RBP4.81□□□□□ -1.64
SEC22B-202ENST00000618538 SNHG28P0DPA3 235 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 TRIM21P19474 475 aaKnown RBP4.81□□□□□ -1.64
SEC22B-202ENST00000618538 HNRNPH3P31942 346 aaKnown RBP4.81□□□□□ -1.64
SEC22B-202ENST00000618538 MRPS25P82663 173 aaKnown RBP4.81□□□□□ -1.64
SEC22B-202ENST00000618538 ZBED6P86452 979 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 TBC1D8BQ0IIM8 1120 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 TMEM119Q4V9L6 283 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 ZCWPW2Q504Y3 356 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 COBLL1Q53SF7 1204 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 MFSD14BQ5SR56 506 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 TTBK2Q6IQ55 1244 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 FAM196AQ6ZSG2 479 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 DYMQ7RTS9 669 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 ZNF804AQ7Z570 1209 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 REXO1Q8N1G1 1221 aaKnown RBP4.81□□□□□ -1.64
SEC22B-202ENST00000618538 CNBD1Q8NA66 436 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 COG1Q8WTW3 980 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 RIN2Q8WYP3 895 aaPredicted RBP4.81□□□□□ -1.64
SEC22B-202ENST00000618538 HAS1Q92839 578 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 AK8Q96MA6 479 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 GDAP1L1Q96MZ0 367 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 P2RX7Q99572 595 aaKnown RBP4.81□□□□□ -1.64
SEC22B-202ENST00000618538 EIF3CQ99613 913 aaKnown RBP4.81□□□□□ -1.64
SEC22B-202ENST00000618538 CUEDC2Q9H467 287 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 FAM207AQ9NSI2 230 aaPredicted RBP4.81□□□□□ -1.64
SEC22B-202ENST00000618538 VPS18Q9P253 973 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 LRWD1Q9UFC0 647 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 LCMT1Q9UIC8 334 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 QSER1Q2KHR3 1735 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 NRXN2Q9P2S2 1712 aa4.81□□□□□ -1.64
SEC22B-202ENST00000618538 A0A1W2PQJ5 194 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 AGPSO00116 658 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 NCK2O43639 380 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 TLR2O60603 784 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 PHACTR2O75167 634 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 NOL4O94818 638 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 BAG3O95817 575 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 GYS1P13807 737 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 MTIF2P46199 727 aaKnown RBP4.8□□□□□ -1.64
SEC22B-202ENST00000618538 CLK2P49760 499 aaKnown RBP4.8□□□□□ -1.64
SEC22B-202ENST00000618538 VAV2P52735 878 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 PIP4K2BP78356 416 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 GSTO1P78417 241 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 DDR1Q08345 913 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 C2orf54Q08AI8 447 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 FOXC1Q12948 553 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 TUBB2AQ13885 445 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 ASTE1Q2TB18 679 aaPredicted RBP4.8□□□□□ -1.64
SEC22B-202ENST00000618538 FIGNQ5HY92 759 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 HGSNATQ68CP4 663 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 HDXQ7Z353 690 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 TMC4Q7Z404 712 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 CREG2Q8IUH2 290 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 MSL3Q8N5Y2 521 aaKnown RBP4.8□□□□□ -1.64
SEC22B-202ENST00000618538 ANKRD20A12PQ8NF67 263 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 TBC1D16Q8TBP0 767 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 DNAJC19Q96DA6 116 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 RRP36Q96EU6 259 aaKnown RBP4.8□□□□□ -1.64
SEC22B-202ENST00000618538 TRERF1Q96PN7 1200 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 LZTS2Q9BRK4 669 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 TUBB2BQ9BVA1 445 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 NOC4LQ9BVI4 516 aaKnown RBP4.8□□□□□ -1.64
SEC22B-202ENST00000618538 BCAS3Q9H6U6 928 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 SH2D4AQ9H788 454 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 KANSL2Q9H9L4 492 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 JMJD4Q9H9V9 463 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 MAGEF1Q9HAY2 307 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 MTMR4Q9NYA4 1195 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 PLAGL2Q9UPG8 496 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 SAR1BQ9Y6B6 198 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 ANKRD31Q8N7Z5 1873 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.8□□□□□ -1.64
SEC22B-202ENST00000618538 NPHP3-ACAD11A0A0J9YXS1 232 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 LRRC53A6NM62 1247 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 MOCS3O95396 460 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 LCA5LO95447 670 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 TAL1P17542 331 aaPredicted RBP4.8□□□□□ -1.64
SEC22B-202ENST00000618538 SHMT1P34896 483 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 RFC4P35249 363 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 SLC16A2P36021 539 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 EIF4A3P38919 411 aaKnown RBP4.8□□□□□ -1.64
SEC22B-202ENST00000618538 LMAN1P49257 510 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 KIF11P52732 1056 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 CDK17Q00537 523 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 RAD51AP2Q09MP3 1159 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 PICALMQ13492 652 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 STIM1Q13586 685 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 CALCRLQ16602 461 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 VWA3BQ502W6 1294 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 MUM1L1Q5H9M0 696 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 NFRKBQ6P4R8 1299 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 DPP8Q6V1X1 898 aaPredicted RBP4.8□□□□□ -1.64
SEC22B-202ENST00000618538 UNC13DQ70J99 1090 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 ZFPM1Q8IX07 1006 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 NOC3LQ8WTT2 800 aaKnown RBP4.8□□□□□ -1.64
SEC22B-202ENST00000618538 LARP4BQ92615 738 aaKnown RBP4.8□□□□□ -1.64
SEC22B-202ENST00000618538 RAD54LQ92698 747 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 EXOC4Q96A65 974 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms