RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 WRAP73Q9P2S5 460 aaPredicted RBP8.71□□□□□ -1.02
NEK3-207ENST00000617054 AFG3L2Q9Y4W6 797 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 PLA2G4BP0C869 781 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 CDC25BP30305 580 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 BAATQ14032 418 aaPredicted RBP8.71□□□□□ -1.02
NEK3-207ENST00000617054 TMEM119Q4V9L6 283 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 LRCH2Q5VUJ6 765 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 DPY19L2Q6NUT2 758 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 APTXQ7Z2E3 356 aaKnown RBP8.71□□□□□ -1.02
NEK3-207ENST00000617054 SLFN12Q8IYM2 578 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 GIMAP8Q8ND71 665 aaPredicted RBP8.71□□□□□ -1.02
NEK3-207ENST00000617054 SYTL5Q8TDW5 730 aaPredicted RBP8.71□□□□□ -1.02
NEK3-207ENST00000617054 MBOAT7Q96N66 472 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 ZNF577Q9BSK1 485 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 RMND1Q9NWS8 449 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 VAV3Q9UKW4 847 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 SNCAIPQ9Y6H5 919 aa8.71□□□□□ -1.02
NEK3-207ENST00000617054 ZNF500O60304 480 aaPredicted RBP8.7□□□□□ -1.02
NEK3-207ENST00000617054 PLA2G6O60733 806 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 ZBED4O75132 1171 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 USP14P54578 494 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 MRPS9P82933 396 aaKnown RBP8.7□□□□□ -1.02
NEK3-207ENST00000617054 ORC2Q13416 577 aaPredicted RBP8.7□□□□□ -1.02
NEK3-207ENST00000617054 ARSHQ5FYA8 562 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 OTOP1Q7RTM1 612 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 GPBP1Q86WP2 473 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 IRF2BP1Q8IU81 584 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 TRIM47Q96LD4 638 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 EIF2AK1Q9BQI3 630 aaKnown RBP8.7□□□□□ -1.02
NEK3-207ENST00000617054 BHMT2Q9H2M3 363 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 BMP2KQ9NSY1 1161 aaPredicted RBP8.7□□□□□ -1.02
NEK3-207ENST00000617054 RWDD2AQ9UIY3 292 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 TELO2Q9Y4R8 837 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 RSPH10B2B2RC85 870 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 TRAF5O00463 557 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 RSPH10BP0C881 870 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 CIITAP33076 1130 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 EPHX2P34913 555 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 AMPD3Q01432 767 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 KRT31Q15323 416 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 MAEAQ7L5Y9 396 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 NELFCDQ8IXH7 590 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 BANK1Q8NDB2 785 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 DYDC2Q96IM9 177 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 RMDN3Q96TC7 470 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 AS3MTQ9HBK9 375 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 KCNH7Q9NS40 1196 aa8.7□□□□□ -1.02
NEK3-207ENST00000617054 TMEM150BA6NC51 233 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 IPO5O00410 1097 aaKnown RBP8.69□□□□□ -1.02
NEK3-207ENST00000617054 GAS7O60861 476 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 ATP9AO75110 1047 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 SLITRK3O94933 977 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 KRT18P05783 430 aaKnown RBP8.69□□□□□ -1.02
NEK3-207ENST00000617054 HSD17B4P51659 736 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 MAP3K9P80192 1104 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 CCZ1BP86790 482 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 CCZ1P86791 482 aaPredicted RBP8.69□□□□□ -1.02
NEK3-207ENST00000617054 SP4Q02446 784 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 COG2Q14746 738 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 NR1I3Q14994 352 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 GADL1Q6ZQY3 521 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 RNF207Q6ZRF8 634 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 VSTM4Q8IW00 320 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 DNAJC19Q96DA6 116 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 FAM212AQ96EL1 285 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 IKZF4Q9H2S9 585 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 SEMA6BQ9H3T3 888 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 UNC45AQ9H3U1 944 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 RNF146Q9NTX7 359 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 TMOD4Q9NZQ9 345 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 CLEC11AQ9Y240 323 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 KCNJ18B7U540 433 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 PPP1R12BO60237 982 aaPredicted RBP8.69□□□□□ -1.02
NEK3-207ENST00000617054 CYP3A4P08684 503 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 FSTL1Q12841 308 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 KCNJ12Q14500 433 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 KCNB1Q14721 858 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 CDKAL1Q5VV42 579 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 C16orf45Q96MC5 204 aaPredicted RBP8.69□□□□□ -1.02
NEK3-207ENST00000617054 DUSP9Q99956 384 aaKnown RBP8.69□□□□□ -1.02
NEK3-207ENST00000617054 CUEDC2Q9H467 287 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 PANK4Q9NVE7 773 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 ZNF214Q9UL59 606 aaPredicted RBP8.69□□□□□ -1.02
NEK3-207ENST00000617054 R3HCC1Q9Y3T6 440 aaKnown RBP8.69□□□□□ -1.02
NEK3-207ENST00000617054 SAMM50Q9Y512 469 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 DICER1Q9UPY3 1922 aaKnown RBP8.69□□□□□ -1.02
NEK3-207ENST00000617054 N4BP3O15049 544 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 PSMD10O75832 226 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 CYP11B2P19099 503 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 DSG3P32926 999 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 HERC4Q5GLZ8 1057 aaPredicted RBP8.69□□□□□ -1.02
NEK3-207ENST00000617054 TCP11X2Q5H9J9 407 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 MAP1SQ66K74 1059 aaPredicted RBP8.69□□□□□ -1.02
NEK3-207ENST00000617054 CATSPERGQ6ZRH7 1159 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 CSGALNACT2Q8N6G5 542 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 PAGR1Q9BTK6 254 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 STK17AQ9UEE5 414 aa8.69□□□□□ -1.02
NEK3-207ENST00000617054 SPDYE16A6NNV3 312 aaPredicted RBP8.68□□□□□ -1.02
NEK3-207ENST00000617054 RNF225M0QZC1 329 aaPredicted RBP8.68□□□□□ -1.02
NEK3-207ENST00000617054 PSMA7O14818 248 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms