RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 AMFRQ9UKV5 643 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 CCDC189A1A4V9 331 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 TCP11X1B4DZS4 312 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 ACSL3O95573 720 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 KRT79Q5XKE5 535 aa17.06■□□□□ 0.32
SYNRG-223ENST00000616179 NOC2LQ9Y3T9 749 aaKnown RBP17.06■□□□□ 0.32
SYNRG-223ENST00000616179 CEMIPQ8WUJ3 1361 aa17.05■□□□□ 0.32
SYNRG-223ENST00000616179 HERC4Q5GLZ8 1057 aaPredicted RBP17.05■□□□□ 0.32
SYNRG-223ENST00000616179 FAM83BQ5T0W9 1011 aa17.05■□□□□ 0.32
SYNRG-223ENST00000616179 SAMD1Q6SPF0 538 aaPredicted RBP17.05■□□□□ 0.32
SYNRG-223ENST00000616179 PLAGL2Q9UPG8 496 aa17.05■□□□□ 0.32
SYNRG-223ENST00000616179 WDR19Q8NEZ3 1342 aa17.05■□□□□ 0.32
SYNRG-223ENST00000616179 EPHB6O15197 1021 aa17.05■□□□□ 0.32
SYNRG-223ENST00000616179 CIAO1O76071 339 aa17.05■□□□□ 0.32
SYNRG-223ENST00000616179 EVA1CP58658 441 aa17.05■□□□□ 0.32
SYNRG-223ENST00000616179 RCSD1Q6JBY9 416 aa17.05■□□□□ 0.32
SYNRG-223ENST00000616179 CEP120Q8N960 986 aa17.05■□□□□ 0.32
SYNRG-223ENST00000616179 RAB34Q9BZG1 259 aa17.05■□□□□ 0.32
SYNRG-223ENST00000616179 EPB41L4AQ9HCS5 686 aaPredicted RBP17.05■□□□□ 0.32
SYNRG-223ENST00000616179 THRAP3Q9Y2W1 955 aaKnown RBP17.05■□□□□ 0.32
SYNRG-223ENST00000616179 MRPL12P52815 198 aaKnown RBP17.05■□□□□ 0.32
SYNRG-223ENST00000616179 SLC8A3P57103 927 aa17.05■□□□□ 0.32
SYNRG-223ENST00000616179 IRF2BP1Q8IU81 584 aa17.05■□□□□ 0.32
SYNRG-223ENST00000616179 DCAF5Q96JK2 942 aa17.05■□□□□ 0.32
SYNRG-223ENST00000616179 ZC3H4Q9UPT8 1303 aaKnown RBP17.04■□□□□ 0.32
SYNRG-223ENST00000616179 hCG_2014768A0A024R1R8 64 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 RASGRF2O14827 1237 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 PRPF3O43395 683 aaKnown RBP17.04■□□□□ 0.32
SYNRG-223ENST00000616179 USP38Q8NB14 1042 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 SNX29Q8TEQ0 813 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 ABCF3Q9NUQ8 709 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 CNOT8Q9UFF9 292 aaKnown RBP17.04■□□□□ 0.32
SYNRG-223ENST00000616179 DLC1Q96QB1 1528 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 PIK3C2BO00750 1634 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 TNNI2P48788 182 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 LRRC23Q53EV4 343 aaPredicted RBP17.04■□□□□ 0.32
SYNRG-223ENST00000616179 CAPN12Q6ZSI9 719 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 ZNF444Q8N0Y2 327 aaPredicted RBP17.04■□□□□ 0.32
SYNRG-223ENST00000616179 ENAHQ8N8S7 591 aaPredicted RBP17.04■□□□□ 0.32
SYNRG-223ENST00000616179 PPFIBP2Q8ND30 876 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 GSG1L2A8MUP6 293 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 SERPING1P05155 500 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 H2AFZP0C0S5 128 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 PHKG2P15735 406 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 PDE6CP51160 858 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 H2AFVQ71UI9 128 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 ORAI2Q96SN7 254 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 ISCUQ9H1K1 167 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 CPVLQ9H3G5 476 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 FAM114A2Q9NRY5 505 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 ETAA1Q9NY74 926 aa17.04■□□□□ 0.32
SYNRG-223ENST00000616179 JCADQ9P266 1359 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 CFAP73A6NFT4 308 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 FLOT1O75955 427 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 FGFR4P22455 802 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 MSH2P43246 934 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 PAPOLBQ9NRJ5 636 aaKnown RBP17.03■□□□□ 0.32
SYNRG-223ENST00000616179 MCM9Q9NXL9 1143 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 NQO1P15559 274 aaKnown RBP17.03■□□□□ 0.32
SYNRG-223ENST00000616179 ALDH5A1P51649 535 aaPredicted RBP17.03■□□□□ 0.32
SYNRG-223ENST00000616179 PDXDC2PQ6P474 469 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 TRMT1LQ7Z2T5 733 aaKnown RBP17.03■□□□□ 0.32
SYNRG-223ENST00000616179 ERICH1Q86X53 443 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 SPATA20Q8TB22 786 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 P3H4Q92791 437 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 DLGAP2Q9P1A6 1054 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 BIN2Q9UBW5 565 aaPredicted RBP17.03■□□□□ 0.32
SYNRG-223ENST00000616179 ASIC3Q9UHC3 531 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 SALL4Q9UJQ4 1053 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 OVOS2A0A0G2JMS6 1433 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 RASSF10A6NK89 507 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 A8MUI8 341 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 ITGA4P13612 1032 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 PUM3Q15397 648 aaKnown RBP17.03■□□□□ 0.32
SYNRG-223ENST00000616179 TXNRD1Q16881 649 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 TEKT4Q8WW24 435 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 STMN2Q93045 179 aa17.03■□□□□ 0.32
SYNRG-223ENST00000616179 PDE8BO95263 885 aa17.02■□□□□ 0.32
SYNRG-223ENST00000616179 DYNLL1P63167 89 aaKnown RBP17.02■□□□□ 0.32
SYNRG-223ENST00000616179 DR1Q01658 176 aa17.02■□□□□ 0.32
SYNRG-223ENST00000616179 TTI2Q6NXR4 508 aa17.02■□□□□ 0.32
SYNRG-223ENST00000616179 ALKBH5Q6P6C2 394 aaKnown RBP17.02■□□□□ 0.32
SYNRG-223ENST00000616179 TMEM154Q6P9G4 183 aa17.02■□□□□ 0.32
SYNRG-223ENST00000616179 SH3RF1Q7Z6J0 888 aa17.02■□□□□ 0.32
SYNRG-223ENST00000616179 RAB3IPQ96QF0 476 aaPredicted RBP17.02■□□□□ 0.32
SYNRG-223ENST00000616179 PHF20Q9BVI0 1012 aa17.02■□□□□ 0.32
SYNRG-223ENST00000616179 FOXP2O15409 715 aa17.02■□□□□ 0.32
SYNRG-223ENST00000616179 HLFQ16534 295 aa17.02■□□□□ 0.32
SYNRG-223ENST00000616179 MYOCDQ8IZQ8 938 aa17.02■□□□□ 0.32
SYNRG-223ENST00000616179 GDF3Q9NR23 364 aa17.02■□□□□ 0.32
SYNRG-223ENST00000616179 AXIN2Q9Y2T1 843 aa17.02■□□□□ 0.32
SYNRG-223ENST00000616179 ORC4O43929 436 aa17.02■□□□□ 0.31
SYNRG-223ENST00000616179 FLT3P36888 993 aa17.02■□□□□ 0.31
SYNRG-223ENST00000616179 WLSQ5T9L3 541 aa17.02■□□□□ 0.31
SYNRG-223ENST00000616179 TMED8Q6PL24 325 aaPredicted RBP17.02■□□□□ 0.31
SYNRG-223ENST00000616179 TATDN2Q93075 761 aa17.02■□□□□ 0.31
SYNRG-223ENST00000616179 NUDCD1Q96RS6 583 aa17.02■□□□□ 0.31
SYNRG-223ENST00000616179 TMEM60Q9H2L4 133 aa17.02■□□□□ 0.31
SYNRG-223ENST00000616179 KDM4CQ9H3R0 1056 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms