RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 RAD51AP2Q09MP3 1159 aa21.29■■□□□ 1
MMP28-204ENST00000615136 SLF1Q9BQI6 1058 aa21.29■■□□□ 1
MMP28-204ENST00000615136 THAP9Q9H5L6 903 aa21.29■■□□□ 1
MMP28-204ENST00000615136 COL20A1Q9P218 1284 aa21.29■■□□□ 1
MMP28-204ENST00000615136 CCPG1Q9ULG6 757 aa21.29■■□□□ 1
MMP28-204ENST00000615136 ABCB11O95342 1321 aa21.28■■□□□ 1
MMP28-204ENST00000615136 ICAM1P05362 532 aa21.28■■□□□ 1
MMP28-204ENST00000615136 VCAM1P19320 739 aa21.28■■□□□ 1
MMP28-204ENST00000615136 HIRAP54198 1017 aaPredicted RBP21.28■■□□□ 1
MMP28-204ENST00000615136 COBLL1Q53SF7 1204 aa21.28■■□□□ 1
MMP28-204ENST00000615136 CPXCR1Q8N123 301 aa21.28■■□□□ 1
MMP28-204ENST00000615136 HOOK2Q96ED9 719 aa21.28■■□□□ 1
MMP28-204ENST00000615136 FAM20AQ96MK3 541 aa21.28■■□□□ 1
MMP28-204ENST00000615136 DOCK1Q14185 1865 aa21.28■■□□□ 1
MMP28-204ENST00000615136 SPDYE4A6NLX3 237 aa21.28■■□□□ 1
MMP28-204ENST00000615136 TADA3O75528 432 aa21.28■■□□□ 1
MMP28-204ENST00000615136 CASQ1P31415 396 aa21.28■■□□□ 1
MMP28-204ENST00000615136 EPS15P42566 896 aa21.28■■□□□ 1
MMP28-204ENST00000615136 COASYQ13057 564 aa21.28■■□□□ 1
MMP28-204ENST00000615136 TRAF1Q13077 416 aa21.28■■□□□ 1
MMP28-204ENST00000615136 SPP2Q13103 211 aa21.28■■□□□ 1
MMP28-204ENST00000615136 ARSHQ5FYA8 562 aa21.28■■□□□ 1
MMP28-204ENST00000615136 ARHGAP27Q6ZUM4 889 aa21.28■■□□□ 1
MMP28-204ENST00000615136 PRPF38AQ8NAV1 312 aaKnown RBP21.28■■□□□ 1
MMP28-204ENST00000615136 CLEC4DQ8WXI8 215 aa21.28■■□□□ 1
MMP28-204ENST00000615136 TANGO6Q9C0B7 1094 aa21.28■■□□□ 1
MMP28-204ENST00000615136 RAVER2Q9HCJ3 691 aaKnown RBP21.28■■□□□ 1
MMP28-204ENST00000615136 GPRC5DQ9NZD1 345 aa21.28■■□□□ 1
MMP28-204ENST00000615136 CYP11B2P19099 503 aa21.27■■□□□ 1
MMP28-204ENST00000615136 CYP4A11Q02928 519 aa21.27■■□□□ 1
MMP28-204ENST00000615136 CENPPQ6IPU0 288 aa21.27■■□□□ 1
MMP28-204ENST00000615136 GPBP1Q86WP2 473 aa21.27■■□□□ 1
MMP28-204ENST00000615136 LPAR1Q92633 364 aa21.27■■□□□ 1
MMP28-204ENST00000615136 WNK4Q96J92 1243 aa21.27■■□□□ 1
MMP28-204ENST00000615136 TBC1D7Q9P0N9 293 aa21.27■■□□□ 1
MMP28-204ENST00000615136 SLC12A3P55017 1021 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 MAP3K9P80192 1104 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 DLK2Q6UY11 383 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 ABHD10Q9NUJ1 306 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 GGA3Q9NZ52 723 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 RGL1Q9NZL6 768 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 MRFAP1Q9Y605 127 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 EFCAB8A8MWE9 144 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 FLOT1O75955 427 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 EEF1GP26641 437 aaKnown RBP21.26■□□□□ 0.99
MMP28-204ENST00000615136 RPA1P27694 616 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 UBXN1Q04323 297 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 MUM1L1Q5H9M0 696 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 MNS1Q8NEH6 495 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 ZNF507Q8TCN5 953 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 WRNIP1Q96S55 665 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 HOMER2Q9NSB8 354 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 PANK4Q9NVE7 773 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 ZNF112Q9UJU3 913 aa21.26■□□□□ 0.99
MMP28-204ENST00000615136 RBBP6Q7Z6E9 1792 aaKnown RBP21.25■□□□□ 0.99
MMP28-204ENST00000615136 BICDL2A1A5D9 508 aa21.25■□□□□ 0.99
MMP28-204ENST00000615136 ARP10275 920 aa21.25■□□□□ 0.99
MMP28-204ENST00000615136 HSD17B4P51659 736 aa21.25■□□□□ 0.99
MMP28-204ENST00000615136 PABPC4Q13310 644 aaKnown RBP eCLIP21.25■□□□□ 0.99
MMP28-204ENST00000615136 HAUS3Q68CZ6 603 aa21.25■□□□□ 0.99
MMP28-204ENST00000615136 TMTC1Q8IUR5 882 aa21.25■□□□□ 0.99
MMP28-204ENST00000615136 CNOT6LQ96LI5 555 aaKnown RBP21.25■□□□□ 0.99
MMP28-204ENST00000615136 RPAP3Q9H6T3 665 aaPredicted RBP21.25■□□□□ 0.99
MMP28-204ENST00000615136 SLC38A10Q9HBR0 1119 aa21.25■□□□□ 0.99
MMP28-204ENST00000615136 SSC5DA1L4H1 1573 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 LGALS16A8MUM7 142 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 PSMD10O75832 226 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 ALAS1P13196 640 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 OTOP1Q7RTM1 612 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 SCYL3Q8IZE3 742 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 GUF1Q8N442 669 aaKnown RBP21.24■□□□□ 0.99
MMP28-204ENST00000615136 IL31RAQ8NI17 732 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 NOC3LQ8WTT2 800 aaKnown RBP21.24■□□□□ 0.99
MMP28-204ENST00000615136 EIF2AK1Q9BQI3 630 aaKnown RBP21.24■□□□□ 0.99
MMP28-204ENST00000615136 CARD6Q9BX69 1037 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 GTPBP4Q9BZE4 634 aaKnown RBP21.24■□□□□ 0.99
MMP28-204ENST00000615136 LRRC27Q9C0I9 530 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 PCDHA2Q9Y5H9 948 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 B4DLN1 442 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 CHMP2AO43633 222 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 PTPRAP18433 802 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 CEP55Q53EZ4 464 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 MB21D1Q8N884 522 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 UBXN4Q92575 508 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 TUBGCP2Q9BSJ2 902 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 BCAS3Q9H6U6 928 aa21.24■□□□□ 0.99
MMP28-204ENST00000615136 POLR2AP24928 1970 aaKnown RBP21.23■□□□□ 0.99
MMP28-204ENST00000615136 PARP14Q460N5 1801 aa21.23■□□□□ 0.99
MMP28-204ENST00000615136 A0A1W2PQC6 194 aa21.23■□□□□ 0.99
MMP28-204ENST00000615136 ERVK-24P63145 666 aa21.23■□□□□ 0.99
MMP28-204ENST00000615136 ARHGAP29Q52LW3 1261 aa21.23■□□□□ 0.99
MMP28-204ENST00000615136 DCAF15Q66K64 600 aa21.23■□□□□ 0.99
MMP28-204ENST00000615136 SLC5A5Q92911 643 aa21.23■□□□□ 0.99
MMP28-204ENST00000615136 POLD4Q9HCU8 107 aa21.23■□□□□ 0.99
MMP28-204ENST00000615136 PPP1R9AQ9ULJ8 1098 aa21.23■□□□□ 0.99
MMP28-204ENST00000615136 DICER1Q9UPY3 1922 aaKnown RBP21.23■□□□□ 0.99
MMP28-204ENST00000615136 PES1O00541 588 aaKnown RBP21.22■□□□□ 0.99
MMP28-204ENST00000615136 PPP1R2P41236 205 aa21.22■□□□□ 0.99
MMP28-204ENST00000615136 CTTNQ14247 550 aaKnown RBP21.22■□□□□ 0.99
MMP28-204ENST00000615136 FAM26FQ5R3K3 315 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms