RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 MYMKA6NI61 221 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 H7C1D1 291 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 MEIS2O14770 477 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 CPP00450 1065 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 IBSPP21815 317 aaPredicted RBP18.26■□□□□ 0.51
CNOT3-208ENST00000613073 HNRNPH1P31943 449 aaKnown RBP18.26■□□□□ 0.51
CNOT3-208ENST00000613073 BAG6P46379 1132 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 SYDE2Q5VT97 1194 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 PSMD1Q99460 953 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 AMNQ9BXJ7 453 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 TMEM39BQ9GZU3 492 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 MED4Q9NPJ6 270 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 CEP83Q9Y592 693 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 PDIA5Q14554 519 aa18.25■□□□□ 0.51
CNOT3-208ENST00000613073 ZYXQ15942 572 aaKnown RBP18.25■□□□□ 0.51
CNOT3-208ENST00000613073 FBXO11Q86XK2 927 aa18.25■□□□□ 0.51
CNOT3-208ENST00000613073 CCDC47Q96A33 483 aaKnown RBP18.25■□□□□ 0.51
CNOT3-208ENST00000613073 GMCL1Q96IK5 515 aa18.25■□□□□ 0.51
CNOT3-208ENST00000613073 GMLQ99445 158 aa18.25■□□□□ 0.51
CNOT3-208ENST00000613073 GBP3Q9H0R5 595 aa18.25■□□□□ 0.51
CNOT3-208ENST00000613073 LRRC10BA6NIK2 292 aa18.25■□□□□ 0.51
CNOT3-208ENST00000613073 GYPCP04921 128 aa18.25■□□□□ 0.51
CNOT3-208ENST00000613073 FXR1P51114 621 aaKnown RBP eCLIP18.25■□□□□ 0.51
CNOT3-208ENST00000613073 UBXN1Q04323 297 aa18.25■□□□□ 0.51
CNOT3-208ENST00000613073 KIAA1755Q5JYT7 1200 aa18.25■□□□□ 0.51
CNOT3-208ENST00000613073 KCNV1Q6PIU1 500 aa18.25■□□□□ 0.51
CNOT3-208ENST00000613073 FAM169AQ9Y6X4 670 aa18.25■□□□□ 0.51
CNOT3-208ENST00000613073 IDEP14735 1019 aa18.25■□□□□ 0.51
CNOT3-208ENST00000613073 HOXA13P31271 388 aaPredicted RBP18.25■□□□□ 0.51
CNOT3-208ENST00000613073 SPAG1Q07617 926 aa18.25■□□□□ 0.51
CNOT3-208ENST00000613073 SWT1Q5T5J6 900 aaKnown RBP18.24■□□□□ 0.51
CNOT3-208ENST00000613073 ANKRD40Q6AI12 368 aa18.24■□□□□ 0.51
CNOT3-208ENST00000613073 TTI2Q6NXR4 508 aa18.24■□□□□ 0.51
CNOT3-208ENST00000613073 CSGALNACT2Q8N6G5 542 aa18.24■□□□□ 0.51
CNOT3-208ENST00000613073 HERC5Q9UII4 1024 aaKnown RBP18.24■□□□□ 0.51
CNOT3-208ENST00000613073 SAMM50Q9Y512 469 aa18.24■□□□□ 0.51
CNOT3-208ENST00000613073 SMCHD1A6NHR9 2005 aa18.24■□□□□ 0.51
CNOT3-208ENST00000613073 ZBTB7AO95365 584 aa18.24■□□□□ 0.51
CNOT3-208ENST00000613073 KIAA0895Q8NCT3 520 aa18.24■□□□□ 0.51
CNOT3-208ENST00000613073 FAM151AQ8WW52 585 aa18.24■□□□□ 0.51
CNOT3-208ENST00000613073 SHTN1A0MZ66 631 aa18.23■□□□□ 0.51
CNOT3-208ENST00000613073 RNF225M0QZC1 329 aaPredicted RBP18.23■□□□□ 0.51
CNOT3-208ENST00000613073 PRPF6O94906 941 aaKnown RBP18.23■□□□□ 0.51
CNOT3-208ENST00000613073 SSBP05455 408 aaKnown RBP eCLIP18.23■□□□□ 0.51
CNOT3-208ENST00000613073 RAD54LQ92698 747 aa18.23■□□□□ 0.51
CNOT3-208ENST00000613073 CEP89Q96ST8 783 aa18.23■□□□□ 0.51
CNOT3-208ENST00000613073 NAPGQ99747 312 aaPredicted RBP18.23■□□□□ 0.51
CNOT3-208ENST00000613073 DUSP9Q99956 384 aaKnown RBP18.23■□□□□ 0.51
CNOT3-208ENST00000613073 PPP1R1BQ9UD71 204 aaPredicted RBP18.23■□□□□ 0.51
CNOT3-208ENST00000613073 PRR12Q9ULL5 1215 aa18.23■□□□□ 0.51
CNOT3-208ENST00000613073 ENC1O14682 589 aa18.23■□□□□ 0.51
CNOT3-208ENST00000613073 MFAP3LO75121 409 aa18.23■□□□□ 0.51
CNOT3-208ENST00000613073 GCFC2P16383 781 aaKnown RBP18.23■□□□□ 0.51
CNOT3-208ENST00000613073 GGCXP38435 758 aa18.23■□□□□ 0.51
CNOT3-208ENST00000613073 STAT3P40763 770 aa18.23■□□□□ 0.51
CNOT3-208ENST00000613073 PRR16Q569H4 304 aa18.23■□□□□ 0.51
CNOT3-208ENST00000613073 CCDC84Q86UT8 332 aaPredicted RBP18.23■□□□□ 0.51
CNOT3-208ENST00000613073 NIM1KQ8IY84 436 aa18.23■□□□□ 0.51
CNOT3-208ENST00000613073 P2RX5Q93086 422 aa18.23■□□□□ 0.51
CNOT3-208ENST00000613073 STK17AQ9UEE5 414 aa18.23■□□□□ 0.51
CNOT3-208ENST00000613073 SUFUQ9UMX1 484 aa18.23■□□□□ 0.51
CNOT3-208ENST00000613073 CNTNAP1P78357 1384 aa18.23■□□□□ 0.51
CNOT3-208ENST00000613073 EBAG9O00559 213 aa18.22■□□□□ 0.51
CNOT3-208ENST00000613073 GSCP56915 257 aaPredicted RBP18.22■□□□□ 0.51
CNOT3-208ENST00000613073 FAM83BQ5T0W9 1011 aa18.22■□□□□ 0.51
CNOT3-208ENST00000613073 DDX12PQ92771 950 aa18.22■□□□□ 0.51
CNOT3-208ENST00000613073 DHTKD1Q96HY7 919 aaPredicted RBP18.22■□□□□ 0.51
CNOT3-208ENST00000613073 PANX2Q96RD6 677 aa18.22■□□□□ 0.51
CNOT3-208ENST00000613073 ZNRF3Q9ULT6 936 aa18.22■□□□□ 0.51
CNOT3-208ENST00000613073 ARHGAP4P98171 946 aa18.22■□□□□ 0.51
CNOT3-208ENST00000613073 NBPF9Q3BBW0 867 aa18.22■□□□□ 0.51
CNOT3-208ENST00000613073 SPDYE2Q495Y8 402 aa18.22■□□□□ 0.51
CNOT3-208ENST00000613073 CNNM4Q6P4Q7 775 aa18.22■□□□□ 0.51
CNOT3-208ENST00000613073 GLT8D2Q9H1C3 349 aa18.22■□□□□ 0.51
CNOT3-208ENST00000613073 ARHGEF10LQ9HCE6 1279 aa18.22■□□□□ 0.51
CNOT3-208ENST00000613073 MAGEC2Q9UBF1 373 aaPredicted RBP18.22■□□□□ 0.51
CNOT3-208ENST00000613073 HDAC6Q9UBN7 1215 aa18.22■□□□□ 0.51
CNOT3-208ENST00000613073 CCNE1P24864 410 aa18.21■□□□□ 0.51
CNOT3-208ENST00000613073 CAPZA3Q96KX2 299 aa18.21■□□□□ 0.51
CNOT3-208ENST00000613073 JPH2Q9BR39 696 aaPredicted RBP18.21■□□□□ 0.51
CNOT3-208ENST00000613073 HPCAL4Q9UM19 191 aa18.21■□□□□ 0.51
CNOT3-208ENST00000613073 SPDYE3A6NKU9 549 aa18.21■□□□□ 0.51
CNOT3-208ENST00000613073 STAT2P52630 851 aa18.21■□□□□ 0.51
CNOT3-208ENST00000613073 CXCL9Q07325 125 aa18.21■□□□□ 0.51
CNOT3-208ENST00000613073 GLIS3Q8NEA6 775 aa18.21■□□□□ 0.51
CNOT3-208ENST00000613073 BCAS4Q8TDM0 211 aa18.21■□□□□ 0.51
CNOT3-208ENST00000613073 THAP9Q9H5L6 903 aa18.21■□□□□ 0.51
CNOT3-208ENST00000613073 TRIM10Q9UDY6 481 aa18.21■□□□□ 0.51
CNOT3-208ENST00000613073 ZBTB21Q9ULJ3 1066 aa18.21■□□□□ 0.51
CNOT3-208ENST00000613073 KIAA1024Q9UPX6 916 aa18.21■□□□□ 0.51
CNOT3-208ENST00000613073 ARFGEF1Q9Y6D6 1849 aa18.21■□□□□ 0.51
CNOT3-208ENST00000613073 E9PMD0 336 aa18.2■□□□□ 0.5
CNOT3-208ENST00000613073 CLGNO14967 610 aa18.2■□□□□ 0.5
CNOT3-208ENST00000613073 NKRFO15226 690 aaKnown RBP eCLIP18.2■□□□□ 0.5
CNOT3-208ENST00000613073 USP11P51784 963 aa18.2■□□□□ 0.5
CNOT3-208ENST00000613073 LRRC41Q15345 812 aa18.2■□□□□ 0.5
CNOT3-208ENST00000613073 GRIPAP1Q4V328 841 aa18.2■□□□□ 0.5
CNOT3-208ENST00000613073 TMEM119Q4V9L6 283 aa18.2■□□□□ 0.5
CNOT3-208ENST00000613073 CCDC174Q6PII3 467 aa18.2■□□□□ 0.5
CNOT3-208ENST00000613073 SRCAPQ6ZRS2 3230 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms