RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 PDXDC1Q6P996 788 aa15.5■□□□□ 0.07
COL6A1-207ENST00000612273 FNBP4Q8N3X1 1017 aaPredicted RBP15.5■□□□□ 0.07
COL6A1-207ENST00000612273 COL4A3BPQ9Y5P4 624 aa15.5■□□□□ 0.07
COL6A1-207ENST00000612273 PPP1R11O60927 126 aaPredicted RBP15.49■□□□□ 0.07
COL6A1-207ENST00000612273 PPFIA4O75335 1185 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 RPS6KA4O75676 772 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 TCP1P17987 556 aaKnown RBP15.49■□□□□ 0.07
COL6A1-207ENST00000612273 ADAM9Q13443 819 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 DOK7Q18PE1 504 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 C16orf86Q6ZW13 317 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 PACS2Q86VP3 889 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 GUF1Q8N442 669 aaKnown RBP15.49■□□□□ 0.07
COL6A1-207ENST00000612273 OR2W6PQ8NHA6 318 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 AENQ8WTP8 325 aaKnown RBP15.49■□□□□ 0.07
COL6A1-207ENST00000612273 ZIM3Q96PE6 472 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 MTMR9Q96QG7 549 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 SPAG5Q96R06 1193 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 TRIM31Q9BZY9 425 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 TARSL2A2RTX5 802 aaKnown RBP15.49■□□□□ 0.07
COL6A1-207ENST00000612273 GUCY1A3Q02108 690 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 GRAPQ13588 217 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 NAA35Q5VZE5 725 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 GRAPLQ8TC17 118 aaPredicted RBP15.49■□□□□ 0.07
COL6A1-207ENST00000612273 CLIC2O15247 247 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 SLC9A1P19634 815 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 AARSP49588 968 aaKnown RBP eCLIP15.49■□□□□ 0.07
COL6A1-207ENST00000612273 FKBP3Q00688 224 aaKnown RBP15.49■□□□□ 0.07
COL6A1-207ENST00000612273 PURBQ96QR8 312 aaKnown RBP15.49■□□□□ 0.07
COL6A1-207ENST00000612273 CDCA7Q9BWT1 371 aaPredicted RBP15.49■□□□□ 0.07
COL6A1-207ENST00000612273 PSTPIP2Q9H939 334 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 VIPAS39Q9H9C1 493 aa15.49■□□□□ 0.07
COL6A1-207ENST00000612273 ZNF219Q9P2Y4 722 aaPredicted RBP15.49■□□□□ 0.07
COL6A1-207ENST00000612273 CASP5P51878 434 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 TTMPQ5BVD1 217 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 CFAP58Q5T655 872 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 GJB7Q6PEY0 223 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 ANKS1AQ92625 1134 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 LZTS2Q9BRK4 669 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 JMJD4Q9H9V9 463 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 MTMR4Q9NYA4 1195 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 PLCH1Q4KWH8 1693 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 CEP104O60308 925 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 CFAP221Q4G0U5 840 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 HGSNATQ68CP4 663 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 HAS1Q92839 578 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 DDX4Q9NQI0 724 aaKnown RBP15.48■□□□□ 0.07
COL6A1-207ENST00000612273 GGA1Q9UJY5 639 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 DOT1LQ8TEK3 1739 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 NDUFAB1O14561 156 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 FGFR1OPO95684 399 aaKnown RBP15.48■□□□□ 0.07
COL6A1-207ENST00000612273 PSMC6P62333 389 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 NNTQ13423 1086 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 TTC31Q49AM3 519 aaPredicted RBP15.48■□□□□ 0.07
COL6A1-207ENST00000612273 PRR16Q569H4 304 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 TRAPPC3LQ5T215 181 aa15.48■□□□□ 0.07
COL6A1-207ENST00000612273 DHX37Q8IY37 1157 aaKnown RBP15.48■□□□□ 0.07
COL6A1-207ENST00000612273 EBAG9O00559 213 aa15.47■□□□□ 0.07
COL6A1-207ENST00000612273 NR2F2P24468 414 aa15.47■□□□□ 0.07
COL6A1-207ENST00000612273 RHBDL3P58872 404 aa15.47■□□□□ 0.07
COL6A1-207ENST00000612273 PDE4CQ08493 712 aa15.47■□□□□ 0.07
COL6A1-207ENST00000612273 PCDHB13Q9Y5F0 798 aa15.47■□□□□ 0.07
COL6A1-207ENST00000612273 SPATA31A5Q5VU36 1347 aa15.47■□□□□ 0.07
COL6A1-207ENST00000612273 SPATA31A7Q8IWB4 1347 aa15.47■□□□□ 0.07
COL6A1-207ENST00000612273 A0A1W2PQJ5 194 aa15.47■□□□□ 0.07
COL6A1-207ENST00000612273 NOL4O94818 638 aa15.47■□□□□ 0.07
COL6A1-207ENST00000612273 PLA2G4BP0C869 781 aa15.47■□□□□ 0.07
COL6A1-207ENST00000612273 SEC24CP53992 1094 aa15.47■□□□□ 0.07
COL6A1-207ENST00000612273 PRPF4BQ13523 1007 aaKnown RBP15.47■□□□□ 0.07
COL6A1-207ENST00000612273 MAGEF1Q9HAY2 307 aa15.47■□□□□ 0.07
COL6A1-207ENST00000612273 SEPT11Q9NVA2 429 aaKnown RBP15.47■□□□□ 0.07
COL6A1-207ENST00000612273 POLLQ9UGP5 575 aa15.47■□□□□ 0.07
COL6A1-207ENST00000612273 PCDHAC2Q9Y5I4 1007 aa15.47■□□□□ 0.07
COL6A1-207ENST00000612273 MMGT1Q8N4V1 131 aa15.46■□□□□ 0.07
COL6A1-207ENST00000612273 TSPYL1Q9H0U9 437 aa15.46■□□□□ 0.07
COL6A1-207ENST00000612273 EMILIN3Q9NT22 766 aa15.46■□□□□ 0.07
COL6A1-207ENST00000612273 STK17AQ9UEE5 414 aa15.46■□□□□ 0.07
COL6A1-207ENST00000612273 PVALEFA0A1B0GWK0 134 aa15.46■□□□□ 0.07
COL6A1-207ENST00000612273 G3V3G9 751 aa15.46■□□□□ 0.07
COL6A1-207ENST00000612273 RBM5P52756 815 aaKnown RBP eCLIP15.46■□□□□ 0.07
COL6A1-207ENST00000612273 EPHB4P54760 987 aa15.46■□□□□ 0.07
COL6A1-207ENST00000612273 PPP4CP60510 307 aa15.46■□□□□ 0.07
COL6A1-207ENST00000612273 KCNA1Q09470 495 aa15.46■□□□□ 0.07
COL6A1-207ENST00000612273 LLGL1Q15334 1064 aa15.46■□□□□ 0.07
COL6A1-207ENST00000612273 DCAF8Q5TAQ9 597 aa15.46■□□□□ 0.07
COL6A1-207ENST00000612273 KSR1Q8IVT5 923 aa15.46■□□□□ 0.07
COL6A1-207ENST00000612273 DNAJC19Q96DA6 116 aa15.46■□□□□ 0.07
COL6A1-207ENST00000612273 LEMD3Q9Y2U8 911 aa15.46■□□□□ 0.07
COL6A1-207ENST00000612273 DAGLAQ9Y4D2 1042 aa15.46■□□□□ 0.07
COL6A1-207ENST00000612273 LRRC63Q05C16 580 aa15.46■□□□□ 0.06
COL6A1-207ENST00000612273 KCNH2Q12809 1159 aa15.46■□□□□ 0.06
COL6A1-207ENST00000612273 PLS1Q14651 629 aa15.46■□□□□ 0.06
COL6A1-207ENST00000612273 TAF4BQ92750 862 aa15.46■□□□□ 0.06
COL6A1-207ENST00000612273 SHTN1A0MZ66 631 aa15.45■□□□□ 0.06
COL6A1-207ENST00000612273 RSPH10B2B2RC85 870 aa15.45■□□□□ 0.06
COL6A1-207ENST00000612273 CHMP2AO43633 222 aa15.45■□□□□ 0.06
COL6A1-207ENST00000612273 RSPH10BP0C881 870 aa15.45■□□□□ 0.06
COL6A1-207ENST00000612273 PTK2Q05397 1052 aa15.45■□□□□ 0.06
COL6A1-207ENST00000612273 FIGNQ5HY92 759 aa15.45■□□□□ 0.06
COL6A1-207ENST00000612273 CEP85LQ5SZL2 805 aa15.45■□□□□ 0.06
COL6A1-207ENST00000612273 FBXW10Q5XX13 1052 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms