RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 ERCC4Q92889 916 aaPredicted RBP13.02□□□□□ -0.33
CTCFL-221ENST00000608903 GPRASP2Q96D09 838 aa13.02□□□□□ -0.33
CTCFL-221ENST00000608903 CLSTN2Q9H4D0 955 aa13.02□□□□□ -0.33
CTCFL-221ENST00000608903 FAM13BQ9NYF5 915 aa13.02□□□□□ -0.33
CTCFL-221ENST00000608903 FLRT1Q9NZU1 646 aa13.02□□□□□ -0.33
CTCFL-221ENST00000608903 IVNS1ABPQ9Y6Y0 642 aa13.02□□□□□ -0.33
CTCFL-221ENST00000608903 A0A087WWV3 80 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 ARIH2O95376 493 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 SNAI1O95863 264 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-221ENST00000608903 PDE4DQ08499 809 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 ARMCX2Q7L311 632 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 CABP7Q86V35 215 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 MAML3Q96JK9 1138 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 TRIM47Q96LD4 638 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 AK8Q96MA6 479 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 CFHR5Q9BXR6 569 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 KATNBL1Q9H079 304 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 PDGFCQ9NRA1 345 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-221ENST00000608903 SORBS3O60504 671 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 MED24O75448 989 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 CCNE2O96020 404 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 IGHA2P01877 340 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 SPATA31C1P0DKV0 1188 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 ICAM3P32942 547 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 MAP2K5Q13163 448 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 PPP2R5CQ13362 524 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 CCL14Q16627 93 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 TMEM266Q2M3C6 531 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 NCAPH2Q6IBW4 605 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 KCNK18Q7Z418 384 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 DPP9Q86TI2 863 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 FBXO16Q8IX29 292 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-221ENST00000608903 GRAMD1CQ8IYS0 662 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 DHX58Q96C10 678 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 MTRQ99707 1265 aa13.01□□□□□ -0.33
CTCFL-221ENST00000608903 CHMP2AO43633 222 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 GAS7O60861 476 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 STAM2O75886 525 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 UBA7P41226 1012 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 LACTBP83111 547 aaPredicted RBP13□□□□□ -0.33
CTCFL-221ENST00000608903 MDM2Q00987 491 aaPredicted RBP13□□□□□ -0.33
CTCFL-221ENST00000608903 CCDC183Q5T5S1 534 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 PDXDC2PQ6P474 469 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 MAMDC4Q6UXC1 1216 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 KRBA2Q6ZNG9 492 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 NLRX1Q86UT6 975 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 RIT2Q99578 217 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 DDX19AQ9NUU7 478 aaKnown RBP13□□□□□ -0.33
CTCFL-221ENST00000608903 RGL1Q9NZL6 768 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 GABRQQ9UN88 632 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 PRR29P0C7W0 189 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 PLCG1P19174 1290 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 PSMC4P43686 418 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 ZRSR1Q15695 479 aaKnown RBP13□□□□□ -0.33
CTCFL-221ENST00000608903 TAPT1Q6NXT6 567 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 ZNF467Q7Z7K2 595 aaPredicted RBP13□□□□□ -0.33
CTCFL-221ENST00000608903 SNX29Q8TEQ0 813 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 TEKT3Q9BXF9 490 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 BLOC1S4Q9NUP1 217 aa13□□□□□ -0.33
CTCFL-221ENST00000608903 WRAP73Q9P2S5 460 aaPredicted RBP13□□□□□ -0.33
CTCFL-221ENST00000608903 DIS3Q9Y2L1 958 aaKnown RBP13□□□□□ -0.33
CTCFL-221ENST00000608903 TNPO2O14787 897 aaKnown RBP12.99□□□□□ -0.33
CTCFL-221ENST00000608903 HOXC6P09630 235 aa12.99□□□□□ -0.33
CTCFL-221ENST00000608903 HSPA6P17066 643 aa12.99□□□□□ -0.33
CTCFL-221ENST00000608903 CYP2B6P20813 491 aa12.99□□□□□ -0.33
CTCFL-221ENST00000608903 CASP1P29466 404 aa12.99□□□□□ -0.33
CTCFL-221ENST00000608903 C1QTNF8P60827 252 aa12.99□□□□□ -0.33
CTCFL-221ENST00000608903 LY6KQ17RY6 165 aa12.99□□□□□ -0.33
CTCFL-221ENST00000608903 TMEM119Q4V9L6 283 aa12.99□□□□□ -0.33
CTCFL-221ENST00000608903 CCDC62Q6P9F0 684 aa12.99□□□□□ -0.33
CTCFL-221ENST00000608903 RBM43Q6ZSC3 357 aaKnown RBP12.99□□□□□ -0.33
CTCFL-221ENST00000608903 SH3RF1Q7Z6J0 888 aa12.99□□□□□ -0.33
CTCFL-221ENST00000608903 CATSPER3Q86XQ3 398 aa12.99□□□□□ -0.33
CTCFL-221ENST00000608903 CKAP2LQ8IYA6 745 aa12.99□□□□□ -0.33
CTCFL-221ENST00000608903 STAMQ92783 540 aa12.99□□□□□ -0.33
CTCFL-221ENST00000608903 TIGD1Q96MW7 591 aa12.99□□□□□ -0.33
CTCFL-221ENST00000608903 HSD17B14Q9BPX1 270 aa12.99□□□□□ -0.33
CTCFL-221ENST00000608903 NUP62CLQ9H1M0 184 aa12.99□□□□□ -0.33
CTCFL-221ENST00000608903 DISC1Q9NRI5 854 aa12.99□□□□□ -0.33
CTCFL-221ENST00000608903 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.99□□□□□ -0.33
CTCFL-221ENST00000608903 POTEB3A0JP26 581 aa12.98□□□□□ -0.33
CTCFL-221ENST00000608903 ASB14A6NK59 587 aa12.98□□□□□ -0.33
CTCFL-221ENST00000608903 MAFGO15525 162 aa12.98□□□□□ -0.33
CTCFL-221ENST00000608903 KINO60870 393 aaKnown RBP12.98□□□□□ -0.33
CTCFL-221ENST00000608903 SLITRK3O94933 977 aa12.98□□□□□ -0.33
CTCFL-221ENST00000608903 PSMC6P62333 389 aa12.98□□□□□ -0.33
CTCFL-221ENST00000608903 PRAMEF19Q5SWL8 479 aa12.98□□□□□ -0.33
CTCFL-221ENST00000608903 HYIQ5T013 277 aa12.98□□□□□ -0.33
CTCFL-221ENST00000608903 POTEBQ6S5H4 581 aa12.98□□□□□ -0.33
CTCFL-221ENST00000608903 COPS5Q92905 334 aa12.98□□□□□ -0.33
CTCFL-221ENST00000608903 SYAP1Q96A49 352 aaPredicted RBP12.98□□□□□ -0.33
CTCFL-221ENST00000608903 EIF2AK1Q9BQI3 630 aaKnown RBP12.98□□□□□ -0.33
CTCFL-221ENST00000608903 DDX41Q9UJV9 622 aaKnown RBP12.98□□□□□ -0.33
CTCFL-221ENST00000608903 LOC102724159A0A0B4J2E5 919 aa12.98□□□□□ -0.33
CTCFL-221ENST00000608903 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
CTCFL-221ENST00000608903 SLFN14P0C7P3 912 aa12.98□□□□□ -0.33
CTCFL-221ENST00000608903 UBA1P22314 1058 aaKnown RBP12.98□□□□□ -0.33
CTCFL-221ENST00000608903 CCT6AP40227 531 aaKnown RBP12.98□□□□□ -0.33
CTCFL-221ENST00000608903 SP3Q02447 781 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms