RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 NDST4Q9H3R1 872 aa22.04■■□□□ 1.12
MMP28-201ENST00000605424 ZNHIT6Q9NWK9 470 aaKnown RBP22.04■■□□□ 1.12
MMP28-201ENST00000605424 PCDHA2Q9Y5H9 948 aa22.04■■□□□ 1.12
MMP28-201ENST00000605424 GNA14O95837 355 aa22.04■■□□□ 1.12
MMP28-201ENST00000605424 RPS12P25398 132 aaKnown RBP22.04■■□□□ 1.12
MMP28-201ENST00000605424 CDK17Q00537 523 aa22.04■■□□□ 1.12
MMP28-201ENST00000605424 TNFAIP1Q13829 316 aa22.04■■□□□ 1.12
MMP28-201ENST00000605424 ARHGAP29Q52LW3 1261 aa22.04■■□□□ 1.12
MMP28-201ENST00000605424 NCAPH2Q6IBW4 605 aa22.04■■□□□ 1.12
MMP28-201ENST00000605424 VAV3Q9UKW4 847 aa22.04■■□□□ 1.12
MMP28-201ENST00000605424 IGLV3-22A0A075B6J6 115 aa22.03■■□□□ 1.12
MMP28-201ENST00000605424 NDUFA10O95299 355 aa22.03■■□□□ 1.12
MMP28-201ENST00000605424 SPATA31C1P0DKV0 1188 aa22.03■■□□□ 1.12
MMP28-201ENST00000605424 PPP4R3CPQ6ZMV5 832 aa22.03■■□□□ 1.12
MMP28-201ENST00000605424 MIGA2Q7L4E1 593 aa22.03■■□□□ 1.12
MMP28-201ENST00000605424 LZTFL1Q9NQ48 299 aa22.03■■□□□ 1.12
MMP28-201ENST00000605424 RABGAP1Q9Y3P9 1069 aa22.03■■□□□ 1.12
MMP28-201ENST00000605424 CFBP00751 764 aa22.02■■□□□ 1.12
MMP28-201ENST00000605424 ZNF280AP59817 542 aaPredicted RBP22.02■■□□□ 1.12
MMP28-201ENST00000605424 NAA30Q147X3 362 aaPredicted RBP22.02■■□□□ 1.12
MMP28-201ENST00000605424 HERC4Q5GLZ8 1057 aaPredicted RBP22.02■■□□□ 1.12
MMP28-201ENST00000605424 ZNF662Q6ZS27 426 aa22.02■■□□□ 1.12
MMP28-201ENST00000605424 ARHGAP27Q6ZUM4 889 aa22.02■■□□□ 1.12
MMP28-201ENST00000605424 CCDC170Q8IYT3 715 aa22.02■■□□□ 1.12
MMP28-201ENST00000605424 MNS1Q8NEH6 495 aa22.02■■□□□ 1.12
MMP28-201ENST00000605424 CCDC94Q9BW85 323 aaPredicted RBP22.02■■□□□ 1.12
MMP28-201ENST00000605424 POTEFA5A3E0 1075 aa22.02■■□□□ 1.11
MMP28-201ENST00000605424 RASSF10A6NK89 507 aa22.02■■□□□ 1.11
MMP28-201ENST00000605424 KRT18P05783 430 aaKnown RBP22.02■■□□□ 1.11
MMP28-201ENST00000605424 POTEIP0CG38 1075 aa22.02■■□□□ 1.11
MMP28-201ENST00000605424 MUTP22033 750 aa22.02■■□□□ 1.11
MMP28-201ENST00000605424 NBPF9Q3BBW0 867 aa22.02■■□□□ 1.11
MMP28-201ENST00000605424 ARSHQ5FYA8 562 aa22.02■■□□□ 1.11
MMP28-201ENST00000605424 POTEGQ6S5H5 508 aa22.02■■□□□ 1.11
MMP28-201ENST00000605424 POTEEQ6S8J3 1075 aa22.02■■□□□ 1.11
MMP28-201ENST00000605424 EEF2KMTQ96G04 330 aa22.02■■□□□ 1.11
MMP28-201ENST00000605424 PCMTD1Q96MG8 357 aaPredicted RBP22.02■■□□□ 1.11
MMP28-201ENST00000605424 CHP1Q99653 195 aa22.02■■□□□ 1.11
MMP28-201ENST00000605424 MRFAP1Q9Y605 127 aa22.02■■□□□ 1.11
MMP28-201ENST00000605424 FER1L6Q2WGJ9 1857 aa22.02■■□□□ 1.11
MMP28-201ENST00000605424 EFCAB8A8MWE9 144 aa22.01■■□□□ 1.11
MMP28-201ENST00000605424 KRT83P78385 493 aa22.01■■□□□ 1.11
MMP28-201ENST00000605424 LRRC41Q15345 812 aa22.01■■□□□ 1.11
MMP28-201ENST00000605424 CCDC174Q6PII3 467 aa22.01■■□□□ 1.11
MMP28-201ENST00000605424 WDR59Q6PJI9 974 aa22.01■■□□□ 1.11
MMP28-201ENST00000605424 EDEM3Q9BZQ6 932 aa22.01■■□□□ 1.11
MMP28-201ENST00000605424 COL4A3BPQ9Y5P4 624 aa22.01■■□□□ 1.11
MMP28-201ENST00000605424 CYLC1P35663 651 aaPredicted RBP22■■□□□ 1.11
MMP28-201ENST00000605424 MARSP56192 900 aaKnown RBP22■■□□□ 1.11
MMP28-201ENST00000605424 CDAN1Q8IWY9 1227 aa22■■□□□ 1.11
MMP28-201ENST00000605424 ACRBPQ8NEB7 543 aa22■■□□□ 1.11
MMP28-201ENST00000605424 LPAR1Q92633 364 aa22■■□□□ 1.11
MMP28-201ENST00000605424 TUFT1Q9NNX1 390 aa22■■□□□ 1.11
MMP28-201ENST00000605424 EMILIN3Q9NT22 766 aa22■■□□□ 1.11
MMP28-201ENST00000605424 SIK3Q9Y2K2 1263 aa22■■□□□ 1.11
MMP28-201ENST00000605424 HNRNPH3P31942 346 aaKnown RBP22■■□□□ 1.11
MMP28-201ENST00000605424 GIT2Q14161 759 aa22■■□□□ 1.11
MMP28-201ENST00000605424 ELF2Q15723 593 aa22■■□□□ 1.11
MMP28-201ENST00000605424 EDRF1Q3B7T1 1238 aa22■■□□□ 1.11
MMP28-201ENST00000605424 ZC3H3Q8IXZ2 948 aaKnown RBP22■■□□□ 1.11
MMP28-201ENST00000605424 SLC5A5Q92911 643 aa22■■□□□ 1.11
MMP28-201ENST00000605424 PHF20L1A8MW92 1017 aa21.99■■□□□ 1.11
MMP28-201ENST00000605424 TRAF5O00463 557 aa21.99■■□□□ 1.11
MMP28-201ENST00000605424 EYA4O95677 639 aa21.99■■□□□ 1.11
MMP28-201ENST00000605424 SETQ01105 290 aaPredicted RBP21.99■■□□□ 1.11
MMP28-201ENST00000605424 PPP2R5CQ13362 524 aa21.99■■□□□ 1.11
MMP28-201ENST00000605424 RASA3Q14644 834 aa21.99■■□□□ 1.11
MMP28-201ENST00000605424 LDHDQ86WU2 507 aa21.99■■□□□ 1.11
MMP28-201ENST00000605424 GLIS3Q8NEA6 775 aa21.99■■□□□ 1.11
MMP28-201ENST00000605424 UBXN4Q92575 508 aa21.99■■□□□ 1.11
MMP28-201ENST00000605424 EIF2AK1Q9BQI3 630 aaKnown RBP21.99■■□□□ 1.11
MMP28-201ENST00000605424 SLF1Q9BQI6 1058 aa21.99■■□□□ 1.11
MMP28-201ENST00000605424 HAUS4Q9H6D7 363 aa21.99■■□□□ 1.11
MMP28-201ENST00000605424 AGPAT5Q9NUQ2 364 aa21.99■■□□□ 1.11
MMP28-201ENST00000605424 BCS1LQ9Y276 419 aa21.99■■□□□ 1.11
MMP28-201ENST00000605424 PSMD10O75832 226 aa21.98■■□□□ 1.11
MMP28-201ENST00000605424 TAL1P17542 331 aaPredicted RBP21.98■■□□□ 1.11
MMP28-201ENST00000605424 OTOP1Q7RTM1 612 aa21.98■■□□□ 1.11
MMP28-201ENST00000605424 CYP2W1Q8TAV3 490 aa21.98■■□□□ 1.11
MMP28-201ENST00000605424 SCFD1Q8WVM8 642 aa21.98■■□□□ 1.11
MMP28-201ENST00000605424 UIMC1Q96RL1 719 aa21.98■■□□□ 1.11
MMP28-201ENST00000605424 FEZ1Q99689 392 aa21.98■■□□□ 1.11
MMP28-201ENST00000605424 KCTD10Q9H3F6 313 aa21.98■■□□□ 1.11
MMP28-201ENST00000605424 WDR46O15213 610 aaKnown RBP21.98■■□□□ 1.11
MMP28-201ENST00000605424 TADA3O75528 432 aa21.98■■□□□ 1.11
MMP28-201ENST00000605424 ICAM1P05362 532 aa21.98■■□□□ 1.11
MMP28-201ENST00000605424 ARHGAP25P42331 645 aa21.98■■□□□ 1.11
MMP28-201ENST00000605424 CEP55Q53EZ4 464 aa21.98■■□□□ 1.11
MMP28-201ENST00000605424 ZNF569Q5MCW4 686 aa21.98■■□□□ 1.11
MMP28-201ENST00000605424 HSD17B14Q9BPX1 270 aa21.98■■□□□ 1.11
MMP28-201ENST00000605424 CARD6Q9BX69 1037 aa21.98■■□□□ 1.11
MMP28-201ENST00000605424 WDR11Q9BZH6 1224 aa21.98■■□□□ 1.11
MMP28-201ENST00000605424 PLAGL2Q9UPG8 496 aa21.98■■□□□ 1.11
MMP28-201ENST00000605424 EIF3CLB5ME19 914 aaKnown RBP21.97■■□□□ 1.11
MMP28-201ENST00000605424 IPO7O95373 1038 aaKnown RBP21.97■■□□□ 1.11
MMP28-201ENST00000605424 PSMC6P62333 389 aa21.97■■□□□ 1.11
MMP28-201ENST00000605424 PABPC4Q13310 644 aaKnown RBP eCLIP21.97■■□□□ 1.11
MMP28-201ENST00000605424 ZYXQ15942 572 aaKnown RBP21.97■■□□□ 1.11
MMP28-201ENST00000605424 ERCC6LQ2NKX8 1250 aa21.97■■□□□ 1.11
MMP28-201ENST00000605424 LRCH2Q5VUJ6 765 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms