RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-206ENST00000602307 LMNTD2Q8IXW0 634 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 CCDC170Q8IYT3 715 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 FAM71BQ8TC56 605 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 OXER1Q8TDS5 423 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 FAM149B1Q96BN6 582 aa13.14□□□□□ -0.31
PTPN23-206ENST00000602307 NXF1Q9UBU9 619 aaKnown RBP13.14□□□□□ -0.31
PTPN23-206ENST00000602307 FAM196BA6NMK8 535 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 MMP10P09238 476 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 LIG3P49916 1009 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 CLCN6P51797 869 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 YWHAGP61981 247 aaKnown RBP eCLIP13.13□□□□□ -0.31
PTPN23-206ENST00000602307 CELF1Q92879 486 aaKnown RBP13.13□□□□□ -0.31
PTPN23-206ENST00000602307 PARVGQ9HBI0 331 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 ADAMTS1Q9UHI8 967 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 MINPP1Q9UNW1 487 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 PNMA6FA0A0J9YX94 578 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 CLNS1AP54105 237 aaKnown RBP13.13□□□□□ -0.31
PTPN23-206ENST00000602307 PPP2R5AQ15172 486 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 DAAM1Q9Y4D1 1078 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 LRRC7Q96NW7 1537 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 GOLGA8IPA6NC78 632 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 GOLGA8JA6NMD2 632 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 GH2P01242 217 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 TYW1Q9NV66 732 aaKnown RBP13.13□□□□□ -0.31
PTPN23-206ENST00000602307 ATP8A1Q9Y2Q0 1164 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 USP17L5A8MUK1 530 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 hCG_1984214I3L0E3 225 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 MYL1P05976 194 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 PTPREP23469 700 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 MRPS25P82663 173 aaKnown RBP13.13□□□□□ -0.31
PTPN23-206ENST00000602307 ZNF713Q8N859 430 aaPredicted RBP13.13□□□□□ -0.31
PTPN23-206ENST00000602307 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.13□□□□□ -0.31
PTPN23-206ENST00000602307 STAG1Q8WVM7 1258 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 PPP1R16BQ96T49 567 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 BRIP1Q9BX63 1249 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 VCX3BQ9H321 246 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 NUB1Q9Y5A7 615 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 KIDINS220Q9ULH0 1771 aa13.13□□□□□ -0.31
PTPN23-206ENST00000602307 CCT5P48643 541 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 CCDC144BQ3MJ40 725 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 TCP11X2Q5H9J9 407 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 CYP4F22Q6NT55 531 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 HAUS1Q96CS2 278 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 DIP2CQ9Y2E4 1556 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 MED14O60244 1454 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 UBN2Q6ZU65 1347 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 SGK1O00141 431 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
PTPN23-206ENST00000602307 CLEC4GQ6UXB4 293 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 SEPT12Q8IYM1 358 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 PIGOQ8TEQ8 1089 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 TMEM47Q9BQJ4 181 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 SPATA31A3Q5VYP0 1347 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 POTEMA6NI47 508 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 MXI1P50539 228 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 TSNAXIP1Q2TAA8 658 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 ARL6IP4Q66PJ3 421 aaKnown RBP13.12□□□□□ -0.31
PTPN23-206ENST00000602307 CLEC17AQ6ZS10 378 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 ZBTB33Q86T24 672 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 RPUSD2Q8IZ73 545 aaKnown RBP13.12□□□□□ -0.31
PTPN23-206ENST00000602307 NEXMIFQ5QGS0 1516 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 PALM3A6NDB9 673 aaPredicted RBP13.12□□□□□ -0.31
PTPN23-206ENST00000602307 ARHGAP42A6NI28 874 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 RESP18Q5W5W9 173 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 NXNQ6DKJ4 435 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 PARD6BQ9BYG5 372 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 THAP9Q9H5L6 903 aa13.12□□□□□ -0.31
PTPN23-206ENST00000602307 TRIM49BA6NDI0 452 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 PGRMC1O00264 195 aaKnown RBP13.11□□□□□ -0.31
PTPN23-206ENST00000602307 CD58P19256 250 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 KIF11P52732 1056 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 DYNLT1P63172 113 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 TFDP1Q14186 410 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 RFX6Q8HWS3 928 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 C7orf31Q8N865 590 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 GSDMBQ8TAX9 411 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 MIS12Q9H081 205 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 GOLPH3LQ9H4A5 285 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 PNPLA6Q8IY17 1366 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 PHLPP2Q6ZVD8 1323 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 RPS6KA4O75676 772 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 ENAHQ8N8S7 591 aaPredicted RBP13.11□□□□□ -0.31
PTPN23-206ENST00000602307 COA1Q9GZY4 146 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 CPSF2Q9P2I0 782 aaKnown RBP13.11□□□□□ -0.31
PTPN23-206ENST00000602307 TLR3O15455 904 aaKnown RBP13.11□□□□□ -0.31
PTPN23-206ENST00000602307 CDC27P30260 824 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 USP14P54578 494 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 SLC7A5Q01650 507 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 RPS6KA2Q15349 733 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 SGO2Q562F6 1265 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 PPP4R1Q8TF05 950 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 TMEM206Q9H813 350 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.11□□□□□ -0.31
PTPN23-206ENST00000602307 FAN1Q9Y2M0 1017 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 A6NJR5 290 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 USP17L15C9J2P7 530 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 USP17L13C9JLJ4 530 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 USP17L11C9JVI0 530 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 USP17L18D6R9N7 530 aa13.11□□□□□ -0.31
PTPN23-206ENST00000602307 USP17L22D6RA61 530 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms