RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	PPAN	Q9NQ55	473 aa	Known RBP	18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	NFS1	Q9Y697	457 aa		18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	STRC	Q7RTU9	1775 aa		18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	GCOM1	H8Y6P7	765 aa	Predicted RBP	18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	CES2	O00748	559 aa		18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	MYZAP	P0CAP1	466 aa		18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	ECHS1	P30084	290 aa		18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	ERVK-9	P63128	1117 aa		18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	PROM2	Q8N271	834 aa		18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	TBC1D5	Q92609	795 aa		18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	ACTR5	Q9H9F9	607 aa	Predicted RBP	18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	TFCP2L1	Q9NZI6	479 aa		18.25	■□□□□ 0.51
CAPN12-211	ENST00000601685	GMNC	A6NCL1	334 aa		18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	USP17L3	A6NCW0	530 aa		18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	USP17L4	A6NCW7	530 aa		18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	ORC2	Q13416	577 aa	Predicted RBP	18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	C12orf60	Q5U649	245 aa		18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	USP17L1	Q7RTZ2	530 aa		18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	LZTS2	Q9BRK4	669 aa		18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	SLC40A1	Q9NP59	571 aa		18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	SLC12A6	Q9UHW9	1150 aa		18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	JAG2	Q9Y219	1238 aa		18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	SMCO2	A6NFE2	343 aa		18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	TXK	P42681	527 aa		18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	PSMD2	Q13200	908 aa		18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	CUL1	Q13616	776 aa		18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	HLTF	Q14527	1009 aa	Known RBP eCLIP	18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	KIAA0753	Q2KHM9	967 aa		18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	LSM14B	Q9BX40	385 aa	Known RBP	18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	C6orf50	Q9HD87	102 aa		18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	MTMR7	Q9Y216	660 aa		18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685	COL4A3BP	Q9Y5P4	624 aa		18.24	■□□□□ 0.51
CAPN12-211	ENST00000601685		A0A087X0T9	212 aa		18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	FAM228B	P0C875	321 aa		18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	GNA11	P29992	359 aa		18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	RDX	P35241	583 aa	Known RBP	18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	POLR2F	P61218	127 aa	Known RBP	18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	LRRC41	Q15345	812 aa		18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	UAP1	Q16222	522 aa	Predicted RBP	18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	CCDC121	Q6ZUS5	278 aa		18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	MARCH10	Q8NA82	808 aa	Predicted RBP	18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	TBCK	Q8TEA7	893 aa		18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	TAF4B	Q92750	862 aa		18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	LRRC45	Q96CN5	670 aa		18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	DYNLL2	Q96FJ2	89 aa		18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	DDX20	Q9UHI6	824 aa	Known RBP	18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	TRAPPC3	O43617	180 aa		18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	PREPL	Q4J6C6	727 aa	Predicted RBP	18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	GLIS3	Q8NEA6	775 aa		18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	SCFD2	Q8WU76	684 aa		18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	MTMR9	Q96QG7	549 aa		18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	SPZ1	Q9BXG8	430 aa		18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	PACSIN1	Q9BY11	444 aa		18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	CENPH	Q9H3R5	247 aa		18.23	■□□□□ 0.51
CAPN12-211	ENST00000601685	BHMG1	C9JSJ3	638 aa	Predicted RBP	18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	KLRF2	D3W0D1	207 aa		18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	GOLGA8H	P0CJ92	632 aa		18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	FKBP3	Q00688	224 aa	Known RBP	18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	ZNF844	Q08AG5	666 aa		18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	BIRC3	Q13489	604 aa		18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	RPS6KA1	Q15418	735 aa		18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	ZCWPW2	Q504Y3	356 aa		18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	CLEC4G	Q6UXB4	293 aa		18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	RAD54L	Q92698	747 aa		18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	CDK5RAP3	Q96JB5	506 aa		18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	BTNL10	A8MVZ5	291 aa		18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	FXR2	P51116	673 aa	Known RBP eCLIP	18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	RUFY4	Q6ZNE9	571 aa		18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	OR2W6P	Q8NHA6	318 aa		18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	CCDC114	Q96M63	670 aa		18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	TMEM47	Q9BQJ4	181 aa		18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	MKNK2	Q9HBH9	465 aa		18.22	■□□□□ 0.51
CAPN12-211	ENST00000601685	TSPY3	P0CV98	308 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	TSPY8	P0CW00	308 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	HIBADH	P31937	336 aa	Known RBP	18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	MMP14	P50281	582 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	MYOCD	Q8IZQ8	938 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	DDX12P	Q92771	950 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	PBK	Q96KB5	322 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	AIPL1	Q9NZN9	384 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	WNK3	Q9BYP7	1800 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	GOLGA6L7	A0A1B0GV03	622 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	KCNK3	O14649	394 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	KLHL30	Q0D2K2	578 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	AGBL2	Q5U5Z8	902 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	SMIM5	Q71RC9	77 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	OSBPL7	Q9BZF2	842 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	LRRC27	Q9C0I9	530 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	CPVL	Q9H3G5	476 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	ADAMTS1	Q9UHI8	967 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	MCM8	Q9UJA3	840 aa		18.21	■□□□□ 0.51
CAPN12-211	ENST00000601685	C5orf60	A6NFR6	353 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	KCNQ2	O43526	872 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	C21orf2	O43822	256 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	KIF4A	O95239	1232 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	CTNNA1	P35221	906 aa	Known RBP	18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	CDR1	P51861	262 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	KCNQ4	P56696	695 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	RAPGEF1	Q13905	1077 aa		18.2	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms