RNA–Protein interactions for RNA: ENST00000600944.5

CPT1C-223, Transcript of carnitine palmitoyltransferase 1C, human

TSL 2

Gene CPT1C, Length 1,027 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPT1C-223	ENST00000600944	PDGFB	P01127	241 aa	Predicted RBP	18.2	■□□□□ 0.5
CPT1C-223	ENST00000600944	CBX2	Q14781	532 aa	Predicted RBP	18.2	■□□□□ 0.5
CPT1C-223	ENST00000600944	ADGRD2	Q7Z7M1	963 aa		18.2	■□□□□ 0.5
CPT1C-223	ENST00000600944	SIRT2	Q8IXJ6	389 aa		18.2	■□□□□ 0.5
CPT1C-223	ENST00000600944	SYTL5	Q8TDW5	730 aa	Predicted RBP	18.2	■□□□□ 0.5
CPT1C-223	ENST00000600944	IWS1	Q96ST2	819 aa		18.2	■□□□□ 0.5
CPT1C-223	ENST00000600944	TMEM47	Q9BQJ4	181 aa		18.2	■□□□□ 0.5
CPT1C-223	ENST00000600944	CLEC1B	Q9P126	229 aa		18.2	■□□□□ 0.5
CPT1C-223	ENST00000600944	TREH	O43280	583 aa		18.19	■□□□□ 0.5
CPT1C-223	ENST00000600944	PDHB	P11177	359 aa		18.19	■□□□□ 0.5
CPT1C-223	ENST00000600944	SP100	P23497	879 aa	Predicted RBP	18.19	■□□□□ 0.5
CPT1C-223	ENST00000600944	ICAM3	P32942	547 aa		18.19	■□□□□ 0.5
CPT1C-223	ENST00000600944	COASY	Q13057	564 aa		18.19	■□□□□ 0.5
CPT1C-223	ENST00000600944	PTPN21	Q16825	1174 aa		18.19	■□□□□ 0.5
CPT1C-223	ENST00000600944	EFHB	Q8N7U6	833 aa		18.19	■□□□□ 0.5
CPT1C-223	ENST00000600944	TBC1D5	Q92609	795 aa		18.19	■□□□□ 0.5
CPT1C-223	ENST00000600944	COL20A1	Q9P218	1284 aa		18.19	■□□□□ 0.5
CPT1C-223	ENST00000600944	RIF1	Q5UIP0	2472 aa	Known RBP	18.18	■□□□□ 0.5
CPT1C-223	ENST00000600944	PPFIA4	O75335	1185 aa		18.18	■□□□□ 0.5
CPT1C-223	ENST00000600944	GGPS1	O95749	300 aa		18.18	■□□□□ 0.5
CPT1C-223	ENST00000600944	SMIM10L2A	P0DMW4	78 aa		18.18	■□□□□ 0.5
CPT1C-223	ENST00000600944	SMIM10L2B	P0DMW5	78 aa		18.18	■□□□□ 0.5
CPT1C-223	ENST00000600944	RGS22	Q8NE09	1264 aa		18.18	■□□□□ 0.5
CPT1C-223	ENST00000600944	NKD2	Q969F2	451 aa	Predicted RBP	18.18	■□□□□ 0.5
CPT1C-223	ENST00000600944	PLVAP	Q9BX97	442 aa		18.18	■□□□□ 0.5
CPT1C-223	ENST00000600944	PLAGL2	Q9UPG8	496 aa		18.18	■□□□□ 0.5
CPT1C-223	ENST00000600944	FAM186A	A6NE01	2351 aa		18.18	■□□□□ 0.5
CPT1C-223	ENST00000600944	MYO15A	Q9UKN7	3530 aa		18.17	■□□□□ 0.5
CPT1C-223	ENST00000600944	CAND2	O75155	1236 aa		18.17	■□□□□ 0.5
CPT1C-223	ENST00000600944	EIF3J	O75822	258 aa	Known RBP	18.17	■□□□□ 0.5
CPT1C-223	ENST00000600944	MYCL	P12524	364 aa	Predicted RBP	18.17	■□□□□ 0.5
CPT1C-223	ENST00000600944	NUBP1	P53384	320 aa		18.17	■□□□□ 0.5
CPT1C-223	ENST00000600944	ZNF543	Q08ER8	600 aa		18.17	■□□□□ 0.5
CPT1C-223	ENST00000600944	HSDL1	Q3SXM5	330 aa		18.17	■□□□□ 0.5
CPT1C-223	ENST00000600944	FRMD5	Q7Z6J6	570 aa		18.17	■□□□□ 0.5
CPT1C-223	ENST00000600944	MCF2L2	Q86YR7	1114 aa		18.17	■□□□□ 0.5
CPT1C-223	ENST00000600944	ADSSL1	Q8N142	457 aa		18.17	■□□□□ 0.5
CPT1C-223	ENST00000600944	CLP1	Q92989	425 aa	Known RBP	18.17	■□□□□ 0.5
CPT1C-223	ENST00000600944	RIPOR3	Q96MK2	946 aa		18.17	■□□□□ 0.5
CPT1C-223	ENST00000600944	ABCB11	O95342	1321 aa		18.17	■□□□□ 0.5
CPT1C-223	ENST00000600944	CCDC171	Q6TFL3	1326 aa		18.17	■□□□□ 0.5
CPT1C-223	ENST00000600944	KIAA1217	Q5T5P2	1943 aa		18.16	■□□□□ 0.5
CPT1C-223	ENST00000600944	NR3C2	P08235	984 aa		18.16	■□□□□ 0.5
CPT1C-223	ENST00000600944	LINC00271	P0C7V0	271 aa		18.16	■□□□□ 0.5
CPT1C-223	ENST00000600944	GOLGA8H	P0CJ92	632 aa		18.16	■□□□□ 0.5
CPT1C-223	ENST00000600944	GHR	P10912	638 aa		18.16	■□□□□ 0.5
CPT1C-223	ENST00000600944	NBL1	P41271	181 aa		18.16	■□□□□ 0.5
CPT1C-223	ENST00000600944	CDC37	Q16543	378 aa	Predicted RBP	18.16	■□□□□ 0.5
CPT1C-223	ENST00000600944	MICAL1	Q8TDZ2	1067 aa		18.16	■□□□□ 0.5
CPT1C-223	ENST00000600944	CPVL	Q9H3G5	476 aa		18.16	■□□□□ 0.5
CPT1C-223	ENST00000600944	MLXIP	Q9HAP2	919 aa		18.16	■□□□□ 0.5
CPT1C-223	ENST00000600944		H3BRB1	525 aa		18.15	■□□□□ 0.5
CPT1C-223	ENST00000600944	DHX16	O60231	1041 aa	Known RBP	18.15	■□□□□ 0.5
CPT1C-223	ENST00000600944	ITGB1	P05556	798 aa		18.15	■□□□□ 0.5
CPT1C-223	ENST00000600944	GNAT1	P11488	350 aa		18.15	■□□□□ 0.5
CPT1C-223	ENST00000600944	DNAJB1	P25685	340 aa		18.15	■□□□□ 0.5
CPT1C-223	ENST00000600944	CAMK1	Q14012	370 aa		18.15	■□□□□ 0.5
CPT1C-223	ENST00000600944	CELF3	Q5SZQ8	465 aa	Known RBP	18.15	■□□□□ 0.5
CPT1C-223	ENST00000600944	MYSM1	Q5VVJ2	828 aa		18.15	■□□□□ 0.5
CPT1C-223	ENST00000600944	POF1B	Q8WVV4	589 aa		18.15	■□□□□ 0.5
CPT1C-223	ENST00000600944	C16orf70	Q9BSU1	422 aa		18.15	■□□□□ 0.5
CPT1C-223	ENST00000600944	UBA5	Q9GZZ9	404 aa		18.15	■□□□□ 0.5
CPT1C-223	ENST00000600944	RNPEP	Q9H4A4	650 aa		18.15	■□□□□ 0.5
CPT1C-223	ENST00000600944	TUT1	Q9H6E5	874 aa	Known RBP	18.15	■□□□□ 0.5
CPT1C-223	ENST00000600944	TLE6	Q9H808	572 aa		18.15	■□□□□ 0.5
CPT1C-223	ENST00000600944	NOP56	O00567	594 aa	Known RBP	18.14	■□□□□ 0.49
CPT1C-223	ENST00000600944	PPFIA3	O75145	1194 aa		18.14	■□□□□ 0.49
CPT1C-223	ENST00000600944	RGS20	O76081	388 aa		18.14	■□□□□ 0.49
CPT1C-223	ENST00000600944	GLP2R	O95838	553 aa		18.14	■□□□□ 0.49
CPT1C-223	ENST00000600944	CFB	P00751	764 aa		18.14	■□□□□ 0.49
CPT1C-223	ENST00000600944	HOXD8	P13378	290 aa	Predicted RBP	18.14	■□□□□ 0.49
CPT1C-223	ENST00000600944	NOV	P48745	357 aa		18.14	■□□□□ 0.49
CPT1C-223	ENST00000600944	PAN2	Q504Q3	1202 aa	Known RBP	18.14	■□□□□ 0.49
CPT1C-223	ENST00000600944	MCTP2	Q6DN12	878 aa		18.14	■□□□□ 0.49
CPT1C-223	ENST00000600944	KLHL23	Q8NBE8	558 aa		18.14	■□□□□ 0.49
CPT1C-223	ENST00000600944	P2RX5	Q93086	422 aa		18.14	■□□□□ 0.49
CPT1C-223	ENST00000600944	PXMP2	Q9NR77	195 aa		18.14	■□□□□ 0.49
CPT1C-223	ENST00000600944	TSHZ2	Q9NRE2	1034 aa		18.14	■□□□□ 0.49
CPT1C-223	ENST00000600944	SETD4	Q9NVD3	440 aa		18.14	■□□□□ 0.49
CPT1C-223	ENST00000600944	DDX19B	Q9UMR2	479 aa		18.14	■□□□□ 0.49
CPT1C-223	ENST00000600944	PCDHGC5	Q9Y5F6	944 aa		18.14	■□□□□ 0.49
CPT1C-223	ENST00000600944	MRPL42	Q9Y6G3	142 aa	Known RBP	18.14	■□□□□ 0.49
CPT1C-223	ENST00000600944	ORC4	O43929	436 aa		18.13	■□□□□ 0.49
CPT1C-223	ENST00000600944	LGALS2	P05162	132 aa		18.13	■□□□□ 0.49
CPT1C-223	ENST00000600944	IBSP	P21815	317 aa	Predicted RBP	18.13	■□□□□ 0.49
CPT1C-223	ENST00000600944	ARHGAP4	P98171	946 aa		18.13	■□□□□ 0.49
CPT1C-223	ENST00000600944	GPATCH4	Q5T3I0	446 aa	Known RBP	18.13	■□□□□ 0.49
CPT1C-223	ENST00000600944	KCNV1	Q6PIU1	500 aa		18.13	■□□□□ 0.49
CPT1C-223	ENST00000600944	SPPL3	Q8TCT6	385 aa		18.13	■□□□□ 0.49
CPT1C-223	ENST00000600944	RC3H2	Q9HBD1	1191 aa	Known RBP	18.13	■□□□□ 0.49
CPT1C-223	ENST00000600944	MRPL11	Q9Y3B7	192 aa	Known RBP	18.13	■□□□□ 0.49
CPT1C-223	ENST00000600944	MYH7B	A7E2Y1	1941 aa		18.13	■□□□□ 0.49
CPT1C-223	ENST00000600944	PER2	O15055	1255 aa		18.12	■□□□□ 0.49
CPT1C-223	ENST00000600944	HSPD1	P10809	573 aa	Known RBP	18.12	■□□□□ 0.49
CPT1C-223	ENST00000600944	MS4A1	P11836	297 aa		18.12	■□□□□ 0.49
CPT1C-223	ENST00000600944	ATF7	P17544	494 aa	Predicted RBP	18.12	■□□□□ 0.49
CPT1C-223	ENST00000600944	UBA1	P22314	1058 aa	Known RBP	18.12	■□□□□ 0.49
CPT1C-223	ENST00000600944	RBM10	P98175	930 aa	Known RBP	18.12	■□□□□ 0.49
CPT1C-223	ENST00000600944	TMEM105	Q8N8V8	129 aa		18.12	■□□□□ 0.49
CPT1C-223	ENST00000600944	KREMEN2	Q8NCW0	462 aa		18.12	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms