RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 hCG_1642624A0A1W2PR95 340 aa18.14■□□□□ 0.49
VRK3-221ENST00000600284 C17orf102A2RUQ5 167 aa18.14■□□□□ 0.49
VRK3-221ENST00000600284 RABGGTBP53611 331 aa18.14■□□□□ 0.49
VRK3-221ENST00000600284 FUT2Q10981 343 aa18.14■□□□□ 0.49
VRK3-221ENST00000600284 RTN1Q16799 776 aa18.14■□□□□ 0.49
VRK3-221ENST00000600284 PPP1R18Q6NYC8 613 aa18.14■□□□□ 0.49
VRK3-221ENST00000600284 CNKSR3Q6P9H4 555 aa18.14■□□□□ 0.49
VRK3-221ENST00000600284 HEATR3Q7Z4Q2 680 aa18.14■□□□□ 0.49
VRK3-221ENST00000600284 SERINC5Q86VE9 423 aa18.14■□□□□ 0.49
VRK3-221ENST00000600284 PRDM12Q9H4Q4 367 aa18.14■□□□□ 0.49
VRK3-221ENST00000600284 PCDHA6Q9UN73 950 aa18.14■□□□□ 0.49
VRK3-221ENST00000600284 PCDHA8Q9Y5H6 950 aa18.14■□□□□ 0.49
VRK3-221ENST00000600284 SCN5AQ14524 2016 aa18.14■□□□□ 0.49
VRK3-221ENST00000600284 TANC1Q9C0D5 1861 aa18.14■□□□□ 0.49
VRK3-221ENST00000600284 KIF28PB7ZC32 967 aa18.13■□□□□ 0.49
VRK3-221ENST00000600284 EFCAB14O75071 495 aa18.13■□□□□ 0.49
VRK3-221ENST00000600284 GNAT1P11488 350 aa18.13■□□□□ 0.49
VRK3-221ENST00000600284 ZNF200P98182 395 aaPredicted RBP18.13■□□□□ 0.49
VRK3-221ENST00000600284 PPP2R2DQ66LE6 453 aa18.13■□□□□ 0.49
VRK3-221ENST00000600284 TCEANC2Q96MN5 208 aa18.13■□□□□ 0.49
VRK3-221ENST00000600284 GLT8D2Q9H1C3 349 aa18.13■□□□□ 0.49
VRK3-221ENST00000600284 RNPEPQ9H4A4 650 aa18.13■□□□□ 0.49
VRK3-221ENST00000600284 ZNF215Q9UL58 517 aaPredicted RBP18.13■□□□□ 0.49
VRK3-221ENST00000600284 UBIAD1Q9Y5Z9 338 aa18.13■□□□□ 0.49
VRK3-221ENST00000600284 CNTNAP5Q8WYK1 1306 aa18.13■□□□□ 0.49
VRK3-221ENST00000600284 TRIP12Q14669 1992 aaPredicted RBP18.13■□□□□ 0.49
VRK3-221ENST00000600284 A0A0C4DFX4 3053 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 KLF18A0A0U1RQI7 1052 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 CCDC196A0A1B0GTZ2 297 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 ABHD14A-ACY1A0A1B0GW23 586 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 NBNO60934 754 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 CAND2O75155 1236 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 FOSP01100 380 aaPredicted RBP18.12■□□□□ 0.49
VRK3-221ENST00000600284 SMIM10L2AP0DMW4 78 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 SMIM10L2BP0DMW5 78 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 ITGB5P18084 799 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 HSPA4P34932 840 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 KCNJ6P48051 423 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 HIC1Q14526 733 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 UBE2SQ16763 222 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 ZNF618Q5T7W0 954 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 WWC2Q6AWC2 1192 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 TRAF7Q6Q0C0 670 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 HERC6Q8IVU3 1022 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 FBXL16Q8N461 479 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 ATP6V0A1Q93050 837 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 RIC8AQ9NPQ8 531 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 V9GY48 417 aaPredicted RBP18.12■□□□□ 0.49
VRK3-221ENST00000600284 EMSYQ7Z589 1322 aa18.12■□□□□ 0.49
VRK3-221ENST00000600284 GOLGA8AA7E2F4 631 aa18.11■□□□□ 0.49
VRK3-221ENST00000600284 GOLGA8BA8MQT2 603 aa18.11■□□□□ 0.49
VRK3-221ENST00000600284 EPB41L2O43491 1005 aaKnown RBP18.11■□□□□ 0.49
VRK3-221ENST00000600284 REC8O95072 547 aa18.11■□□□□ 0.49
VRK3-221ENST00000600284 MYOGP15173 224 aa18.11■□□□□ 0.49
VRK3-221ENST00000600284 KCNA2P16389 499 aa18.11■□□□□ 0.49
VRK3-221ENST00000600284 NAPAP54920 295 aa18.11■□□□□ 0.49
VRK3-221ENST00000600284 FGD1P98174 961 aa18.11■□□□□ 0.49
VRK3-221ENST00000600284 MTMR1Q13613 665 aa18.11■□□□□ 0.49
VRK3-221ENST00000600284 WNT8BQ93098 351 aa18.11■□□□□ 0.49
VRK3-221ENST00000600284 JADE2Q9NQC1 790 aa18.11■□□□□ 0.49
VRK3-221ENST00000600284 FAM217BQ9NTX9 383 aaPredicted RBP18.11■□□□□ 0.49
VRK3-221ENST00000600284 RSPH10B2B2RC85 870 aa18.1■□□□□ 0.49
VRK3-221ENST00000600284 ATP9AO75110 1047 aa18.1■□□□□ 0.49
VRK3-221ENST00000600284 RSPH10BP0C881 870 aa18.1■□□□□ 0.49
VRK3-221ENST00000600284 WDR5P61964 334 aaKnown RBP18.1■□□□□ 0.49
VRK3-221ENST00000600284 IKBKEQ14164 716 aa18.1■□□□□ 0.49
VRK3-221ENST00000600284 SEPT1Q8WYJ6 367 aa18.1■□□□□ 0.49
VRK3-221ENST00000600284 BARHL2Q9NY43 387 aa18.1■□□□□ 0.49
VRK3-221ENST00000600284 SNX14Q9Y5W7 946 aa18.1■□□□□ 0.49
VRK3-221ENST00000600284 TET1Q8NFU7 2136 aa18.1■□□□□ 0.49
VRK3-221ENST00000600284 NRCAMQ92823 1304 aa18.09■□□□□ 0.49
VRK3-221ENST00000600284 STXBP3O00186 592 aa18.09■□□□□ 0.49
VRK3-221ENST00000600284 TREHO43280 583 aa18.09■□□□□ 0.49
VRK3-221ENST00000600284 LGR5O75473 907 aa18.09■□□□□ 0.49
VRK3-221ENST00000600284 CA3P07451 260 aa18.09■□□□□ 0.49
VRK3-221ENST00000600284 PSMA5P28066 241 aa18.09■□□□□ 0.49
VRK3-221ENST00000600284 CDC27P30260 824 aa18.09■□□□□ 0.49
VRK3-221ENST00000600284 TCF7P36402 384 aaPredicted RBP18.09■□□□□ 0.49
VRK3-221ENST00000600284 THPOP40225 353 aa18.09■□□□□ 0.49
VRK3-221ENST00000600284 METAP2P50579 478 aaKnown RBP eCLIP18.09■□□□□ 0.49
VRK3-221ENST00000600284 ADCY7P51828 1080 aa18.09■□□□□ 0.49
VRK3-221ENST00000600284 ADAM17P78536 824 aa18.09■□□□□ 0.49
VRK3-221ENST00000600284 ADGRE1Q14246 886 aa18.09■□□□□ 0.49
VRK3-221ENST00000600284 UTP14CQ5TAP6 766 aaKnown RBP18.09■□□□□ 0.49
VRK3-221ENST00000600284 TYW1BQ6NUM6 668 aa18.09■□□□□ 0.49
VRK3-221ENST00000600284 BLOC1S2Q6QNY1 142 aa18.09■□□□□ 0.49
VRK3-221ENST00000600284 JAKMIP1Q96N16 626 aaKnown RBP18.09■□□□□ 0.49
VRK3-221ENST00000600284 MXRA8Q9BRK3 442 aa18.09■□□□□ 0.49
VRK3-221ENST00000600284 UNC80Q8N2C7 3258 aa18.08■□□□□ 0.49
VRK3-221ENST00000600284 GBF1Q92538 1859 aa18.08■□□□□ 0.49
VRK3-221ENST00000600284 CHD9Q3L8U1 2897 aa18.08■□□□□ 0.48
VRK3-221ENST00000600284 SMCO2A6NFE2 343 aa18.08■□□□□ 0.48
VRK3-221ENST00000600284 SP4Q02446 784 aa18.08■□□□□ 0.48
VRK3-221ENST00000600284 AP3B2Q13367 1082 aa18.08■□□□□ 0.48
VRK3-221ENST00000600284 MBTPS1Q14703 1052 aa18.08■□□□□ 0.48
VRK3-221ENST00000600284 Q6ZUG5 572 aa18.08■□□□□ 0.48
VRK3-221ENST00000600284 AGXT2Q9BYV1 514 aa18.08■□□□□ 0.48
VRK3-221ENST00000600284 SETD4Q9NVD3 440 aa18.08■□□□□ 0.48
VRK3-221ENST00000600284 EYSQ5T1H1 3165 aa18.07■□□□□ 0.48
VRK3-221ENST00000600284 GSTTP1A0A1W2PQM5 241 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms