RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 RPA1P27694 616 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 KCNJ6P48051 423 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 RBL2Q08999 1139 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 COASYQ13057 564 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 PRKG1Q13976 671 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 PPP1R9AQ9ULJ8 1098 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 BICDL2A1A5D9 508 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 PPP1R12BO60237 982 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 CYP11B2P19099 503 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 PPP1R2P41236 205 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 TERF1P54274 439 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 SLC12A3P55017 1021 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 BACE1P56817 501 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 CACNB1Q02641 598 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 LRRC41Q15345 812 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 CEP55Q53EZ4 464 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 MUM1L1Q5H9M0 696 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 CST9Q5W186 159 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 CENPPQ6IPU0 288 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 GPBP1Q86WP2 473 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 ANKRD20A12PQ8NF67 263 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 ERMNQ8TAM6 284 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 SSC5DA1L4H1 1573 aa18.99■□□□□ 0.63
SHKBP1-216ENST00000598201 NRDCO43847 1150 aa18.98■□□□□ 0.63
SHKBP1-216ENST00000598201 PSMD10O75832 226 aa18.98■□□□□ 0.63
SHKBP1-216ENST00000598201 ALAS1P13196 640 aa18.98■□□□□ 0.63
SHKBP1-216ENST00000598201 TNNT1P13805 278 aa18.98■□□□□ 0.63
SHKBP1-216ENST00000598201 EEF1GP26641 437 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-216ENST00000598201 USP14P54578 494 aa18.98■□□□□ 0.63
SHKBP1-216ENST00000598201 CYP4A11Q02928 519 aa18.98■□□□□ 0.63
SHKBP1-216ENST00000598201 ARSHQ5FYA8 562 aa18.98■□□□□ 0.63
SHKBP1-216ENST00000598201 NYAP1Q6ZVC0 841 aa18.98■□□□□ 0.63
SHKBP1-216ENST00000598201 ZNF280CQ8ND82 737 aa18.98■□□□□ 0.63
SHKBP1-216ENST00000598201 CPLX3Q8WVH0 158 aa18.98■□□□□ 0.63
SHKBP1-216ENST00000598201 WNK4Q96J92 1243 aa18.98■□□□□ 0.63
SHKBP1-216ENST00000598201 HOMER2Q9NSB8 354 aa18.98■□□□□ 0.63
SHKBP1-216ENST00000598201 PANK4Q9NVE7 773 aa18.98■□□□□ 0.63
SHKBP1-216ENST00000598201 ARP10275 920 aa18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 RAD51AP2Q09MP3 1159 aa18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 OTOP1Q7RTM1 612 aa18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 GUF1Q8N442 669 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 NOC3LQ8WTT2 800 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 SLC5A5Q92911 643 aa18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 BAG1Q99933 345 aaPredicted RBP18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 EIF2AK1Q9BQI3 630 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 FGFBP2Q9BYJ0 223 aa18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 EHMT1Q9H9B1 1298 aa18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 PICK1Q9NRD5 415 aa18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 RGL1Q9NZL6 768 aa18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 ZHX2Q9Y6X8 837 aa18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 AKR1B15C9JRZ8 316 aaPredicted RBP18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 NKRFO15226 690 aaKnown RBP eCLIP18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 GYPCP04921 128 aa18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 PSMD2Q13200 908 aa18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 PABPC4Q13310 644 aaKnown RBP eCLIP18.97■□□□□ 0.631e-9■■■■□ 22.8
SHKBP1-216ENST00000598201 TTLL12Q14166 644 aaPredicted RBP18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 LRCH2Q5VUJ6 765 aa18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 KLRG1Q96E93 195 aa18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 PPP1R13BQ96KQ4 1090 aa18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 ITIH6Q6UXX5 1313 aa18.97■□□□□ 0.63
SHKBP1-216ENST00000598201 USP2O75604 605 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 PPFIBP1Q86W92 1011 aa18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 IL31RAQ8NI17 732 aa18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 GBA2Q9HCG7 927 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 BMP2KQ9NSY1 1161 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 TBC1D7Q9P0N9 293 aa18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 PCDHA2Q9Y5H9 948 aa18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 RPTORQ8N122 1335 aa18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 LGALS16A8MUM7 142 aa18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 CASP14P31944 242 aa18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 FXR1P51114 621 aaKnown RBP eCLIP18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 HMGCS2P54868 508 aa18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 GHRHRQ02643 423 aa18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 UBXN1Q04323 297 aa18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 FAM26FQ5R3K3 315 aa18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 C2orf69Q8N8R5 385 aa18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 ZNF507Q8TCN5 953 aa18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 ATG4CQ96DT6 458 aa18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 CNOT6LQ96LI5 555 aaKnown RBP18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 POLR3CQ9BUI4 534 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 AS3MTQ9HBK9 375 aa18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 MAGEC2Q9UBF1 373 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 DNM3Q9UQ16 869 aa18.96■□□□□ 0.63
SHKBP1-216ENST00000598201 RNF225M0QZC1 329 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-216ENST00000598201 VWA5AO00534 786 aa18.95■□□□□ 0.62
SHKBP1-216ENST00000598201 CHMP2AO43633 222 aa18.95■□□□□ 0.62
SHKBP1-216ENST00000598201 ITGB5P18084 799 aa18.95■□□□□ 0.62
SHKBP1-216ENST00000598201 PPP2R5CQ13362 524 aa18.95■□□□□ 0.62
SHKBP1-216ENST00000598201 MOB2Q70IA6 237 aa18.95■□□□□ 0.62
SHKBP1-216ENST00000598201 SYT2Q8N9I0 419 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-216ENST00000598201 PRIMPOLQ96LW4 560 aa18.95■□□□□ 0.62
SHKBP1-216ENST00000598201 HSD17B14Q9BPX1 270 aa18.95■□□□□ 0.62
SHKBP1-216ENST00000598201 UQCRHLA0A096LP55 91 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 ARHGAP6O43182 974 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 STX10O60499 249 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 MFAP3LO75121 409 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 UQCRHP07919 91 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 FKBP1BP68106 108 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 PTPN14Q15678 1187 aa18.94■□□□□ 0.62
SHKBP1-216ENST00000598201 ARMC9Q7Z3E5 817 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms