RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 PCDHA6Q9UN73 950 aa9.52□□□□□ -0.89
SIN3B-208ENST00000596638 PLAGL2Q9UPG8 496 aa9.52□□□□□ -0.89
SIN3B-208ENST00000596638 PCDHA8Q9Y5H6 950 aa9.52□□□□□ -0.89
SIN3B-208ENST00000596638 THSD7BQ9C0I4 1608 aa9.52□□□□□ -0.89
SIN3B-208ENST00000596638 ROBO3Q96MS0 1386 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 TRIM49BA6NDI0 452 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 GOLGA6BA6NDN3 693 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 B4DLN1 442 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 PDE2AO00408 941 aaPredicted RBP9.51□□□□□ -0.89
SIN3B-208ENST00000596638 PITPNM1O00562 1244 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 TFRCP02786 760 aaKnown RBP9.51□□□□□ -0.89
SIN3B-208ENST00000596638 IDEP14735 1019 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 IL1R1P14778 569 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 GGCXP38435 758 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 IRAK1P51617 712 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 PMS1P54277 932 aaKnown RBP9.51□□□□□ -0.89
SIN3B-208ENST00000596638 EPHB4P54760 987 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 DYNLL1P63167 89 aaKnown RBP9.51□□□□□ -0.89
SIN3B-208ENST00000596638 PRKG1Q13976 671 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 MIIPQ5JXC2 388 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 CENPPQ6IPU0 288 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 CCDC84Q86UT8 332 aaPredicted RBP9.51□□□□□ -0.89
SIN3B-208ENST00000596638 CABP7Q86V35 215 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 SUGP1Q8IWZ8 645 aaKnown RBP9.51□□□□□ -0.89
SIN3B-208ENST00000596638 CD302Q8IX05 232 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 EIF1ADQ8N9N8 165 aaKnown RBP9.51□□□□□ -0.89
SIN3B-208ENST00000596638 CAGE1Q8TC20 777 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.51□□□□□ -0.89
SIN3B-208ENST00000596638 SYN2Q92777 582 aaPredicted RBP9.51□□□□□ -0.89
SIN3B-208ENST00000596638 NSUN4Q96CB9 384 aaKnown RBP9.51□□□□□ -0.89
SIN3B-208ENST00000596638 FAM84BQ96KN1 310 aaPredicted RBP9.51□□□□□ -0.89
SIN3B-208ENST00000596638 CNOT6LQ96LI5 555 aaKnown RBP9.51□□□□□ -0.89
SIN3B-208ENST00000596638 CCDC42Q96M95 316 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 LRRC27Q9C0I9 530 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 LACRTQ9GZZ8 138 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 NUCKS1Q9H1E3 243 aaKnown RBP9.51□□□□□ -0.89
SIN3B-208ENST00000596638 SH2D4AQ9H788 454 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 YY1AP1Q9H869 796 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 DCP1AQ9NPI6 582 aaPredicted RBP9.51□□□□□ -0.89
SIN3B-208ENST00000596638 HYOU1Q9Y4L1 999 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 PCDHA13Q9Y5I0 950 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 CASP8AP2Q9UKL3 1982 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 FLT1P17948 1338 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 PITPNM2Q9BZ72 1349 aa9.51□□□□□ -0.89
SIN3B-208ENST00000596638 ZNF646O15015 1829 aaPredicted RBP9.5□□□□□ -0.89
SIN3B-208ENST00000596638 SSU72P8A0A1W2PR75 194 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 hCG_1642624A0A1W2PR95 340 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 RCCD1A6NED2 376 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 CCDC85CA6NKD9 419 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 F8W031 263 aaPredicted RBP9.5□□□□□ -0.89
SIN3B-208ENST00000596638 ENC1O14682 589 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 SLC26A4O43511 780 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 TRIM21P19474 475 aaKnown RBP9.5□□□□□ -0.89
SIN3B-208ENST00000596638 MTIF2P46199 727 aaKnown RBP9.5□□□□□ -0.89
SIN3B-208ENST00000596638 RGS19P49795 217 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 PSMD2Q13200 908 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 MAN2A1Q16706 1144 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 VWA3BQ502W6 1294 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 LDLRAD1Q5T700 205 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 ICE2Q659A1 982 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 SPTY2D1Q68D10 685 aaPredicted RBP9.5□□□□□ -0.89
SIN3B-208ENST00000596638 ANKRD40Q6AI12 368 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 FOXR1Q6PIV2 292 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 OGFOD1Q8N543 542 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 MREGQ8N565 214 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 ZNF384Q8TF68 577 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 ALS2CR12Q96Q35 445 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 PAGR1Q9BTK6 254 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 NOC4LQ9BVI4 516 aaKnown RBP9.5□□□□□ -0.89
SIN3B-208ENST00000596638 TRIM9Q9C026 710 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 KAT14Q9H8E8 782 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 AGPAT5Q9NUQ2 364 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 BARHL2Q9NY43 387 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 STK17AQ9UEE5 414 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 ABCF2Q9UG63 623 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 SIK3Q9Y2K2 1263 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 FAM205AQ6ZU69 1335 aa9.5□□□□□ -0.89
SIN3B-208ENST00000596638 PDE4DIPQ5VU43 2346 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 BAZ2AQ9UIF9 1905 aaKnown RBP9.49□□□□□ -0.89
SIN3B-208ENST00000596638 CYP2D7A0A087X1C5 515 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 ESYT2A0FGR8 921 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 GRID2IPA4D2P6 1211 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 PALM3A6NDB9 673 aaPredicted RBP9.49□□□□□ -0.89
SIN3B-208ENST00000596638 GOLGA6CA6NDK9 693 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 RBAK-RBAKDNI3L0D1 243 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 hCG_1984214I3L0E3 225 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 HAX1O00165 279 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 STXBP3O00186 592 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 EBAG9O00559 213 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 CA12O43570 354 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 ZEB2O60315 1214 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 SRGAP2O75044 1071 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 COBLO75128 1261 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 OR52Z1P0C646 297 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 GOLGA6DP0CG33 693 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 PAFAH1B1P43034 410 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 GYG1P46976 350 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 TM4SF4P48230 202 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 LRRC63Q05C16 580 aa9.49□□□□□ -0.89
SIN3B-208ENST00000596638 PDE4DQ08499 809 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms