RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 RHOXF2BP0C7M4 288 aa25.15■■□□□ 1.62
SRRM1-222ENST00000596378 SLC12A3P55017 1021 aa25.15■■□□□ 1.62
SRRM1-222ENST00000596378 WHAMMP3Q1A5X7 153 aa25.15■■□□□ 1.62
SRRM1-222ENST00000596378 SCFD1Q8WVM8 642 aa25.15■■□□□ 1.62
SRRM1-222ENST00000596378 CCDC42Q96M95 316 aa25.15■■□□□ 1.62
SRRM1-222ENST00000596378 RHOXF2Q9BQY4 288 aa25.15■■□□□ 1.62
SRRM1-222ENST00000596378 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.15■■□□□ 1.621e-6■■■■■ 31.8
SRRM1-222ENST00000596378 PRR12Q9ULL5 1215 aa25.15■■□□□ 1.62
SRRM1-222ENST00000596378 PLAGL2Q9UPG8 496 aa25.15■■□□□ 1.62
SRRM1-222ENST00000596378 COL4A3BPQ9Y5P4 624 aa25.15■■□□□ 1.62
SRRM1-222ENST00000596378 MACROD2A1Z1Q3 448 aa25.14■■□□□ 1.62
SRRM1-222ENST00000596378 IPO7O95373 1038 aaKnown RBP25.14■■□□□ 1.62
SRRM1-222ENST00000596378 FKBP3Q00688 224 aaKnown RBP25.14■■□□□ 1.62
SRRM1-222ENST00000596378 PABPC4Q13310 644 aaKnown RBP eCLIP25.14■■□□□ 1.62
SRRM1-222ENST00000596378 CCDC40Q4G0X9 1142 aa25.14■■□□□ 1.62
SRRM1-222ENST00000596378 MOXD1Q6UVY6 613 aa25.14■■□□□ 1.62
SRRM1-222ENST00000596378 SLC30A10Q6XR72 485 aa25.14■■□□□ 1.62
SRRM1-222ENST00000596378 RRAGAQ7L523 313 aa25.14■■□□□ 1.62
SRRM1-222ENST00000596378 ACER1Q8TDN7 264 aa25.14■■□□□ 1.62
SRRM1-222ENST00000596378 CTAGE15A4D2H0 777 aa25.14■■□□□ 1.61
SRRM1-222ENST00000596378 KRT86O43790 486 aa25.14■■□□□ 1.61
SRRM1-222ENST00000596378 CTAGE8P0CG41 777 aa25.14■■□□□ 1.61
SRRM1-222ENST00000596378 SREBF1P36956 1147 aa25.14■■□□□ 1.61
SRRM1-222ENST00000596378 TRAPPC11Q7Z392 1133 aa25.14■■□□□ 1.61
SRRM1-222ENST00000596378 CTAGE6Q86UF2 777 aa25.14■■□□□ 1.61
SRRM1-222ENST00000596378 CTAGE4Q8IX94 777 aa25.14■■□□□ 1.61
SRRM1-222ENST00000596378 NOA1Q8NC60 698 aaKnown RBP25.14■■□□□ 1.61
SRRM1-222ENST00000596378 TNS1Q9HBL0 1735 aaKnown RBP25.13■■□□□ 1.61
SRRM1-222ENST00000596378 CDK17Q00537 523 aa25.13■■□□□ 1.61
SRRM1-222ENST00000596378 KCNMA1Q12791 1236 aa25.13■■□□□ 1.61
SRRM1-222ENST00000596378 Q4G0T1 1027 aa25.13■■□□□ 1.61
SRRM1-222ENST00000596378 ARFGAP3Q9NP61 516 aa25.13■■□□□ 1.61
SRRM1-222ENST00000596378 MSH4O15457 936 aa25.13■■□□□ 1.61
SRRM1-222ENST00000596378 RAD17O75943 681 aa25.13■■□□□ 1.61
SRRM1-222ENST00000596378 SPATA31C1P0DKV0 1188 aa25.13■■□□□ 1.61
SRRM1-222ENST00000596378 CASP5P51878 434 aa25.13■■□□□ 1.61
SRRM1-222ENST00000596378 CYP4A11Q02928 519 aa25.13■■□□□ 1.61
SRRM1-222ENST00000596378 HAUS3Q68CZ6 603 aa25.13■■□□□ 1.61
SRRM1-222ENST00000596378 ZNF772Q68DY9 489 aaPredicted RBP25.13■■□□□ 1.61
SRRM1-222ENST00000596378 CCDC84Q86UT8 332 aaPredicted RBP25.13■■□□□ 1.61
SRRM1-222ENST00000596378 POLD4Q9HCU8 107 aa25.13■■□□□ 1.61
SRRM1-222ENST00000596378 HNRNPH3P31942 346 aaKnown RBP25.12■■□□□ 1.61
SRRM1-222ENST00000596378 EIF4A3P38919 411 aaKnown RBP25.12■■□□□ 1.61
SRRM1-222ENST00000596378 CDAN1Q8IWY9 1227 aa25.12■■□□□ 1.61
SRRM1-222ENST00000596378 BAP1Q92560 729 aa25.12■■□□□ 1.61
SRRM1-222ENST00000596378 EMILIN3Q9NT22 766 aa25.12■■□□□ 1.61
SRRM1-222ENST00000596378 APBA1Q02410 837 aa25.12■■□□□ 1.61
SRRM1-222ENST00000596378 BTNL9Q6UXG8 535 aa25.12■■□□□ 1.61
SRRM1-222ENST00000596378 ZNF662Q6ZS27 426 aa25.12■■□□□ 1.61
SRRM1-222ENST00000596378 TBC1D5Q92609 795 aa25.12■■□□□ 1.61
SRRM1-222ENST00000596378 KCTD10Q9H3F6 313 aa25.12■■□□□ 1.61
SRRM1-222ENST00000596378 MMP14P50281 582 aa25.11■■□□□ 1.61
SRRM1-222ENST00000596378 KIF11P52732 1056 aa25.11■■□□□ 1.61
SRRM1-222ENST00000596378 VAV2P52735 878 aa25.11■■□□□ 1.61
SRRM1-222ENST00000596378 GABPB1Q06547 395 aaPredicted RBP25.11■■□□□ 1.61
SRRM1-222ENST00000596378 PDGFDQ9GZP0 370 aaPredicted RBP25.11■■□□□ 1.61
SRRM1-222ENST00000596378 BCAS3Q9H6U6 928 aa25.11■■□□□ 1.61
SRRM1-222ENST00000596378 SPDYE2BA6NHP3 402 aa25.11■■□□□ 1.61
SRRM1-222ENST00000596378 SPDYE6P0CI01 402 aa25.11■■□□□ 1.61
SRRM1-222ENST00000596378 SPA17Q15506 151 aa25.11■■□□□ 1.61
SRRM1-222ENST00000596378 SLC15A2Q16348 729 aa25.11■■□□□ 1.61
SRRM1-222ENST00000596378 FAM83BQ5T0W9 1011 aa25.11■■□□□ 1.61
SRRM1-222ENST00000596378 NEK11Q8NG66 645 aa25.11■■□□□ 1.61
SRRM1-222ENST00000596378 CAPZA3Q96KX2 299 aa25.11■■□□□ 1.61
SRRM1-222ENST00000596378 CRACR2AQ9BSW2 395 aa25.11■■□□□ 1.61
SRRM1-222ENST00000596378 NLRC4Q9NPP4 1024 aa25.11■■□□□ 1.61
SRRM1-222ENST00000596378 ZBTB12Q9Y330 459 aaPredicted RBP25.11■■□□□ 1.61
SRRM1-222ENST00000596378 EZH2Q15910 746 aaKnown RBP25.1■■□□□ 1.61
SRRM1-222ENST00000596378 CCDC174Q6PII3 467 aa25.1■■□□□ 1.61
SRRM1-222ENST00000596378 SAMD1Q6SPF0 538 aaPredicted RBP25.1■■□□□ 1.61
SRRM1-222ENST00000596378 MSANTD4Q8NCY6 345 aa25.1■■□□□ 1.61
SRRM1-222ENST00000596378 IQCDQ96DY2 449 aa25.1■■□□□ 1.61
SRRM1-222ENST00000596378 FRMD3A2A2Y4 597 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 CCDC151A5D8V7 595 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 FOSP01100 380 aaPredicted RBP25.09■■□□□ 1.61
SRRM1-222ENST00000596378 RPA1P27694 616 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 ZNF76P36508 570 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 STAT2P52630 851 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 KIF5AQ12840 1032 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 GIT2Q14161 759 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 ZYXQ15942 572 aaKnown RBP25.09■■□□□ 1.61
SRRM1-222ENST00000596378 LONRF2Q1L5Z9 754 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 FOXR2Q6PJQ5 311 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 REEP2Q9BRK0 252 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 FUT8Q9BYC5 575 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 IFIH1Q9BYX4 1025 aaKnown RBP25.09■■□□□ 1.61
SRRM1-222ENST00000596378 DEF6Q9H4E7 631 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 VAV3Q9UKW4 847 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 SAR1BQ9Y6B6 198 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 TBX3O15119 743 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 HOXA7P31268 230 aaPredicted RBP25.09■■□□□ 1.61
SRRM1-222ENST00000596378 CACNA2D4Q7Z3S7 1137 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 ERMNQ8TAM6 284 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 PURBQ96QR8 312 aaKnown RBP25.09■■□□□ 1.61
SRRM1-222ENST00000596378 MMS19Q96T76 1030 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 RNF216Q9NWF9 866 aaPredicted RBP25.09■■□□□ 1.61
SRRM1-222ENST00000596378 TMOD2Q9NZR1 351 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 DNM3Q9UQ16 869 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 PCDHA13Q9Y5I0 950 aa25.09■■□□□ 1.61
SRRM1-222ENST00000596378 EML1O00423 815 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms