RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 FAM228BP0C875 321 aa19.12■□□□□ 0.65
ARHGEF1-213ENST00000595897 PSMD2Q13200 908 aa19.12■□□□□ 0.65
ARHGEF1-213ENST00000595897 PTGISQ16647 500 aa19.12■□□□□ 0.65
ARHGEF1-213ENST00000595897 MEI1Q5TIA1 1274 aa19.12■□□□□ 0.65
ARHGEF1-213ENST00000595897 NELFCDQ8IXH7 590 aa19.12■□□□□ 0.65
ARHGEF1-213ENST00000595897 ZNF473Q8WTR7 871 aaKnown RBP19.12■□□□□ 0.65
ARHGEF1-213ENST00000595897 NLRP3Q96P20 1036 aa19.12■□□□□ 0.65
ARHGEF1-213ENST00000595897 RREB1Q92766 1687 aa19.12■□□□□ 0.65
ARHGEF1-213ENST00000595897 HMGB1P1B2RPK0 211 aaPredicted RBP19.12■□□□□ 0.65
ARHGEF1-213ENST00000595897 MDH1P40925 334 aaKnown RBP19.12■□□□□ 0.65
ARHGEF1-213ENST00000595897 FXR2P51116 673 aaKnown RBP eCLIP19.12■□□□□ 0.652e-6■■■■□ 19.7
ARHGEF1-213ENST00000595897 KCNK18Q7Z418 384 aa19.12■□□□□ 0.65
ARHGEF1-213ENST00000595897 GPATCH11Q8N954 259 aa19.12■□□□□ 0.65
ARHGEF1-213ENST00000595897 SYN2Q92777 582 aaPredicted RBP19.12■□□□□ 0.65
ARHGEF1-213ENST00000595897 CCT8L2Q96SF2 557 aa19.12■□□□□ 0.65
ARHGEF1-213ENST00000595897 PACSIN1Q9BY11 444 aa19.12■□□□□ 0.65
ARHGEF1-213ENST00000595897 NOL4O94818 638 aa19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 SWT1Q5T5J6 900 aaKnown RBP19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 CCDC91Q7Z6B0 441 aa19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 CNPY4Q8N129 248 aa19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 INPP4AQ96PE3 977 aaPredicted RBP19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 BMP2KQ9NSY1 1161 aaPredicted RBP19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 PCDHGC5Q9Y5F6 944 aa19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 TAF1P21675 1872 aa19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 ORC2Q13416 577 aaPredicted RBP19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 RPS6KA1Q15418 735 aa19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 FAM26FQ5R3K3 315 aa19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 ARHGAP27Q6ZUM4 889 aa19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 NLRP14Q86W24 1093 aa19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 CD302Q8IX05 232 aa19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 PRPF38AQ8NAV1 312 aaKnown RBP19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 USP38Q8NB14 1042 aa19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 CABS1Q96KC9 395 aa19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 NCAPGQ9BPX3 1015 aa19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 PPANQ9NQ55 473 aaKnown RBP19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 COASYQ13057 564 aa19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 PTPROQ16827 1216 aa19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 TAF1DQ9H5J8 278 aaPredicted RBP19.11■□□□□ 0.65
ARHGEF1-213ENST00000595897 COL22A1Q8NFW1 1626 aaPredicted RBP19.1■□□□□ 0.65
ARHGEF1-213ENST00000595897 GCOM1H8Y6P7 765 aaPredicted RBP19.1■□□□□ 0.65
ARHGEF1-213ENST00000595897 MYZAPP0CAP1 466 aa19.1■□□□□ 0.65
ARHGEF1-213ENST00000595897 TNNI2P48788 182 aa19.1■□□□□ 0.65
ARHGEF1-213ENST00000595897 IFT88Q13099 833 aa19.1■□□□□ 0.65
ARHGEF1-213ENST00000595897 DDB1Q16531 1140 aa19.1■□□□□ 0.65
ARHGEF1-213ENST00000595897 MYCBPAPQ8TBZ2 947 aa19.1■□□□□ 0.65
ARHGEF1-213ENST00000595897 COA7Q96BR5 231 aa19.1■□□□□ 0.65
ARHGEF1-213ENST00000595897 PANK4Q9NVE7 773 aa19.1■□□□□ 0.65
ARHGEF1-213ENST00000595897 ATXN2Q99700 1313 aaKnown RBP19.1■□□□□ 0.65
ARHGEF1-213ENST00000595897 HDLBPQ00341 1268 aaKnown RBP19.1■□□□□ 0.65
ARHGEF1-213ENST00000595897 ASIC2Q16515 512 aa19.1■□□□□ 0.65
ARHGEF1-213ENST00000595897 GEMIN8Q9NWZ8 242 aaKnown RBP19.1■□□□□ 0.65
ARHGEF1-213ENST00000595897 ODF2Q5BJF6 829 aa19.09■□□□□ 0.65
ARHGEF1-213ENST00000595897 MYCBPQ99417 103 aaPredicted RBP19.09■□□□□ 0.65
ARHGEF1-213ENST00000595897 BCCIPQ9P287 314 aaKnown RBP eCLIP19.09■□□□□ 0.65
ARHGEF1-213ENST00000595897 CEP104O60308 925 aa19.09■□□□□ 0.65
ARHGEF1-213ENST00000595897 CDK8P49336 464 aa19.09■□□□□ 0.65
ARHGEF1-213ENST00000595897 ADCY7P51828 1080 aa19.09■□□□□ 0.65
ARHGEF1-213ENST00000595897 ITGB3BPQ13352 177 aaPredicted RBP19.09■□□□□ 0.65
ARHGEF1-213ENST00000595897 PDIA5Q14554 519 aa19.09■□□□□ 0.65
ARHGEF1-213ENST00000595897 ARFGAP2Q8N6H7 521 aa19.09■□□□□ 0.65
ARHGEF1-213ENST00000595897 WDR66Q8TBY9 1149 aa19.09■□□□□ 0.65
ARHGEF1-213ENST00000595897 ANKIB1Q9P2G1 1089 aa19.09■□□□□ 0.65
ARHGEF1-213ENST00000595897 FRMPD2Q68DX3 1309 aaPredicted RBP19.09■□□□□ 0.65
ARHGEF1-213ENST00000595897 CLSTN1O94985 981 aa19.08■□□□□ 0.65
ARHGEF1-213ENST00000595897 FSBPO95073 299 aa19.08■□□□□ 0.65
ARHGEF1-213ENST00000595897 GSTO1P78417 241 aa19.08■□□□□ 0.65
ARHGEF1-213ENST00000595897 GOLPH3Q9H4A6 298 aa19.08■□□□□ 0.65
ARHGEF1-213ENST00000595897 ROBO3Q96MS0 1386 aa19.08■□□□□ 0.65
ARHGEF1-213ENST00000595897 USP17L5A8MUK1 530 aa19.08■□□□□ 0.64
ARHGEF1-213ENST00000595897 CTNNA1P35221 906 aaKnown RBP19.08■□□□□ 0.64
ARHGEF1-213ENST00000595897 HSPA9P38646 679 aaKnown RBP19.08■□□□□ 0.64
ARHGEF1-213ENST00000595897 SMIM5Q71RC9 77 aa19.08■□□□□ 0.64
ARHGEF1-213ENST00000595897 OR2W6PQ8NHA6 318 aa19.08■□□□□ 0.64
ARHGEF1-213ENST00000595897 CEP95Q96GE4 821 aa19.08■□□□□ 0.64
ARHGEF1-213ENST00000595897 ZHX3Q9H4I2 956 aa19.08■□□□□ 0.64
ARHGEF1-213ENST00000595897 PHLPP1O60346 1717 aa19.08■□□□□ 0.64
ARHGEF1-213ENST00000595897 LAMB1P07942 1786 aa19.08■□□□□ 0.64
ARHGEF1-213ENST00000595897 FAM107AO95990 144 aa19.08■□□□□ 0.64
ARHGEF1-213ENST00000595897 ZCWPW2Q504Y3 356 aa19.08■□□□□ 0.64
ARHGEF1-213ENST00000595897 TBC1D9BQ66K14 1250 aa19.08■□□□□ 0.64
ARHGEF1-213ENST00000595897 NBPF5PQ86XG9 351 aaPredicted RBP19.08■□□□□ 0.64
ARHGEF1-213ENST00000595897 GJA10Q969M2 543 aa19.08■□□□□ 0.64
ARHGEF1-213ENST00000595897 SCN7AQ01118 1682 aa19.07■□□□□ 0.64
ARHGEF1-213ENST00000595897 TMCO5BA8MYB1 307 aa19.07■□□□□ 0.64
ARHGEF1-213ENST00000595897 GNA14O95837 355 aa19.07■□□□□ 0.64
ARHGEF1-213ENST00000595897 HSD17B3P37058 310 aa19.07■□□□□ 0.64
ARHGEF1-213ENST00000595897 FNTAP49354 379 aa19.07■□□□□ 0.64
ARHGEF1-213ENST00000595897 ERVK-9P63128 1117 aa19.07■□□□□ 0.64
ARHGEF1-213ENST00000595897 CEP63Q96MT8 703 aa19.07■□□□□ 0.64
ARHGEF1-213ENST00000595897 SPAG5Q96R06 1193 aa19.07■□□□□ 0.64
ARHGEF1-213ENST00000595897 UIMC1Q96RL1 719 aa19.07■□□□□ 0.64
ARHGEF1-213ENST00000595897 AP1M1Q9BXS5 423 aa19.07■□□□□ 0.64
ARHGEF1-213ENST00000595897 ISCUQ9H1K1 167 aa19.07■□□□□ 0.64
ARHGEF1-213ENST00000595897 KIAA1551Q9HCM1 1747 aa19.07■□□□□ 0.64
ARHGEF1-213ENST00000595897 ESYT2A0FGR8 921 aa19.07■□□□□ 0.64
ARHGEF1-213ENST00000595897 CACNB1Q02641 598 aaPredicted RBP19.07■□□□□ 0.64
ARHGEF1-213ENST00000595897 HERC4Q5GLZ8 1057 aaPredicted RBP19.07■□□□□ 0.64
ARHGEF1-213ENST00000595897 EMC10Q5UCC4 262 aa19.07■□□□□ 0.64
ARHGEF1-213ENST00000595897 YTHDF3Q7Z739 585 aaKnown RBP19.07■□□□□ 0.64
ARHGEF1-213ENST00000595897 DDX42Q86XP3 938 aaKnown RBP eCLIP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms