RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 METTL7BQ6UX53 244 aa11.29□□□□□ -0.6
TPM4-216ENST00000592822 CYFIP1Q7L576 1253 aa11.29□□□□□ -0.6
TPM4-216ENST00000592822 NECAB2Q7Z6G3 386 aa11.29□□□□□ -0.6
TPM4-216ENST00000592822 NOSTRINQ8IVI9 506 aa11.29□□□□□ -0.6
TPM4-216ENST00000592822 PCSK9Q8NBP7 692 aaKnown RBP11.29□□□□□ -0.6
TPM4-216ENST00000592822 GIMAP8Q8ND71 665 aaPredicted RBP11.29□□□□□ -0.6
TPM4-216ENST00000592822 PPTC7Q8NI37 304 aa11.29□□□□□ -0.6
TPM4-216ENST00000592822 FERMT2Q96AC1 680 aa11.29□□□□□ -0.6
TPM4-216ENST00000592822 SPATA33Q96N06 139 aa11.29□□□□□ -0.6
TPM4-216ENST00000592822 C11orf49Q9H6J7 331 aa11.29□□□□□ -0.6
TPM4-216ENST00000592822 MLXIPQ9HAP2 919 aa11.29□□□□□ -0.6
TPM4-216ENST00000592822 A0A1W2PQ45 241 aaPredicted RBP11.28□□□□□ -0.6
TPM4-216ENST00000592822 A0A1W2PQY0 241 aa11.28□□□□□ -0.6
TPM4-216ENST00000592822 MOXD2PA6NHM9 499 aa11.28□□□□□ -0.6
TPM4-216ENST00000592822 IPO5O00410 1097 aaKnown RBP11.28□□□□□ -0.6
TPM4-216ENST00000592822 MSH4O15457 936 aa11.28□□□□□ -0.6
TPM4-216ENST00000592822 DHX15O43143 795 aaKnown RBP11.28□□□□□ -0.6
TPM4-216ENST00000592822 SLC37A4O43826 429 aa11.28□□□□□ -0.6
TPM4-216ENST00000592822 CCNT1O60563 726 aaKnown RBP11.28□□□□□ -0.6
TPM4-216ENST00000592822 HSP90AA1P07900 732 aaKnown RBP11.28□□□□□ -0.6
TPM4-216ENST00000592822 MMP3P08254 477 aa11.28□□□□□ -0.6
TPM4-216ENST00000592822 HOXD8P13378 290 aaPredicted RBP11.28□□□□□ -0.6
TPM4-216ENST00000592822 GCFC2P16383 781 aaKnown RBP11.28□□□□□ -0.6
TPM4-216ENST00000592822 PDCP20941 246 aa11.28□□□□□ -0.6
TPM4-216ENST00000592822 GNL2Q13823 731 aaKnown RBP11.28□□□□□ -0.6
TPM4-216ENST00000592822 MCTP1Q6DN14 999 aa11.28□□□□□ -0.6
TPM4-216ENST00000592822 CXCL17Q6UXB2 119 aa11.28□□□□□ -0.6
TPM4-216ENST00000592822 SPRYD3Q8NCJ5 442 aa11.28□□□□□ -0.6
TPM4-216ENST00000592822 GPR20Q99678 358 aa11.28□□□□□ -0.6
TPM4-216ENST00000592822 ZNF577Q9BSK1 485 aa11.28□□□□□ -0.6
TPM4-216ENST00000592822 SENP6Q9GZR1 1112 aaPredicted RBP11.28□□□□□ -0.6
TPM4-216ENST00000592822 DDX25Q9UHL0 483 aaKnown RBP11.28□□□□□ -0.6
TPM4-216ENST00000592822 NFASCO94856 1347 aa11.28□□□□□ -0.6
TPM4-216ENST00000592822 TNRC18O15417 2968 aaPredicted RBP11.28□□□□□ -0.6
TPM4-216ENST00000592822 ALPK3Q96L96 1907 aa11.27□□□□□ -0.6
TPM4-216ENST00000592822 VPS37CA5D8V6 355 aaPredicted RBP11.27□□□□□ -0.61
TPM4-216ENST00000592822 ZEB2O60315 1214 aa11.27□□□□□ -0.61
TPM4-216ENST00000592822 KPNA6O60684 536 aa11.27□□□□□ -0.61
TPM4-216ENST00000592822 PPFIA4O75335 1185 aa11.27□□□□□ -0.61
TPM4-216ENST00000592822 CCNE2O96020 404 aa11.27□□□□□ -0.61
TPM4-216ENST00000592822 MYL3P08590 195 aa11.27□□□□□ -0.61
TPM4-216ENST00000592822 TOB1P50616 345 aaPredicted RBP11.27□□□□□ -0.61
TPM4-216ENST00000592822 PURAQ00577 322 aaKnown RBP11.27□□□□□ -0.61
TPM4-216ENST00000592822 SP4Q02446 784 aa11.27□□□□□ -0.61
TPM4-216ENST00000592822 BRDTQ58F21 947 aaPredicted RBP11.27□□□□□ -0.61
TPM4-216ENST00000592822 ETNPPLQ8TBG4 499 aa11.27□□□□□ -0.61
TPM4-216ENST00000592822 SLC5A5Q92911 643 aa11.27□□□□□ -0.61
TPM4-216ENST00000592822 GJA10Q969M2 543 aa11.27□□□□□ -0.61
TPM4-216ENST00000592822 NAP1L4Q99733 375 aaKnown RBP11.27□□□□□ -0.61
TPM4-216ENST00000592822 SDF4Q9BRK5 362 aa11.27□□□□□ -0.61
TPM4-216ENST00000592822 JPH1Q9HDC5 661 aaPredicted RBP11.27□□□□□ -0.61
TPM4-216ENST00000592822 KCNMB3Q9NPA1 279 aa11.27□□□□□ -0.61
TPM4-216ENST00000592822 POLR3EQ9NVU0 708 aa11.27□□□□□ -0.61
TPM4-216ENST00000592822 SLC9A2Q9UBY0 812 aa11.27□□□□□ -0.61
TPM4-216ENST00000592822 SCN10AQ9Y5Y9 1956 aa11.27□□□□□ -0.61
TPM4-216ENST00000592822 GSTTP1A0A1W2PQM5 241 aa11.26□□□□□ -0.61
TPM4-216ENST00000592822 DDX39AO00148 427 aaKnown RBP11.26□□□□□ -0.61
TPM4-216ENST00000592822 NOP56O00567 594 aaKnown RBP11.26□□□□□ -0.61
TPM4-216ENST00000592822 ATP2B1P20020 1258 aa11.26□□□□□ -0.61
TPM4-216ENST00000592822 ACTR2P61160 394 aa11.26□□□□□ -0.61
TPM4-216ENST00000592822 PSMC6P62333 389 aa11.26□□□□□ -0.61
TPM4-216ENST00000592822 BECN1Q14457 450 aa11.26□□□□□ -0.61
TPM4-216ENST00000592822 DGKDQ16760 1214 aa11.26□□□□□ -0.61
TPM4-216ENST00000592822 FERMT3Q86UX7 667 aa11.26□□□□□ -0.61
TPM4-216ENST00000592822 POTEDQ86YR6 584 aa11.26□□□□□ -0.61
TPM4-216ENST00000592822 KAT2BQ92831 832 aa11.26□□□□□ -0.61
TPM4-216ENST00000592822 RIT2Q99578 217 aa11.26□□□□□ -0.61
TPM4-216ENST00000592822 MTG1Q9BT17 334 aaPredicted RBP11.26□□□□□ -0.61
TPM4-216ENST00000592822 TBC1D22BQ9NU19 505 aa11.26□□□□□ -0.61
TPM4-216ENST00000592822 MTMR6Q9Y217 621 aa11.26□□□□□ -0.61
TPM4-216ENST00000592822 GRIN2DO15399 1336 aa11.26□□□□□ -0.61
TPM4-216ENST00000592822 WDR81Q562E7 1941 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 STX6O43752 255 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 PSMD10O75832 226 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 CABYRO75952 493 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 ZNF286BP0CG31 522 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 MCM7P33993 719 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 TCF7P36402 384 aaPredicted RBP11.25□□□□□ -0.61
TPM4-216ENST00000592822 TRAPPC10P48553 1259 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 ATN1P54259 1190 aaPredicted RBP11.25□□□□□ -0.61
TPM4-216ENST00000592822 NBR1Q14596 966 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 ZNF174Q15697 407 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 LRRC26Q2I0M4 334 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 TTC38Q5R3I4 469 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 LRCH2Q5VUJ6 765 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 SLC39A5Q6ZMH5 540 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 SEPT1Q8WYJ6 367 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 HAS1Q92839 578 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 FAM20AQ96MK3 541 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 GLT1D1Q96MS3 346 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 C16orf70Q9BSU1 422 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 TMEM60Q9H2L4 133 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 STARD7Q9NQZ5 370 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 NOL7Q9UMY1 257 aaKnown RBP11.25□□□□□ -0.61
TPM4-216ENST00000592822 ELP1O95163 1332 aa11.25□□□□□ -0.61
TPM4-216ENST00000592822 TBX3O15119 743 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 NEMFO60524 1076 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 GAS7O60861 476 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 ATG7O95352 703 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 F2P00734 622 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms