RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 MAP3K10Q02779 954 aa21.88■■□□□ 1.09
MBD3-209ENST00000592012 NBPF9Q3BBW0 867 aa21.88■■□□□ 1.09
MBD3-209ENST00000592012 HERC4Q5GLZ8 1057 aaPredicted RBP21.88■■□□□ 1.09
MBD3-209ENST00000592012 ZNF569Q5MCW4 686 aa21.88■■□□□ 1.09
MBD3-209ENST00000592012 FBXO38Q6PIJ6 1188 aa21.88■■□□□ 1.09
MBD3-209ENST00000592012 PCMTD1Q96MG8 357 aaPredicted RBP21.88■■□□□ 1.09
MBD3-209ENST00000592012 IGLV3-22A0A075B6J6 115 aa21.88■■□□□ 1.09
MBD3-209ENST00000592012 EFCAB8A8MWE9 144 aa21.88■■□□□ 1.09
MBD3-209ENST00000592012 PLA2G6O60733 806 aa21.88■■□□□ 1.09
MBD3-209ENST00000592012 CFBP00751 764 aa21.88■■□□□ 1.09
MBD3-209ENST00000592012 ZNF76P36508 570 aa21.88■■□□□ 1.09
MBD3-209ENST00000592012 FKBP3Q00688 224 aaKnown RBP21.88■■□□□ 1.09
MBD3-209ENST00000592012 SF3B2Q13435 895 aaKnown RBP21.88■■□□□ 1.09
MBD3-209ENST00000592012 CCDC174Q6PII3 467 aa21.88■■□□□ 1.09
MBD3-209ENST00000592012 DNM3Q9UQ16 869 aa21.88■■□□□ 1.09
MBD3-209ENST00000592012 SIK3Q9Y2K2 1263 aa21.88■■□□□ 1.09
MBD3-209ENST00000592012 STK24Q9Y6E0 443 aa21.88■■□□□ 1.09
MBD3-209ENST00000592012 RAD51AP2Q09MP3 1159 aa21.87■■□□□ 1.09
MBD3-209ENST00000592012 ZYXQ15942 572 aaKnown RBP21.87■■□□□ 1.09
MBD3-209ENST00000592012 KIF4BQ2VIQ3 1234 aa21.87■■□□□ 1.09
MBD3-209ENST00000592012 UBXN4Q92575 508 aa21.87■■□□□ 1.09
MBD3-209ENST00000592012 SYT2Q8N9I0 419 aaPredicted RBP21.87■■□□□ 1.09
MBD3-209ENST00000592012 IQCDQ96DY2 449 aa21.87■■□□□ 1.09
MBD3-209ENST00000592012 GLIS2Q9BZE0 524 aaPredicted RBP21.87■■□□□ 1.09
MBD3-209ENST00000592012 GCOM1H8Y6P7 765 aaPredicted RBP21.86■■□□□ 1.09
MBD3-209ENST00000592012 MEIS1O00470 390 aa21.86■■□□□ 1.09
MBD3-209ENST00000592012 POLR2MP0CAP2 368 aa21.86■■□□□ 1.09
MBD3-209ENST00000592012 SCFD1Q8WVM8 642 aa21.86■■□□□ 1.09
MBD3-209ENST00000592012 PIM2Q9P1W9 311 aa21.86■■□□□ 1.09
MBD3-209ENST00000592012 MYO1AQ9UBC5 1043 aa21.86■■□□□ 1.09
MBD3-209ENST00000592012 TRAF5O00463 557 aa21.85■■□□□ 1.09
MBD3-209ENST00000592012 CCDC84Q86UT8 332 aaPredicted RBP21.85■■□□□ 1.09
MBD3-209ENST00000592012 SH2D4AQ9H788 454 aa21.85■■□□□ 1.09
MBD3-209ENST00000592012 ZNHIT6Q9NWK9 470 aaKnown RBP21.85■■□□□ 1.09
MBD3-209ENST00000592012 H2AFXP16104 143 aaPredicted RBP21.85■■□□□ 1.09
MBD3-209ENST00000592012 PPP2R3AQ06190 1150 aa21.85■■□□□ 1.09
MBD3-209ENST00000592012 PABPC4Q13310 644 aaKnown RBP eCLIP21.85■■□□□ 1.093e-7■■■■□ 20
MBD3-209ENST00000592012 GIT2Q14161 759 aa21.85■■□□□ 1.09
MBD3-209ENST00000592012 FAM160B2Q86V87 743 aa21.85■■□□□ 1.09
MBD3-209ENST00000592012 SLC35F6Q8N357 371 aa21.85■■□□□ 1.09
MBD3-209ENST00000592012 FEZ1Q99689 392 aa21.85■■□□□ 1.09
MBD3-209ENST00000592012 KCTD10Q9H3F6 313 aa21.85■■□□□ 1.09
MBD3-209ENST00000592012 EMILIN3Q9NT22 766 aa21.85■■□□□ 1.09
MBD3-209ENST00000592012 EML1O00423 815 aa21.84■■□□□ 1.09
MBD3-209ENST00000592012 KRT18P05783 430 aaKnown RBP21.84■■□□□ 1.09
MBD3-209ENST00000592012 ASNSP08243 561 aa21.84■■□□□ 1.09
MBD3-209ENST00000592012 CDK17Q00537 523 aa21.84■■□□□ 1.09
MBD3-209ENST00000592012 POLR3CQ9BUI4 534 aaPredicted RBP21.84■■□□□ 1.09
MBD3-209ENST00000592012 WDR18Q9BV38 432 aa21.84■■□□□ 1.09
MBD3-209ENST00000592012 MYOZ2Q9NPC6 264 aa21.84■■□□□ 1.09
MBD3-209ENST00000592012 FBXO28Q9NVF7 368 aa21.84■■□□□ 1.09
MBD3-209ENST00000592012 COL4A3BPQ9Y5P4 624 aa21.84■■□□□ 1.09
MBD3-209ENST00000592012 SHTN1A0MZ66 631 aa21.84■■□□□ 1.09
MBD3-209ENST00000592012 NHEJ1Q9H9Q4 299 aaPredicted RBP21.84■■□□□ 1.09
MBD3-209ENST00000592012 FEM1BQ9UK73 627 aa21.84■■□□□ 1.09
MBD3-209ENST00000592012 MRPL11Q9Y3B7 192 aaKnown RBP21.84■■□□□ 1.09
MBD3-209ENST00000592012 UTRNP46939 3433 aa21.84■■□□□ 1.09
MBD3-209ENST00000592012 EPHB6O15197 1021 aa21.83■■□□□ 1.09
MBD3-209ENST00000592012 ERCC3P19447 782 aa21.83■■□□□ 1.09
MBD3-209ENST00000592012 TGFB2P61812 414 aa21.83■■□□□ 1.09
MBD3-209ENST00000592012 HERVK_113P62684 666 aa21.83■■□□□ 1.09
MBD3-209ENST00000592012 CYP4A11Q02928 519 aa21.83■■□□□ 1.09
MBD3-209ENST00000592012 CIAPIN1Q6FI81 312 aa21.83■■□□□ 1.09
MBD3-209ENST00000592012 OTOP1Q7RTM1 612 aa21.83■■□□□ 1.09
MBD3-209ENST00000592012 NELFCDQ8IXH7 590 aa21.83■■□□□ 1.09
MBD3-209ENST00000592012 CCDC170Q8IYT3 715 aa21.83■■□□□ 1.09
MBD3-209ENST00000592012 CEP63Q96MT8 703 aa21.83■■□□□ 1.09
MBD3-209ENST00000592012 EIF2AK1Q9BQI3 630 aaKnown RBP21.83■■□□□ 1.09
MBD3-209ENST00000592012 PLAGL2Q9UPG8 496 aa21.83■■□□□ 1.09
MBD3-209ENST00000592012 CTAGE9A4FU28 777 aa21.83■■□□□ 1.08
MBD3-209ENST00000592012 KIF20AO95235 890 aa21.83■■□□□ 1.08
MBD3-209ENST00000592012 HNRNPH3P31942 346 aaKnown RBP21.83■■□□□ 1.08
MBD3-209ENST00000592012 HAUS4Q9H6D7 363 aa21.83■■□□□ 1.08
MBD3-209ENST00000592012 FAM207AQ9NSI2 230 aaPredicted RBP21.83■■□□□ 1.08
MBD3-209ENST00000592012 PHF20L1A8MW92 1017 aa21.82■■□□□ 1.08
MBD3-209ENST00000592012 HSD17B14Q9BPX1 270 aa21.82■■□□□ 1.08
MBD3-209ENST00000592012 REEP2Q9BRK0 252 aa21.82■■□□□ 1.08
MBD3-209ENST00000592012 ZHX3Q9H4I2 956 aa21.82■■□□□ 1.08
MBD3-209ENST00000592012 RGL1Q9NZL6 768 aa21.82■■□□□ 1.08
MBD3-209ENST00000592012 SCAF8Q9UPN6 1271 aaKnown RBP21.82■■□□□ 1.08
MBD3-209ENST00000592012 CYLC1P35663 651 aaPredicted RBP21.82■■□□□ 1.08
MBD3-209ENST00000592012 KRT83P78385 493 aa21.82■■□□□ 1.08
MBD3-209ENST00000592012 ZNF662Q6ZS27 426 aa21.82■■□□□ 1.08
MBD3-209ENST00000592012 RSRC2Q7L4I2 434 aaKnown RBP21.82■■□□□ 1.08
MBD3-209ENST00000592012 LDHDQ86WU2 507 aa21.82■■□□□ 1.08
MBD3-209ENST00000592012 MMRN2Q9H8L6 949 aa21.82■■□□□ 1.08
MBD3-209ENST00000592012 TRIM10Q9UDY6 481 aa21.82■■□□□ 1.08
MBD3-209ENST00000592012 CDC23Q9UJX2 597 aa21.82■■□□□ 1.08
MBD3-209ENST00000592012 PSMD10O75832 226 aa21.81■■□□□ 1.08
MBD3-209ENST00000592012 PTGER2P43116 358 aa21.81■■□□□ 1.08
MBD3-209ENST00000592012 CASP5P51878 434 aa21.81■■□□□ 1.08
MBD3-209ENST00000592012 RASA3Q14644 834 aa21.81■■□□□ 1.08
MBD3-209ENST00000592012 SAMD1Q6SPF0 538 aaPredicted RBP21.81■■□□□ 1.08
MBD3-209ENST00000592012 ZC3H3Q8IXZ2 948 aaKnown RBP21.81■■□□□ 1.08
MBD3-209ENST00000592012 KCTD17Q8N5Z5 321 aa21.81■■□□□ 1.08
MBD3-209ENST00000592012 GUCA1BQ9UMX6 200 aa21.81■■□□□ 1.08
MBD3-209ENST00000592012 SPDYE4A6NLX3 237 aa21.81■■□□□ 1.08
MBD3-209ENST00000592012 EIF3CLB5ME19 914 aaKnown RBP21.81■■□□□ 1.08
MBD3-209ENST00000592012 GNA14O95837 355 aa21.81■■□□□ 1.08
MBD3-209ENST00000592012 MARSP56192 900 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms