RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 IPO8O15397 1037 aaKnown RBP9.25□□□□□ -0.93
VMP1-213ENST00000591877 FRAT2O75474 233 aaPredicted RBP9.25□□□□□ -0.93
VMP1-213ENST00000591877 GNAI3P08754 354 aa9.25□□□□□ -0.93
VMP1-213ENST00000591877 TFE3P19532 575 aaPredicted RBP9.25□□□□□ -0.93
VMP1-213ENST00000591877 ADORA1P30542 326 aa9.25□□□□□ -0.93
VMP1-213ENST00000591877 IL15P40933 162 aaPredicted RBP9.25□□□□□ -0.93
VMP1-213ENST00000591877 APOBEC3HQ6NTF7 200 aaKnown RBP9.25□□□□□ -0.93
VMP1-213ENST00000591877 GOLM1Q8NBJ4 401 aa9.25□□□□□ -0.93
VMP1-213ENST00000591877 HHIPQ96QV1 700 aa9.25□□□□□ -0.93
VMP1-213ENST00000591877 MRIQ9BWK5 157 aa9.25□□□□□ -0.93
VMP1-213ENST00000591877 MCOLN1Q9GZU1 580 aa9.25□□□□□ -0.93
VMP1-213ENST00000591877 RASSF4Q9H2L5 321 aa9.25□□□□□ -0.93
VMP1-213ENST00000591877 SIRPGQ9P1W8 387 aa9.25□□□□□ -0.93
VMP1-213ENST00000591877 PNMA6EA0A0J9YXQ4 647 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 TCP10L2B9ZVM9 353 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 SRGAP3O43295 1099 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 PHKA1P46020 1223 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 CACNB3P54284 484 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 TIMM10P62072 90 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 FAM160A1Q05DH4 1040 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 FAAP100Q0VG06 881 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 SUPT20HL1Q3ZLR7 823 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 ZKSCAN2Q63HK3 967 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 TMEM57Q8N5G2 664 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 ASAP3Q8TDY4 903 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 NKD1Q969G9 470 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 TEKT1Q969V4 418 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 ZDHHC15Q96MV8 337 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 TMEM39BQ9GZU3 492 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 UBP1Q9NZI7 540 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 GPN3Q9UHW5 284 aaPredicted RBP9.24□□□□□ -0.93
VMP1-213ENST00000591877 CYP8B1Q9UNU6 501 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 HDAC5Q9UQL6 1122 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 SUGT1Q9Y2Z0 365 aa9.24□□□□□ -0.93
VMP1-213ENST00000591877 KIAA1324LA8MWY0 1029 aaPredicted RBP9.23□□□□□ -0.93
VMP1-213ENST00000591877 TBC1D8O95759 1140 aa9.23□□□□□ -0.93
VMP1-213ENST00000591877 B3GALT4O96024 378 aa9.23□□□□□ -0.93
VMP1-213ENST00000591877 PRDX5P30044 214 aa9.23□□□□□ -0.93
VMP1-213ENST00000591877 ATP11AP98196 1134 aa9.23□□□□□ -0.93
VMP1-213ENST00000591877 TFCP2Q12800 502 aa9.23□□□□□ -0.93
VMP1-213ENST00000591877 TNFAIP1Q13829 316 aa9.23□□□□□ -0.93
VMP1-213ENST00000591877 SDE2Q6IQ49 451 aa9.23□□□□□ -0.93
VMP1-213ENST00000591877 HHIPL2Q6UWX4 724 aa9.23□□□□□ -0.93
VMP1-213ENST00000591877 WDR66Q8TBY9 1149 aa9.23□□□□□ -0.93
VMP1-213ENST00000591877 MRFAP1L1Q96HT8 127 aa9.23□□□□□ -0.93
VMP1-213ENST00000591877 WNK4Q96J92 1243 aa9.23□□□□□ -0.93
VMP1-213ENST00000591877 MIR1-1HGQ9H1L0 117 aa9.23□□□□□ -0.93
VMP1-213ENST00000591877 R3HDMLQ9H3Y0 253 aa9.23□□□□□ -0.93
VMP1-213ENST00000591877 ZBED9Q6R2W3 1325 aa9.23□□□□□ -0.93
VMP1-213ENST00000591877 AK9Q5TCS8 1911 aa9.23□□□□□ -0.93
VMP1-213ENST00000591877 MYO5AQ9Y4I1 1855 aaKnown RBP9.22□□□□□ -0.93
VMP1-213ENST00000591877 A0A1B0GUL7 405 aa9.22□□□□□ -0.93
VMP1-213ENST00000591877 F8W735 103 aaPredicted RBP9.22□□□□□ -0.93
VMP1-213ENST00000591877 KLF4O43474 513 aa9.22□□□□□ -0.93
VMP1-213ENST00000591877 ADAMTS4O75173 837 aa9.22□□□□□ -0.93
VMP1-213ENST00000591877 GNAI2P04899 355 aa9.22□□□□□ -0.93
VMP1-213ENST00000591877 NME2P22392 152 aa9.22□□□□□ -0.93
VMP1-213ENST00000591877 BMS1Q14692 1282 aaKnown RBP9.22□□□□□ -0.93
VMP1-213ENST00000591877 LRRC14Q15048 493 aa9.22□□□□□ -0.93
VMP1-213ENST00000591877 TNNI3KQ59H18 835 aa9.22□□□□□ -0.93
VMP1-213ENST00000591877 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.22□□□□□ -0.93
VMP1-213ENST00000591877 GATAD2BQ8WXI9 593 aa9.22□□□□□ -0.93
VMP1-213ENST00000591877 POP1Q99575 1024 aaKnown RBP9.22□□□□□ -0.93
VMP1-213ENST00000591877 SRRTQ9BXP5 876 aaKnown RBP9.22□□□□□ -0.93
VMP1-213ENST00000591877 SMG9Q9H0W8 520 aaKnown RBP9.22□□□□□ -0.93
VMP1-213ENST00000591877 MUC3BQ9H195 1237 aa9.22□□□□□ -0.93
VMP1-213ENST00000591877 PRKAG3Q9UGI9 489 aa9.22□□□□□ -0.93
VMP1-213ENST00000591877 DAGLAQ9Y4D2 1042 aa9.22□□□□□ -0.93
VMP1-213ENST00000591877 MAST3O60307 1309 aa9.22□□□□□ -0.93
VMP1-213ENST00000591877 SALL1Q9NSC2 1324 aa9.22□□□□□ -0.93
VMP1-213ENST00000591877 IGF2BP3O00425 579 aaKnown RBP eCLIP9.21□□□□□ -0.94
VMP1-213ENST00000591877 EIF4EBP3O60516 100 aaPredicted RBP9.21□□□□□ -0.94
VMP1-213ENST00000591877 PAGE1O75459 146 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 IGLV1-40P01703 118 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 ZBTB48P10074 688 aaPredicted RBP9.21□□□□□ -0.94
VMP1-213ENST00000591877 PTPRAP18433 802 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 EIF2AK2P19525 551 aaKnown RBP9.21□□□□□ -0.94
VMP1-213ENST00000591877 SREBF2Q12772 1141 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 RASGRF1Q13972 1273 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 RAB33AQ14088 237 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 MPP2Q14168 576 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 FKBP1CQ5VVH2 108 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 HFE2Q6ZVN8 426 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 ANKS3Q6ZW76 656 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 FAM83AQ86UY5 434 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 ANKRD13AQ8IZ07 590 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 CACTIN-AS1Q8N1I8 211 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.21□□□□□ -0.94
VMP1-213ENST00000591877 CPLX3Q8WVH0 158 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 ADAM19Q9H013 955 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 MRPL18Q9H0U6 180 aaKnown RBP9.21□□□□□ -0.94
VMP1-213ENST00000591877 GNL3LQ9NVN8 582 aaKnown RBP9.21□□□□□ -0.94
VMP1-213ENST00000591877 DENND2AQ9ULE3 1009 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 SOX13Q9UN79 622 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 RAXQ9Y2V3 346 aa9.21□□□□□ -0.94
VMP1-213ENST00000591877 DOCK2Q92608 1830 aa9.2□□□□□ -0.94
VMP1-213ENST00000591877 FAM221AA4D161 298 aa9.2□□□□□ -0.94
VMP1-213ENST00000591877 ANKRD62A6NC57 917 aa9.2□□□□□ -0.94
VMP1-213ENST00000591877 MANSC4A6NHS7 340 aaPredicted RBP9.2□□□□□ -0.94
VMP1-213ENST00000591877 J3QW42 95 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms