RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 TMEM151AQ8N4L1 468 aa9.7□□□□□ -0.86
VMP1-208ENST00000588617 USHBP1Q8N6Y0 703 aa9.7□□□□□ -0.86
VMP1-208ENST00000588617 KIAA1958Q8N8K9 716 aa9.7□□□□□ -0.86
VMP1-208ENST00000588617 LINC00116Q8NCU8 138 aa9.7□□□□□ -0.86
VMP1-208ENST00000588617 LMBR1Q8WVP7 490 aa9.7□□□□□ -0.86
VMP1-208ENST00000588617 MYRFLQ96LU7 910 aa9.7□□□□□ -0.86
VMP1-208ENST00000588617 JAM3Q9BX67 310 aa9.7□□□□□ -0.86
VMP1-208ENST00000588617 DUSP15Q9H1R2 295 aaPredicted RBP9.7□□□□□ -0.86
VMP1-208ENST00000588617 TRIT1Q9H3H1 467 aaKnown RBP9.7□□□□□ -0.86
VMP1-208ENST00000588617 NMRK2Q9NPI5 230 aa9.7□□□□□ -0.86
VMP1-208ENST00000588617 FBXL7Q9UJT9 491 aa9.7□□□□□ -0.86
VMP1-208ENST00000588617 TCFL5Q9UL49 500 aa9.7□□□□□ -0.86
VMP1-208ENST00000588617 FAM155AB1AL88 458 aaPredicted RBP9.69□□□□□ -0.86
VMP1-208ENST00000588617 FGF10O15520 208 aaPredicted RBP9.69□□□□□ -0.86
VMP1-208ENST00000588617 GDF11O95390 407 aa9.69□□□□□ -0.86
VMP1-208ENST00000588617 ZBTB48P10074 688 aaPredicted RBP9.69□□□□□ -0.86
VMP1-208ENST00000588617 NOS3P29474 1203 aa9.69□□□□□ -0.86
VMP1-208ENST00000588617 GTF2A2P52657 109 aa9.69□□□□□ -0.86
VMP1-208ENST00000588617 PHC1P78364 1004 aa9.69□□□□□ -0.86
VMP1-208ENST00000588617 SMAD3P84022 425 aaKnown RBP9.69□□□□□ -0.86
VMP1-208ENST00000588617 SMAD2Q15796 467 aaKnown RBP9.69□□□□□ -0.86
VMP1-208ENST00000588617 UVSSAQ2YD98 709 aa9.69□□□□□ -0.86
VMP1-208ENST00000588617 MORC1Q86VD1 984 aa9.69□□□□□ -0.86
VMP1-208ENST00000588617 FAM20CQ8IXL6 584 aa9.69□□□□□ -0.86
VMP1-208ENST00000588617 ZNF610Q8N9Z0 462 aa9.69□□□□□ -0.86
VMP1-208ENST00000588617 WFDC12Q8WWY7 111 aa9.69□□□□□ -0.86
VMP1-208ENST00000588617 TEKT5Q96M29 485 aa9.69□□□□□ -0.86
VMP1-208ENST00000588617 STRBPQ96SI9 672 aaKnown RBP9.69□□□□□ -0.86
VMP1-208ENST00000588617 ELF4Q99607 663 aaPredicted RBP9.69□□□□□ -0.86
VMP1-208ENST00000588617 CDADC1Q9BWV3 514 aa9.69□□□□□ -0.86
VMP1-208ENST00000588617 FOXP3Q9BZS1 431 aa9.69□□□□□ -0.86
VMP1-208ENST00000588617 MS4A5Q9H3V2 200 aa9.69□□□□□ -0.86
VMP1-208ENST00000588617 MKL2Q9ULH7 1088 aa9.69□□□□□ -0.86
VMP1-208ENST00000588617 ZNF561-AS1K7EIQ3 104 aa9.68□□□□□ -0.86
VMP1-208ENST00000588617 IGF2BP3O00425 579 aaKnown RBP eCLIP9.68□□□□□ -0.86
VMP1-208ENST00000588617 KCNK3O14649 394 aa9.68□□□□□ -0.86
VMP1-208ENST00000588617 AP1G1O43747 822 aa9.68□□□□□ -0.86
VMP1-208ENST00000588617 FKTNO75072 461 aa9.68□□□□□ -0.86
VMP1-208ENST00000588617 GRAMD1BQ3KR37 738 aa9.68□□□□□ -0.86
VMP1-208ENST00000588617 RRP12Q5JTH9 1297 aaKnown RBP9.68□□□□□ -0.86
VMP1-208ENST00000588617 PODNQ7Z5L7 613 aa9.68□□□□□ -0.86
VMP1-208ENST00000588617 RUNDC1Q96C34 613 aa9.68□□□□□ -0.86
VMP1-208ENST00000588617 ELAC2Q9BQ52 826 aaKnown RBP9.68□□□□□ -0.86
VMP1-208ENST00000588617 SLC12A5Q9H2X9 1139 aa9.68□□□□□ -0.86
VMP1-208ENST00000588617 PCIF1Q9H4Z3 704 aa9.68□□□□□ -0.86
VMP1-208ENST00000588617 PPCSQ9HAB8 311 aa9.68□□□□□ -0.86
VMP1-208ENST00000588617 SMURF1Q9HCE7 757 aa9.68□□□□□ -0.86
VMP1-208ENST00000588617 C1orf112Q9NSG2 853 aa9.68□□□□□ -0.86
VMP1-208ENST00000588617 BTG4Q9NY30 223 aa9.68□□□□□ -0.86
VMP1-208ENST00000588617 DVL2O14641 736 aa9.67□□□□□ -0.86
VMP1-208ENST00000588617 CTNND1O60716 968 aaKnown RBP9.67□□□□□ -0.86
VMP1-208ENST00000588617 ZRANB2O95218 330 aaKnown RBP eCLIP9.67□□□□□ -0.86
VMP1-208ENST00000588617 TBC1D8O95759 1140 aa9.67□□□□□ -0.86
VMP1-208ENST00000588617 GNAT1P11488 350 aa9.67□□□□□ -0.86
VMP1-208ENST00000588617 GPR19Q15760 415 aa9.67□□□□□ -0.86
VMP1-208ENST00000588617 ARHGAP36Q6ZRI8 547 aa9.67□□□□□ -0.86
VMP1-208ENST00000588617 TTLL7Q6ZT98 887 aa9.67□□□□□ -0.86
VMP1-208ENST00000588617 TSPYL5Q86VY4 417 aaPredicted RBP9.67□□□□□ -0.86
VMP1-208ENST00000588617 NAT16Q8N8M0 369 aa9.67□□□□□ -0.86
VMP1-208ENST00000588617 SLC35G2Q8TBE7 412 aa9.67□□□□□ -0.86
VMP1-208ENST00000588617 TGFBRAP1Q8WUH2 860 aa9.67□□□□□ -0.86
VMP1-208ENST00000588617 SCARF2Q96GP6 870 aaPredicted RBP9.67□□□□□ -0.86
VMP1-208ENST00000588617 ZDHHC5Q9C0B5 715 aa9.67□□□□□ -0.86
VMP1-208ENST00000588617 CDIP1Q9H305 208 aa9.67□□□□□ -0.86
VMP1-208ENST00000588617 NOP53Q9NZM5 478 aaKnown RBP9.67□□□□□ -0.86
VMP1-208ENST00000588617 PUF60Q9UHX1 559 aaKnown RBP9.67□□□□□ -0.86
VMP1-208ENST00000588617 C7orf72A4D263 438 aa9.66□□□□□ -0.86
VMP1-208ENST00000588617 AMY2AP04746 511 aa9.66□□□□□ -0.86
VMP1-208ENST00000588617 AMY2BP19961 511 aa9.66□□□□□ -0.86
VMP1-208ENST00000588617 HTR3AP46098 478 aa9.66□□□□□ -0.86
VMP1-208ENST00000588617 KIF11P52732 1056 aa9.66□□□□□ -0.86
VMP1-208ENST00000588617 NRG1Q02297 640 aaPredicted RBP9.66□□□□□ -0.86
VMP1-208ENST00000588617 GALEQ14376 348 aa9.66□□□□□ -0.86
VMP1-208ENST00000588617 CDKAL1Q5VV42 579 aa9.66□□□□□ -0.86
VMP1-208ENST00000588617 OGFOD3Q6PK18 319 aa9.66□□□□□ -0.86
VMP1-208ENST00000588617 EP400NLQ6ZTU2 488 aa9.66□□□□□ -0.86
VMP1-208ENST00000588617 BEND4Q6ZU67 534 aa9.66□□□□□ -0.86
VMP1-208ENST00000588617 ARMC10Q8N2F6 343 aa9.66□□□□□ -0.86
VMP1-208ENST00000588617 TMEM169Q96HH4 297 aa9.66□□□□□ -0.86
VMP1-208ENST00000588617 SP110Q9HB58 689 aa9.66□□□□□ -0.86
VMP1-208ENST00000588617 CCM2LQ9NUG4 571 aaPredicted RBP9.66□□□□□ -0.86
VMP1-208ENST00000588617 WTIPA6NIX2 430 aaPredicted RBP9.65□□□□□ -0.86
VMP1-208ENST00000588617 RASSF10A6NK89 507 aa9.65□□□□□ -0.86
VMP1-208ENST00000588617 WASH4PA8MWX3 477 aa9.65□□□□□ -0.86
VMP1-208ENST00000588617 C9orf172C9J069 976 aa9.65□□□□□ -0.86
VMP1-208ENST00000588617 KDM1AO60341 852 aa9.65□□□□□ -0.86
VMP1-208ENST00000588617 NPHS1O60500 1241 aa9.65□□□□□ -0.86
VMP1-208ENST00000588617 HIP1RO75146 1068 aa9.65□□□□□ -0.86
VMP1-208ENST00000588617 OFD1O75665 1012 aa9.65□□□□□ -0.86
VMP1-208ENST00000588617 COL6A2P12110 1019 aa9.65□□□□□ -0.86
VMP1-208ENST00000588617 AKAP5P24588 427 aa9.65□□□□□ -0.86
VMP1-208ENST00000588617 PDCD1Q15116 288 aa9.65□□□□□ -0.86
VMP1-208ENST00000588617 ANGEL2Q5VTE6 544 aaKnown RBP9.65□□□□□ -0.86
VMP1-208ENST00000588617 FRMD7Q6ZUT3 714 aa9.65□□□□□ -0.86
VMP1-208ENST00000588617 CEP68Q76N32 757 aa9.65□□□□□ -0.86
VMP1-208ENST00000588617 PTRH1Q86Y79 214 aaKnown RBP9.65□□□□□ -0.86
VMP1-208ENST00000588617 JADE3Q92613 823 aa9.65□□□□□ -0.86
VMP1-208ENST00000588617 PTPRHQ9HD43 1115 aa9.65□□□□□ -0.86
VMP1-208ENST00000588617 DDX21Q9NR30 783 aaKnown RBP eCLIP9.65□□□□□ -0.86
VMP1-208ENST00000588617 PCDHA11Q9Y5I1 949 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms