RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 CCT2P78371 535 aaKnown RBP12□□□□□ -0.49
TPM4-209ENST00000588483 SMAD3P84022 425 aaKnown RBP12□□□□□ -0.49
TPM4-209ENST00000588483 AKAP17AQ02040 695 aaKnown RBP12□□□□□ -0.49
TPM4-209ENST00000588483 MTMR1Q13613 665 aa12□□□□□ -0.49
TPM4-209ENST00000588483 ANKRD1Q15327 319 aa12□□□□□ -0.49
TPM4-209ENST00000588483 KIAA0753Q2KHM9 967 aa12□□□□□ -0.49
TPM4-209ENST00000588483 CEP55Q53EZ4 464 aa12□□□□□ -0.49
TPM4-209ENST00000588483 TMEM240Q5SV17 173 aa12□□□□□ -0.49
TPM4-209ENST00000588483 FAM109BQ6ICB4 259 aaPredicted RBP12□□□□□ -0.49
TPM4-209ENST00000588483 CYFIP1Q7L576 1253 aa12□□□□□ -0.49
TPM4-209ENST00000588483 NIPA1Q7RTP0 329 aa12□□□□□ -0.49
TPM4-209ENST00000588483 CAGE1Q8TC20 777 aa12□□□□□ -0.49
TPM4-209ENST00000588483 VWCEQ96DN2 955 aa12□□□□□ -0.49
TPM4-209ENST00000588483 BUD13Q9BRD0 619 aaKnown RBP eCLIP12□□□□□ -0.49
TPM4-209ENST00000588483 MXRA8Q9BRK3 442 aa12□□□□□ -0.49
TPM4-209ENST00000588483 PPP1R12CQ9BZL4 782 aa12□□□□□ -0.49
TPM4-209ENST00000588483 C6orf50Q9HD87 102 aa12□□□□□ -0.49
TPM4-209ENST00000588483 IL23AQ9NPF7 189 aa12□□□□□ -0.49
TPM4-209ENST00000588483 NFASCO94856 1347 aa12□□□□□ -0.49
TPM4-209ENST00000588483 TRIP12Q14669 1992 aaPredicted RBP11.99□□□□□ -0.49
TPM4-209ENST00000588483 H3BRB1 525 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 MEIS1O00470 390 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 NOP56O00567 594 aaKnown RBP11.99□□□□□ -0.49
TPM4-209ENST00000588483 PFKFB2O60825 505 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 ATP9AO75110 1047 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 DEXIO95424 95 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 SEC24BO95487 1268 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 CYP2C9P11712 490 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 RFC2P35250 354 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 ARHGAP4P98171 946 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 BFSP2Q13515 415 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 PTGISQ16647 500 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 FAM47CQ5HY64 1035 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 GDF6Q6KF10 455 aaPredicted RBP11.99□□□□□ -0.49
TPM4-209ENST00000588483 TRIM22Q8IYM9 498 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 REXO1Q8N1G1 1221 aaKnown RBP11.99□□□□□ -0.49
TPM4-209ENST00000588483 C7orf31Q8N865 590 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 BICD2Q8TD16 824 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 RNPC3Q96LT9 517 aaKnown RBP11.99□□□□□ -0.49
TPM4-209ENST00000588483 SLC26A6Q9BXS9 759 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 TUT1Q9H6E5 874 aaKnown RBP11.99□□□□□ -0.49
TPM4-209ENST00000588483 KCNH7Q9NS40 1196 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 HDAC6Q9UBN7 1215 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 STK36Q9NRP7 1315 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 CHD9Q3L8U1 2897 aa11.99□□□□□ -0.49
TPM4-209ENST00000588483 EMSYQ7Z589 1322 aa11.98□□□□□ -0.49
TPM4-209ENST00000588483 IGLV3-22A0A075B6J6 115 aa11.98□□□□□ -0.49
TPM4-209ENST00000588483 CPLX1O14810 134 aa11.98□□□□□ -0.49
TPM4-209ENST00000588483 PARNO95453 639 aaKnown RBP11.98□□□□□ -0.49
TPM4-209ENST00000588483 CIITAP33076 1130 aa11.98□□□□□ -0.49
TPM4-209ENST00000588483 SSRP1Q08945 709 aaKnown RBP11.98□□□□□ -0.49
TPM4-209ENST00000588483 SCRN1Q12765 414 aa11.98□□□□□ -0.49
TPM4-209ENST00000588483 PTK7Q13308 1070 aa11.98□□□□□ -0.49
TPM4-209ENST00000588483 TRIM71Q2Q1W2 868 aaKnown RBP11.98□□□□□ -0.49
TPM4-209ENST00000588483 C8orf34Q49A92 452 aa11.98□□□□□ -0.49
TPM4-209ENST00000588483 CPLX2Q6PUV4 134 aaKnown RBP11.98□□□□□ -0.49
TPM4-209ENST00000588483 CCDC155Q8N6L0 562 aa11.98□□□□□ -0.49
TPM4-209ENST00000588483 DAGLBQ8NCG7 672 aa11.98□□□□□ -0.49
TPM4-209ENST00000588483 CYP2W1Q8TAV3 490 aa11.98□□□□□ -0.49
TPM4-209ENST00000588483 AFAP1L1Q8TED9 768 aa11.98□□□□□ -0.49
TPM4-209ENST00000588483 HERVK_113Q902F9 699 aa11.98□□□□□ -0.49
TPM4-209ENST00000588483 DHX38Q92620 1227 aaKnown RBP11.98□□□□□ -0.49
TPM4-209ENST00000588483 PGBD1Q96JS3 809 aa11.98□□□□□ -0.49
TPM4-209ENST00000588483 TMEM260Q9NX78 707 aa11.98□□□□□ -0.49
TPM4-209ENST00000588483 TPCN1Q9ULQ1 816 aa11.98□□□□□ -0.49
TPM4-209ENST00000588483 SCN5AQ14524 2016 aa11.98□□□□□ -0.49
TPM4-209ENST00000588483 TMEM265A0A087WTH1 108 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 GSTTP1A0A1W2PQM5 241 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 M0R2N6 131 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 ADAMTS3O15072 1205 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 CDKL5O76039 1030 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 IQCF3P0C7M6 154 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 AK2P54819 239 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 CCL23P55773 120 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 ADAM17P78536 824 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 HIC1Q14526 733 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 NPY5RQ15761 445 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 GALNT17Q6IS24 598 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 ZNF365Q70YC5 407 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 SERINC5Q86VE9 423 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 RPUSD2Q8IZ73 545 aaKnown RBP11.97□□□□□ -0.49
TPM4-209ENST00000588483 TET1Q8NFU7 2136 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 SEPT1Q8WYJ6 367 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 AGO4Q9HCK5 861 aaKnown RBP11.97□□□□□ -0.49
TPM4-209ENST00000588483 JPH1Q9HDC5 661 aaPredicted RBP11.97□□□□□ -0.49
TPM4-209ENST00000588483 VPS54Q9P1Q0 977 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 ZNF215Q9UL58 517 aaPredicted RBP11.97□□□□□ -0.49
TPM4-209ENST00000588483 NOD1Q9Y239 953 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 TELO2Q9Y4R8 837 aa11.97□□□□□ -0.49
TPM4-209ENST00000588483 KAT6AQ92794 2004 aa11.96□□□□□ -0.49
TPM4-209ENST00000588483 CHD7Q9P2D1 2997 aa11.96□□□□□ -0.49
TPM4-209ENST00000588483 FAM86B1E9PN63 330 aa11.96□□□□□ -0.49
TPM4-209ENST00000588483 SORBS3O60504 671 aa11.96□□□□□ -0.49
TPM4-209ENST00000588483 CAND2O75155 1236 aa11.96□□□□□ -0.49
TPM4-209ENST00000588483 LGR5O75473 907 aa11.96□□□□□ -0.49
TPM4-209ENST00000588483 ATG7O95352 703 aa11.96□□□□□ -0.49
TPM4-209ENST00000588483 FAM86B2P0C5J1 330 aa11.96□□□□□ -0.49
TPM4-209ENST00000588483 SMIM10L2AP0DMW4 78 aa11.96□□□□□ -0.49
TPM4-209ENST00000588483 SMIM10L2BP0DMW5 78 aa11.96□□□□□ -0.49
TPM4-209ENST00000588483 ARP10275 920 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms