RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 RIT2Q99578 217 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 TEKT3Q9BXF9 490 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 RAB34Q9BZG1 259 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 UNC45AQ9H3U1 944 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 RNF186Q9NXI6 227 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 FOXN1O15353 648 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 CHMP2AO43633 222 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 KCNA2P16389 499 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 ICAM3P32942 547 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 GRB10Q13322 594 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 PPP2R5CQ13362 524 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 ZRSR1Q15695 479 aaKnown RBP12.72□□□□□ -0.37
VMP1-207ENST00000588131 ECM1Q16610 540 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 GNPTABQ3T906 1256 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 KRT79Q5XKE5 535 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 SEPT14Q6ZU15 432 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 ZNF467Q7Z7K2 595 aaPredicted RBP12.72□□□□□ -0.37
VMP1-207ENST00000588131 DPP9Q86TI2 863 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 MAML3Q96JK9 1138 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 MPHOSPH6Q99547 160 aaKnown RBP12.72□□□□□ -0.37
VMP1-207ENST00000588131 ARHGAP39Q9C0H5 1083 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 TNMDQ9H2S6 317 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 BCAS3Q9H6U6 928 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 DISC1Q9NRI5 854 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 MCM3APO60318 1980 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 DOCK5Q9H7D0 1870 aa12.72□□□□□ -0.37
VMP1-207ENST00000588131 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.71□□□□□ -0.37
VMP1-207ENST00000588131 LOC102724159A0A0B4J2E5 919 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 SYCE3A1L190 88 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 ASB14A6NK59 587 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 B4DLN1 442 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 TNPO2O14787 897 aaKnown RBP12.71□□□□□ -0.37
VMP1-207ENST00000588131 MAFGO15525 162 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 MED24O75448 989 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 TRPA1O75762 1119 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 PLCG1P19174 1290 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 CAP1Q01518 475 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 MAP2K5Q13163 448 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 PWP2Q15269 919 aaKnown RBP12.71□□□□□ -0.37
VMP1-207ENST00000588131 TMEM119Q4V9L6 283 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 NAALADL2Q58DX5 795 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 PDXDC2PQ6P474 469 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 ARMCX2Q7L311 632 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 FBXO16Q8IX29 292 aaPredicted RBP12.71□□□□□ -0.37
VMP1-207ENST00000588131 CNNM3Q8NE01 707 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 RASSF8Q8NHQ8 419 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 USP6NLQ92738 828 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 ERCC4Q92889 916 aaPredicted RBP12.71□□□□□ -0.37
VMP1-207ENST00000588131 CDHR1Q96JP9 859 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 CFHR5Q9BXR6 569 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 TBC1D22BQ9NU19 505 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 CCDC39Q9UFE4 941 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 GJD2Q9UKL4 321 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 DIS3Q9Y2L1 958 aaKnown RBP12.71□□□□□ -0.37
VMP1-207ENST00000588131 TELO2Q9Y4R8 837 aa12.71□□□□□ -0.37
VMP1-207ENST00000588131 NFASCO94856 1347 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 POTEB3A0JP26 581 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 SORBS3O60504 671 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 ARIH2O95376 493 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 SNAI1O95863 264 aaPredicted RBP12.7□□□□□ -0.38
VMP1-207ENST00000588131 CCNE2O96020 404 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 PRR29P0C7W0 189 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 CCT6AP40227 531 aaKnown RBP12.7□□□□□ -0.38
VMP1-207ENST00000588131 STAT6P42226 847 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 LACTBP83111 547 aaPredicted RBP12.7□□□□□ -0.38
VMP1-207ENST00000588131 SP2Q02086 613 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 HYIQ5T013 277 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 RRAGBQ5VZM2 374 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 POTEBQ6S5H4 581 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 MAMDC4Q6UXC1 1216 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 RBM43Q6ZSC3 357 aaKnown RBP12.7□□□□□ -0.38
VMP1-207ENST00000588131 CKAP2LQ8IYA6 745 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 GRAMD1CQ8IYS0 662 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 IQUBQ8NA54 791 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 CALML4Q96GE6 196 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 TRIM47Q96LD4 638 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 EIF2AK1Q9BQI3 630 aaKnown RBP12.7□□□□□ -0.38
VMP1-207ENST00000588131 SDF4Q9BRK5 362 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 KATNBL1Q9H079 304 aa12.7□□□□□ -0.38
VMP1-207ENST00000588131 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.7□□□□□ -0.38
VMP1-207ENST00000588131 CTAGE5O15320 804 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 HOXC6P09630 235 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 SLFN14P0C7P3 912 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 SPATA31C1P0DKV0 1188 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 CYP2B6P20813 491 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 UBA1P22314 1058 aaKnown RBP12.69□□□□□ -0.38
VMP1-207ENST00000588131 PSMC4P43686 418 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 FCGRTP55899 365 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 MDM2Q00987 491 aaPredicted RBP12.69□□□□□ -0.38
VMP1-207ENST00000588131 CYP4A11Q02928 519 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 EPHA7Q15375 998 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 HAUS3Q68CZ6 603 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 MIER3Q7Z3K6 550 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 KCNK18Q7Z418 384 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 SH3RF1Q7Z6J0 888 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 CATSPER3Q86XQ3 398 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 ERMNQ8TAM6 284 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 STAMQ92783 540 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 PAGE5Q96GU1 130 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 DYDC2Q96IM9 177 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms