RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 PBX1P40424 430 aa24.83■■□□□ 1.57
CIRBP-208ENST00000586548 COPB1P53618 953 aaKnown RBP24.83■■□□□ 1.57
CIRBP-208ENST00000586548 COASYQ13057 564 aa24.83■■□□□ 1.57
CIRBP-208ENST00000586548 COG2Q14746 738 aa24.83■■□□□ 1.57
CIRBP-208ENST00000586548 IRF2BP1Q8IU81 584 aa24.83■■□□□ 1.57
CIRBP-208ENST00000586548 CCDC65Q8IXS2 484 aa24.83■■□□□ 1.57
CIRBP-208ENST00000586548 CCDC112Q8NEF3 446 aa24.83■■□□□ 1.57
CIRBP-208ENST00000586548 RBM46Q8TBY0 533 aaKnown RBP24.83■■□□□ 1.57
CIRBP-208ENST00000586548 HPS3Q969F9 1004 aa24.83■■□□□ 1.57
CIRBP-208ENST00000586548 ZNF577Q9BSK1 485 aa24.83■■□□□ 1.57
CIRBP-208ENST00000586548 WDR11Q9BZH6 1224 aa24.83■■□□□ 1.57
CIRBP-208ENST00000586548 TUFT1Q9NNX1 390 aa24.83■■□□□ 1.57
CIRBP-208ENST00000586548 PANK4Q9NVE7 773 aa24.83■■□□□ 1.57
CIRBP-208ENST00000586548 SNCAIPQ9Y6H5 919 aa24.83■■□□□ 1.57
CIRBP-208ENST00000586548 KCNJ6P48051 423 aa24.82■■□□□ 1.56
CIRBP-208ENST00000586548 PRKG1Q13976 671 aa24.82■■□□□ 1.56
CIRBP-208ENST00000586548 PCNX4Q63HM2 1172 aa24.82■■□□□ 1.56
CIRBP-208ENST00000586548 CATSPERGQ6ZRH7 1159 aa24.82■■□□□ 1.56
CIRBP-208ENST00000586548 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.82■■□□□ 1.56
CIRBP-208ENST00000586548 L3MBTL3Q96JM7 780 aaPredicted RBP24.82■■□□□ 1.56
CIRBP-208ENST00000586548 SRRTQ9BXP5 876 aaKnown RBP24.82■■□□□ 1.56
CIRBP-208ENST00000586548 MYPNQ86TC9 1320 aa24.82■■□□□ 1.56
CIRBP-208ENST00000586548 ADM5C9JUS6 153 aa24.81■■□□□ 1.56
CIRBP-208ENST00000586548 ARP10275 920 aa24.81■■□□□ 1.56
CIRBP-208ENST00000586548 MUTP22033 750 aa24.81■■□□□ 1.56
CIRBP-208ENST00000586548 RPS6P62753 249 aaKnown RBP24.81■■□□□ 1.56
CIRBP-208ENST00000586548 VGLL4Q14135 290 aa24.81■■□□□ 1.56
CIRBP-208ENST00000586548 PTPN21Q16825 1174 aa24.81■■□□□ 1.56
CIRBP-208ENST00000586548 CENPPQ6IPU0 288 aa24.81■■□□□ 1.56
CIRBP-208ENST00000586548 CSGALNACT2Q8N6G5 542 aa24.81■■□□□ 1.56
CIRBP-208ENST00000586548 SYT2Q8N9I0 419 aaPredicted RBP24.81■■□□□ 1.56
CIRBP-208ENST00000586548 WNK4Q96J92 1243 aa24.81■■□□□ 1.56
CIRBP-208ENST00000586548 RIT2Q99578 217 aa24.81■■□□□ 1.56
CIRBP-208ENST00000586548 TEKT3Q9BXF9 490 aa24.81■■□□□ 1.56
CIRBP-208ENST00000586548 N4BP3O15049 544 aa24.81■■□□□ 1.56
CIRBP-208ENST00000586548 PPP1R12BO60237 982 aaPredicted RBP24.81■■□□□ 1.56
CIRBP-208ENST00000586548 ANKRD40Q6AI12 368 aa24.81■■□□□ 1.56
CIRBP-208ENST00000586548 DPY19L2Q6NUT2 758 aa24.81■■□□□ 1.56
CIRBP-208ENST00000586548 FOXR2Q6PJQ5 311 aa24.81■■□□□ 1.56
CIRBP-208ENST00000586548 HSD17B14Q9BPX1 270 aa24.81■■□□□ 1.56
CIRBP-208ENST00000586548 KCND1Q9NSA2 647 aa24.81■■□□□ 1.56
CIRBP-208ENST00000586548 RNF146Q9NTX7 359 aa24.81■■□□□ 1.56
CIRBP-208ENST00000586548 ITIH6Q6UXX5 1313 aa24.8■■□□□ 1.56
CIRBP-208ENST00000586548 PTPRFP10586 1907 aa24.8■■□□□ 1.56
CIRBP-208ENST00000586548 ATP2A1O14983 1001 aa24.8■■□□□ 1.56
CIRBP-208ENST00000586548 ITGB5P18084 799 aa24.8■■□□□ 1.56
CIRBP-208ENST00000586548 FAM26FQ5R3K3 315 aa24.8■■□□□ 1.56
CIRBP-208ENST00000586548 B3GNT9Q6UX72 402 aa24.8■■□□□ 1.56
CIRBP-208ENST00000586548 RNF207Q6ZRF8 634 aa24.8■■□□□ 1.56
CIRBP-208ENST00000586548 FAM114A1Q8IWE2 563 aa24.8■■□□□ 1.56
CIRBP-208ENST00000586548 IL31RAQ8NI17 732 aa24.8■■□□□ 1.56
CIRBP-208ENST00000586548 TAB2Q9NYJ8 693 aa24.8■■□□□ 1.56
CIRBP-208ENST00000586548 MAGEC2Q9UBF1 373 aaPredicted RBP24.8■■□□□ 1.56
CIRBP-208ENST00000586548 UBIAD1Q9Y5Z9 338 aa24.8■■□□□ 1.56
CIRBP-208ENST00000586548 CSADQ9Y600 493 aa24.8■■□□□ 1.56
CIRBP-208ENST00000586548 FRMD3A2A2Y4 597 aa24.79■■□□□ 1.56
CIRBP-208ENST00000586548 IPO5O00410 1097 aaKnown RBP24.79■■□□□ 1.56
CIRBP-208ENST00000586548 EYA4O95677 639 aa24.79■■□□□ 1.56
CIRBP-208ENST00000586548 PSMC6P62333 389 aa24.79■■□□□ 1.56
CIRBP-208ENST00000586548 CYP4A11Q02928 519 aa24.79■■□□□ 1.56
CIRBP-208ENST00000586548 SLC30A10Q6XR72 485 aa24.79■■□□□ 1.56
CIRBP-208ENST00000586548 USP50Q70EL3 339 aaPredicted RBP24.79■■□□□ 1.56
CIRBP-208ENST00000586548 TMX1Q9H3N1 280 aa24.79■■□□□ 1.56
CIRBP-208ENST00000586548 SEMA6BQ9H3T3 888 aa24.79■■□□□ 1.56
CIRBP-208ENST00000586548 KRT18P05783 430 aaKnown RBP24.78■■□□□ 1.56
CIRBP-208ENST00000586548 PABPC4Q13310 644 aaKnown RBP eCLIP24.78■■□□□ 1.563e-9■□□□□ 9.7
CIRBP-208ENST00000586548 ARSHQ5FYA8 562 aa24.78■■□□□ 1.56
CIRBP-208ENST00000586548 SNRNP48Q6IEG0 339 aaKnown RBP24.78■■□□□ 1.56
CIRBP-208ENST00000586548 TAAR1Q96RJ0 339 aa24.78■■□□□ 1.56
CIRBP-208ENST00000586548 VPS16Q9H269 839 aa24.78■■□□□ 1.56
CIRBP-208ENST00000586548 HOXC10Q9NYD6 342 aa24.78■■□□□ 1.56
CIRBP-208ENST00000586548 ZNF214Q9UL59 606 aaPredicted RBP24.78■■□□□ 1.56
CIRBP-208ENST00000586548 IREB2P48200 963 aaKnown RBP24.78■■□□□ 1.56
CIRBP-208ENST00000586548 LRRC63Q05C16 580 aa24.78■■□□□ 1.56
CIRBP-208ENST00000586548 EPHA7Q15375 998 aa24.78■■□□□ 1.56
CIRBP-208ENST00000586548 TKFCQ3LXA3 575 aa24.78■■□□□ 1.56
CIRBP-208ENST00000586548 DNTTIP2Q5QJE6 756 aaKnown RBP24.78■■□□□ 1.56
CIRBP-208ENST00000586548 NSMFQ6X4W1 530 aa24.78■■□□□ 1.56
CIRBP-208ENST00000586548 ZFP91Q96JP5 570 aaPredicted RBP24.78■■□□□ 1.56
CIRBP-208ENST00000586548 MAF1Q9H063 256 aa24.78■■□□□ 1.56
CIRBP-208ENST00000586548 UNC45AQ9H3U1 944 aa24.78■■□□□ 1.56
CIRBP-208ENST00000586548 JADE2Q9NQC1 790 aa24.78■■□□□ 1.56
CIRBP-208ENST00000586548 KCNH7Q9NS40 1196 aa24.78■■□□□ 1.56
CIRBP-208ENST00000586548 RGL1Q9NZL6 768 aa24.78■■□□□ 1.56
CIRBP-208ENST00000586548 RIPK3Q9Y572 518 aa24.78■■□□□ 1.56
CIRBP-208ENST00000586548 CHMP2AO43633 222 aa24.77■■□□□ 1.56
CIRBP-208ENST00000586548 MRPS9P82933 396 aaKnown RBP24.77■■□□□ 1.56
CIRBP-208ENST00000586548 PGM5Q15124 567 aa24.77■■□□□ 1.56
CIRBP-208ENST00000586548 DLK2Q6UY11 383 aa24.77■■□□□ 1.56
CIRBP-208ENST00000586548 MYOCDQ8IZQ8 938 aa24.77■■□□□ 1.56
CIRBP-208ENST00000586548 TC2NQ8N9U0 490 aa24.77■■□□□ 1.56
CIRBP-208ENST00000586548 ZC3H15Q8WU90 426 aaKnown RBP24.77■■□□□ 1.56
CIRBP-208ENST00000586548 DYDC2Q96IM9 177 aa24.77■■□□□ 1.56
CIRBP-208ENST00000586548 PXMP2Q9NR77 195 aa24.77■■□□□ 1.56
CIRBP-208ENST00000586548 PCDHA2Q9Y5H9 948 aa24.77■■□□□ 1.56
CIRBP-208ENST00000586548 NPHP3-ACAD11A0A0J9YXS1 232 aa24.76■■□□□ 1.55
CIRBP-208ENST00000586548 SPDYE16A6NNV3 312 aaPredicted RBP24.76■■□□□ 1.55
CIRBP-208ENST00000586548 SLITRK3O94933 977 aa24.76■■□□□ 1.55
CIRBP-208ENST00000586548 TMEM132BQ14DG7 1078 aa24.76■■□□□ 1.55
CIRBP-208ENST00000586548 NEK9Q8TD19 979 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms