RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-222	ENST00000584908	HAS3	O00219	553 aa		18.54	■□□□□ 0.56
ERBB2-222	ENST00000584908	ATP9A	O75110	1047 aa		18.54	■□□□□ 0.56
ERBB2-222	ENST00000584908	FDPS	P14324	419 aa	Known RBP	18.54	■□□□□ 0.56
ERBB2-222	ENST00000584908	NLRP5	P59047	1200 aa		18.54	■□□□□ 0.56
ERBB2-222	ENST00000584908	ST3GAL1	Q11201	340 aa		18.54	■□□□□ 0.56
ERBB2-222	ENST00000584908	CYP2W1	Q8TAV3	490 aa		18.54	■□□□□ 0.56
ERBB2-222	ENST00000584908	GPR20	Q99678	358 aa		18.54	■□□□□ 0.56
ERBB2-222	ENST00000584908	PHF20	Q9BVI0	1012 aa		18.54	■□□□□ 0.56
ERBB2-222	ENST00000584908	PRDM5	Q9NQX1	630 aa	Predicted RBP	18.54	■□□□□ 0.56
ERBB2-222	ENST00000584908	KCNH7	Q9NS40	1196 aa		18.54	■□□□□ 0.56
ERBB2-222	ENST00000584908	TMEM39A	Q9NV64	488 aa		18.54	■□□□□ 0.56
ERBB2-222	ENST00000584908	ITGB8	P26012	769 aa		18.53	■□□□□ 0.56
ERBB2-222	ENST00000584908	CIITA	P33076	1130 aa		18.53	■□□□□ 0.56
ERBB2-222	ENST00000584908	BLID	Q8IZY5	108 aa		18.53	■□□□□ 0.56
ERBB2-222	ENST00000584908	RASGRP4	Q8TDF6	673 aa		18.53	■□□□□ 0.56
ERBB2-222	ENST00000584908	WASF1	Q92558	559 aa		18.53	■□□□□ 0.56
ERBB2-222	ENST00000584908	ZSCAN31	Q96LW9	406 aa	Predicted RBP	18.53	■□□□□ 0.56
ERBB2-222	ENST00000584908	C16orf70	Q9BSU1	422 aa		18.53	■□□□□ 0.56
ERBB2-222	ENST00000584908	KATNAL1	Q9BW62	490 aa		18.53	■□□□□ 0.56
ERBB2-222	ENST00000584908	ORC3	Q9UBD5	711 aa	Predicted RBP	18.53	■□□□□ 0.56
ERBB2-222	ENST00000584908	NFASC	O94856	1347 aa		18.53	■□□□□ 0.56
ERBB2-222	ENST00000584908	IGLV3-22	A0A075B6J6	115 aa		18.52	■□□□□ 0.56
ERBB2-222	ENST00000584908	FAM86B1	E9PN63	330 aa		18.52	■□□□□ 0.56
ERBB2-222	ENST00000584908	B4GALT4	O60513	344 aa		18.52	■□□□□ 0.56
ERBB2-222	ENST00000584908	FAM86B2	P0C5J1	330 aa		18.52	■□□□□ 0.56
ERBB2-222	ENST00000584908	XBP1	P17861	261 aa		18.52	■□□□□ 0.56
ERBB2-222	ENST00000584908	LBHD1	Q9BQE6	289 aa	Predicted RBP	18.52	■□□□□ 0.56
ERBB2-222	ENST00000584908	BACH2	Q9BYV9	841 aa		18.52	■□□□□ 0.56
ERBB2-222	ENST00000584908	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.52	■□□□□ 0.56
ERBB2-222	ENST00000584908	NOP56	O00567	594 aa	Known RBP	18.51	■□□□□ 0.55
ERBB2-222	ENST00000584908	EDIL3	O43854	480 aa		18.51	■□□□□ 0.55
ERBB2-222	ENST00000584908	SORBS3	O60504	671 aa		18.51	■□□□□ 0.55
ERBB2-222	ENST00000584908	TIMP1	P01033	207 aa		18.51	■□□□□ 0.55
ERBB2-222	ENST00000584908	SUPT20HL2	P0C7V6	817 aa		18.51	■□□□□ 0.55
ERBB2-222	ENST00000584908	ZNF286B	P0CG31	522 aa		18.51	■□□□□ 0.55
ERBB2-222	ENST00000584908	AR	P10275	920 aa		18.51	■□□□□ 0.55
ERBB2-222	ENST00000584908	RAG1	P15918	1043 aa		18.51	■□□□□ 0.55
ERBB2-222	ENST00000584908	PSEN2	P49810	448 aa		18.51	■□□□□ 0.55
ERBB2-222	ENST00000584908	USP11	P51784	963 aa		18.51	■□□□□ 0.55
ERBB2-222	ENST00000584908	MDM2	Q00987	491 aa	Predicted RBP	18.51	■□□□□ 0.55
ERBB2-222	ENST00000584908	HABP4	Q5JVS0	413 aa	Known RBP	18.51	■□□□□ 0.55
ERBB2-222	ENST00000584908	LLPH	Q9BRT6	129 aa	Known RBP	18.51	■□□□□ 0.55
ERBB2-222	ENST00000584908	TRPV6	Q9H1D0	765 aa		18.51	■□□□□ 0.55
ERBB2-222	ENST00000584908	PCDH10	Q9P2E7	1040 aa		18.51	■□□□□ 0.55
ERBB2-222	ENST00000584908	TRIP12	Q14669	1992 aa	Predicted RBP	18.51	■□□□□ 0.55
ERBB2-222	ENST00000584908	LGALS2	P05162	132 aa		18.5	■□□□□ 0.55
ERBB2-222	ENST00000584908	MFSD10	Q14728	455 aa		18.5	■□□□□ 0.55
ERBB2-222	ENST00000584908	BAD	Q92934	168 aa		18.5	■□□□□ 0.55
ERBB2-222	ENST00000584908	ALG1	Q9BT22	464 aa		18.5	■□□□□ 0.55
ERBB2-222	ENST00000584908	AGO4	Q9HCK5	861 aa	Known RBP	18.5	■□□□□ 0.55
ERBB2-222	ENST00000584908	KCNJ14	Q9UNX9	436 aa		18.5	■□□□□ 0.55
ERBB2-222	ENST00000584908	TELO2	Q9Y4R8	837 aa		18.5	■□□□□ 0.55
ERBB2-222	ENST00000584908	LAMA2	P24043	3122 aa	Known RBP	18.5	■□□□□ 0.55
ERBB2-222	ENST00000584908		H3BRB1	525 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	HOXC8	P31273	242 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	ZNF76	P36508	570 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	SET	Q01105	290 aa	Predicted RBP	18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	ITGB3BP	Q13352	177 aa	Predicted RBP	18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	KIAA0753	Q2KHM9	967 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	MFSD5	Q6N075	450 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	SEPT1	Q8WYJ6	367 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	LENG9	Q96B70	501 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	NOC4L	Q9BVI4	516 aa	Known RBP	18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	TUT1	Q9H6E5	874 aa	Known RBP	18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	JPH1	Q9HDC5	661 aa	Predicted RBP	18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	TRMT13	Q9NUP7	481 aa	Known RBP	18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	GTF2IRD1	Q9UHL9	959 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	LAMA3	Q16787	3333 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	GSTTP1	A0A1W2PQM5	241 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	DHX15	O43143	795 aa	Known RBP	18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	ST18	O60284	1047 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	JAK2	O60674	1132 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	DTNB	O60941	627 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	FAM47C	Q5HY64	1035 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	KRT25	Q7Z3Z0	450 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	PLA2G4D	Q86XP0	818 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	TBCK	Q8TEA7	893 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	KAT6A	Q92794	2004 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	CTAGE1	Q96RT6	745 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	UBE2O	Q9C0C9	1292 aa	Known RBP	18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	GJB4	Q9NTQ9	266 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	SLC9A2	Q9UBY0	812 aa		18.49	■□□□□ 0.55
ERBB2-222	ENST00000584908	WDR81	Q562E7	1941 aa		18.48	■□□□□ 0.55
ERBB2-222	ENST00000584908	TANC1	Q9C0D5	1861 aa		18.48	■□□□□ 0.55
ERBB2-222	ENST00000584908	CYP3A7-CYP3A51P	A0A087WV96	503 aa		18.48	■□□□□ 0.55
ERBB2-222	ENST00000584908	CYP3A7	P24462	503 aa		18.48	■□□□□ 0.55
ERBB2-222	ENST00000584908	TCF7	P36402	384 aa	Predicted RBP	18.48	■□□□□ 0.55
ERBB2-222	ENST00000584908	GDF6	Q6KF10	455 aa	Predicted RBP	18.48	■□□□□ 0.55
ERBB2-222	ENST00000584908	MOXD1	Q6UVY6	613 aa		18.48	■□□□□ 0.55
ERBB2-222	ENST00000584908	CCDC83	Q8IWF9	413 aa		18.48	■□□□□ 0.55
ERBB2-222	ENST00000584908	TDH	Q8IZJ6	230 aa		18.48	■□□□□ 0.55
ERBB2-222	ENST00000584908	C7orf31	Q8N865	590 aa		18.48	■□□□□ 0.55
ERBB2-222	ENST00000584908	SDF4	Q9BRK5	362 aa		18.48	■□□□□ 0.55
ERBB2-222	ENST00000584908	HIPK3	Q9H422	1215 aa		18.48	■□□□□ 0.55
ERBB2-222	ENST00000584908	PKD2L1	Q9P0L9	805 aa		18.48	■□□□□ 0.55
ERBB2-222	ENST00000584908	HDAC6	Q9UBN7	1215 aa		18.48	■□□□□ 0.55
ERBB2-222	ENST00000584908	EMSY	Q7Z589	1322 aa		18.47	■□□□□ 0.55
ERBB2-222	ENST00000584908	IPO5	O00410	1097 aa	Known RBP	18.47	■□□□□ 0.55
ERBB2-222	ENST00000584908	LGR5	O75473	907 aa		18.47	■□□□□ 0.55
ERBB2-222	ENST00000584908	ATG7	O95352	703 aa		18.47	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms