RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 LRCH2Q5VUJ6 765 aa6.4□□□□□ -1.39
RTTN-209ENST00000583043 SEPT12Q8IYM1 358 aa6.4□□□□□ -1.39
RTTN-209ENST00000583043 SPATA20Q8TB22 786 aa6.4□□□□□ -1.39
RTTN-209ENST00000583043 TBC1D16Q8TBP0 767 aa6.4□□□□□ -1.39
RTTN-209ENST00000583043 SLITRK6Q9H5Y7 841 aa6.4□□□□□ -1.39
RTTN-209ENST00000583043 RIOX1Q9H6W3 641 aa6.4□□□□□ -1.39
RTTN-209ENST00000583043 INCENPQ9NQS7 918 aa6.4□□□□□ -1.39
RTTN-209ENST00000583043 KCPQ6ZWJ8 1503 aa6.4□□□□□ -1.39
RTTN-209ENST00000583043 N4BP2Q86UW6 1770 aaPredicted RBP6.4□□□□□ -1.39
RTTN-209ENST00000583043 PPP1R3GB7ZBB8 358 aa6.4□□□□□ -1.39
RTTN-209ENST00000583043 MAFGO15525 162 aa6.4□□□□□ -1.39
RTTN-209ENST00000583043 P4HA1P13674 534 aa6.4□□□□□ -1.39
RTTN-209ENST00000583043 BAG6P46379 1132 aa6.4□□□□□ -1.39
RTTN-209ENST00000583043 FAM186BQ8IYM0 893 aa6.4□□□□□ -1.39
RTTN-209ENST00000583043 PARD6BQ9BYG5 372 aa6.4□□□□□ -1.39
RTTN-209ENST00000583043 SLC39A2Q9NP94 309 aa6.4□□□□□ -1.39
RTTN-209ENST00000583043 CES2O00748 559 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 PHACTR2O75167 634 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 PRPF6O94906 941 aaKnown RBP6.39□□□□□ -1.39
RTTN-209ENST00000583043 SLMAPQ14BN4 828 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 SLFN12LQ6IEE8 588 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 RASSF4Q9H2L5 321 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 FBXO40Q9UH90 709 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 TAF6LQ9Y6J9 622 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 LDHAP00338 332 aaKnown RBP6.39□□□□□ -1.39
RTTN-209ENST00000583043 CRKP46108 304 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 CAV1Q03135 178 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 PRR5LQ6MZQ0 368 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 PDXDC1Q6P996 788 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 SAMD1Q6SPF0 538 aaPredicted RBP6.39□□□□□ -1.39
RTTN-209ENST00000583043 CCDC121Q6ZUS5 278 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 CMTR1Q8N1G2 835 aaKnown RBP6.39□□□□□ -1.39
RTTN-209ENST00000583043 LINC00116Q8NCU8 138 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 SREK1Q8WXA9 508 aaKnown RBP6.39□□□□□ -1.39
RTTN-209ENST00000583043 LPAR1Q92633 364 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 PPME1Q9Y570 386 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 AK9Q5TCS8 1911 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 GTPBP10A4D1E9 387 aaKnown RBP6.39□□□□□ -1.39
RTTN-209ENST00000583043 HMGB1P1B2RPK0 211 aaPredicted RBP6.39□□□□□ -1.39
RTTN-209ENST00000583043 PRELPP51888 382 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 BIRC3Q13489 604 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 WDR93Q6P2C0 686 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 FBXO38Q6PIJ6 1188 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 MCPH1Q8NEM0 835 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 CEP95Q96GE4 821 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 RIT2Q99578 217 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 CENPHQ9H3R5 247 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 NRBP2Q9NSY0 501 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 SAMD15Q9P1V8 674 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.39□□□□□ -1.39
RTTN-209ENST00000583043 DAGLAQ9Y4D2 1042 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 LAMB4A4D0S4 1761 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 NPEPPSP55786 919 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 GPSM2P81274 684 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 PRPF4BQ13523 1007 aaKnown RBP6.39□□□□□ -1.39
RTTN-209ENST00000583043 TERF2Q15554 542 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 KNOP1Q1ED39 458 aaKnown RBP6.39□□□□□ -1.39
RTTN-209ENST00000583043 LRRC47Q8N1G4 583 aaKnown RBP6.39□□□□□ -1.39
RTTN-209ENST00000583043 GMCL1P1Q8NEA9 526 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 CAPZA3Q96KX2 299 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 PLIN2Q99541 437 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 DESI2Q9BSY9 194 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 CTTNBP2NLQ9P2B4 639 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 GAKO14976 1311 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 ATP8B3O60423 1300 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 ERICH4A6NGS2 130 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 PODXLO00592 558 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 MAPTP10636 758 aaKnown RBP6.39□□□□□ -1.39
RTTN-209ENST00000583043 CTNNA2P26232 953 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 POLR2FP61218 127 aaKnown RBP6.39□□□□□ -1.39
RTTN-209ENST00000583043 FAM160B1Q5W0V3 765 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 MMGT1Q8N4V1 131 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 TMX1Q9H3N1 280 aa6.39□□□□□ -1.39
RTTN-209ENST00000583043 FAM187AA6NFU0 413 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 CEP104O60308 925 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 MYBL1P10243 752 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 POLR2BP30876 1174 aaKnown RBP6.38□□□□□ -1.39
RTTN-209ENST00000583043 COASYQ13057 564 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 TXNRD1Q16881 649 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 FKBP1CQ5VVH2 108 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 PDXDC2PQ6P474 469 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 SND1Q7KZF4 910 aaKnown RBP eCLIP6.38□□□□□ -1.39
RTTN-209ENST00000583043 ILDR1Q86SU0 546 aaPredicted RBP6.38□□□□□ -1.39
RTTN-209ENST00000583043 GMCL1Q96IK5 515 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 FOXP3Q9BZS1 431 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 QTRT2Q9H974 415 aaKnown RBP6.38□□□□□ -1.39
RTTN-209ENST00000583043 PPCSQ9HAB8 311 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 VEZTQ9HBM0 779 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 FAM217BQ9NTX9 383 aaPredicted RBP6.38□□□□□ -1.39
RTTN-209ENST00000583043 STIM2Q9P246 746 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 MAPK8IP1Q9UQF2 711 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 hCG_1642624A0A1W2PR95 340 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 SOWAHDA6NJG2 315 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 SPOPO43791 374 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 ALDH3A1P30838 453 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 ARHGAP4P98171 946 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 MYL7Q01449 175 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 DMP1Q13316 513 aaPredicted RBP6.38□□□□□ -1.39
RTTN-209ENST00000583043 OTUD6BQ8N6M0 293 aa6.38□□□□□ -1.39
RTTN-209ENST00000583043 C3orf20Q8ND61 904 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms