RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 ANO3Q9BYT9 981 aa14.19□□□□□ -0.14
SMARCD2-209ENST00000581832 GLT8D2Q9H1C3 349 aa14.19□□□□□ -0.14
SMARCD2-209ENST00000581832 HDAC6Q9UBN7 1215 aa14.19□□□□□ -0.14
SMARCD2-209ENST00000581832 GTF2IRD1Q9UHL9 959 aa14.19□□□□□ -0.14
SMARCD2-209ENST00000581832 MAFGO15525 162 aa14.18□□□□□ -0.14
SMARCD2-209ENST00000581832 HOXC8P31273 242 aa14.18□□□□□ -0.14
SMARCD2-209ENST00000581832 CCL23P55773 120 aa14.18□□□□□ -0.14
SMARCD2-209ENST00000581832 AP3B2Q13367 1082 aa14.18□□□□□ -0.14
SMARCD2-209ENST00000581832 PPIGQ13427 754 aaKnown RBP eCLIP14.18□□□□□ -0.141e-7■■■■□ 23.6
SMARCD2-209ENST00000581832 MFSD10Q14728 455 aa14.18□□□□□ -0.14
SMARCD2-209ENST00000581832 KIAA0753Q2KHM9 967 aa14.18□□□□□ -0.14
SMARCD2-209ENST00000581832 C8orf34Q49A92 452 aa14.18□□□□□ -0.14
SMARCD2-209ENST00000581832 FAM47CQ5HY64 1035 aa14.18□□□□□ -0.14
SMARCD2-209ENST00000581832 TMEM199Q8N511 208 aa14.18□□□□□ -0.14
SMARCD2-209ENST00000581832 DHX38Q92620 1227 aaKnown RBP14.18□□□□□ -0.14
SMARCD2-209ENST00000581832 MXRA8Q9BRK3 442 aa14.18□□□□□ -0.14
SMARCD2-209ENST00000581832 SLC26A6Q9BXS9 759 aa14.18□□□□□ -0.14
SMARCD2-209ENST00000581832 TPCN1Q9ULQ1 816 aa14.18□□□□□ -0.14
SMARCD2-209ENST00000581832 CHD7Q9P2D1 2997 aa14.18□□□□□ -0.14
SMARCD2-209ENST00000581832 TANC1Q9C0D5 1861 aa14.17□□□□□ -0.14
SMARCD2-209ENST00000581832 MEIS1O00470 390 aa14.17□□□□□ -0.14
SMARCD2-209ENST00000581832 LGALS2P05162 132 aa14.17□□□□□ -0.14
SMARCD2-209ENST00000581832 CYP3A4P08684 503 aa14.17□□□□□ -0.14
SMARCD2-209ENST00000581832 ACRP10323 421 aa14.17□□□□□ -0.14
SMARCD2-209ENST00000581832 RBL2Q08999 1139 aa14.17□□□□□ -0.14
SMARCD2-209ENST00000581832 SCRN1Q12765 414 aa14.17□□□□□ -0.14
SMARCD2-209ENST00000581832 MTMR1Q13613 665 aa14.17□□□□□ -0.14
SMARCD2-209ENST00000581832 GPNMBQ14956 572 aa14.17□□□□□ -0.14
SMARCD2-209ENST00000581832 PTGISQ16647 500 aa14.17□□□□□ -0.14
SMARCD2-209ENST00000581832 ZNF365Q70YC5 407 aa14.17□□□□□ -0.14
SMARCD2-209ENST00000581832 SCLYQ96I15 445 aa14.17□□□□□ -0.14
SMARCD2-209ENST00000581832 CDHR1Q96JP9 859 aa14.17□□□□□ -0.14
SMARCD2-209ENST00000581832 ALG1Q9BT22 464 aa14.17□□□□□ -0.14
SMARCD2-209ENST00000581832 KATNAL1Q9BW62 490 aa14.17□□□□□ -0.14
SMARCD2-209ENST00000581832 IL23AQ9NPF7 189 aa14.17□□□□□ -0.14
SMARCD2-209ENST00000581832 KCNH7Q9NS40 1196 aa14.17□□□□□ -0.14
SMARCD2-209ENST00000581832 GSTTP1A0A1W2PQM5 241 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 FAM86B1E9PN63 330 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 H3BRB1 525 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 M0R2N6 131 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 PITPNM1O00562 1244 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 PFKFB2O60825 505 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 FAM86B2P0C5J1 330 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 ARP10275 920 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 AK2P54819 239 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 ARHGAP4P98171 946 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 ZNF200P98182 395 aaPredicted RBP14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 STK3Q13188 491 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 NPY5RQ15761 445 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 TRIM71Q2Q1W2 868 aaKnown RBP14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 CEP55Q53EZ4 464 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 JAKMIP3Q5VZ66 844 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 GIMAP8Q8ND71 665 aaPredicted RBP14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 WNT8BQ93098 351 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 TUT1Q9H6E5 874 aaKnown RBP14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 EHMT1Q9H9B1 1298 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 C6orf50Q9HD87 102 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 SH3GLB2Q9NR46 395 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 VPS54Q9P1Q0 977 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 EYSQ5T1H1 3165 aa14.16□□□□□ -0.14
SMARCD2-209ENST00000581832 WDR81Q562E7 1941 aa14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 IGLV3-22A0A075B6J6 115 aa14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 CTDNEP1O95476 244 aa14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 IQCF3P0C7M6 154 aa14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 GNA11P29992 359 aa14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 CHMP4BP1P59074 171 aa14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 ADAM17P78536 824 aa14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 SSRP1Q08945 709 aaKnown RBP14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 ITGB3BPQ13352 177 aaPredicted RBP14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 TRAF7Q6Q0C0 670 aa14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 TRIM50Q86XT4 487 aa14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 C7orf31Q8N865 590 aa14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 RASGRP4Q8TDF6 673 aa14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 CCDC12Q8WUD4 166 aaPredicted RBP14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 HERVK_113Q902F9 699 aa14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 RNPC3Q96LT9 517 aaKnown RBP14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 AIFM3Q96NN9 605 aa14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 PCYT2Q99447 389 aa14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 RNPEPQ9H4A4 650 aa14.15□□□□□ -0.14
SMARCD2-209ENST00000581832 NFASCO94856 1347 aa14.15□□□□□ -0.15
SMARCD2-209ENST00000581832 PRUNE2Q8WUY3 3088 aa14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 NOP56O00567 594 aaKnown RBP14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 DHX15O43143 795 aaKnown RBP14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 DEXIO95424 95 aa14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 LARGE1O95461 756 aa14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 CIITAP33076 1130 aa14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 SMAD3P84022 425 aaKnown RBP14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 AKAP17AQ02040 695 aaKnown RBP14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 ME3Q16798 604 aa14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 MCTP2Q6DN12 878 aa14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 FAM109BQ6ICB4 259 aaPredicted RBP14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 PSRC1Q6PGN9 363 aaPredicted RBP14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 Q7L0L9 218 aa14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 NIPA1Q7RTP0 329 aa14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 REXO1Q8N1G1 1221 aaKnown RBP14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 SEPT1Q8WYJ6 367 aa14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 KIF2CQ99661 725 aa14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 AGO4Q9HCK5 861 aaKnown RBP14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 CXXC1Q9P0U4 656 aaPredicted RBP14.14□□□□□ -0.15
SMARCD2-209ENST00000581832 GBF1Q92538 1859 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms