RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 OSBPL7Q9BZF2 842 aa16.27■□□□□ 0.2
CSNK1D-219ENST00000581660 GPCPD1Q9NPB8 672 aa16.27■□□□□ 0.2
CSNK1D-219ENST00000581660 INCENPQ9NQS7 918 aa16.27■□□□□ 0.2
CSNK1D-219ENST00000581660 TRPC6Q9Y210 931 aa16.27■□□□□ 0.2
CSNK1D-219ENST00000581660 USP15Q9Y4E8 981 aaPredicted RBP16.27■□□□□ 0.2
CSNK1D-219ENST00000581660 EP300Q09472 2414 aaPredicted RBP16.26■□□□□ 0.19
CSNK1D-219ENST00000581660 ORC4O43929 436 aa16.26■□□□□ 0.19
CSNK1D-219ENST00000581660 EIF3JO75822 258 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-219ENST00000581660 PDHBP11177 359 aa16.26■□□□□ 0.19
CSNK1D-219ENST00000581660 TOP1P11387 765 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-219ENST00000581660 ID4P47928 161 aa16.26■□□□□ 0.19
CSNK1D-219ENST00000581660 PTPN21Q16825 1174 aa16.26■□□□□ 0.19
CSNK1D-219ENST00000581660 PANK1Q8TE04 598 aa16.26■□□□□ 0.19
CSNK1D-219ENST00000581660 P2RX5Q93086 422 aa16.26■□□□□ 0.19
CSNK1D-219ENST00000581660 TAAR1Q96RJ0 339 aa16.26■□□□□ 0.19
CSNK1D-219ENST00000581660 TMEM47Q9BQJ4 181 aa16.26■□□□□ 0.19
CSNK1D-219ENST00000581660 COL20A1Q9P218 1284 aa16.26■□□□□ 0.19
CSNK1D-219ENST00000581660 DNAH14Q0VDD8 3507 aa16.25■□□□□ 0.19
CSNK1D-219ENST00000581660 C17orf102A2RUQ5 167 aa16.25■□□□□ 0.19
CSNK1D-219ENST00000581660 FGRP09769 529 aa16.25■□□□□ 0.19
CSNK1D-219ENST00000581660 ATF7P17544 494 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-219ENST00000581660 ZNF543Q08ER8 600 aa16.25■□□□□ 0.19
CSNK1D-219ENST00000581660 ATP6V0A1Q93050 837 aa16.25■□□□□ 0.19
CSNK1D-219ENST00000581660 RMDN3Q96TC7 470 aa16.25■□□□□ 0.19
CSNK1D-219ENST00000581660 C16orf70Q9BSU1 422 aa16.25■□□□□ 0.19
CSNK1D-219ENST00000581660 LRRCC1Q9C099 1032 aa16.25■□□□□ 0.19
CSNK1D-219ENST00000581660 ANAPC4Q9UJX5 808 aa16.25■□□□□ 0.19
CSNK1D-219ENST00000581660 PLAGL2Q9UPG8 496 aa16.25■□□□□ 0.19
CSNK1D-219ENST00000581660 MRVI1Q9Y6F6 885 aa16.25■□□□□ 0.19
CSNK1D-219ENST00000581660 TPRP12270 2363 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-219ENST00000581660 MYH7BA7E2Y1 1941 aa16.24■□□□□ 0.19
CSNK1D-219ENST00000581660 FOXP2O15409 715 aa16.24■□□□□ 0.19
CSNK1D-219ENST00000581660 RANBP6O60518 1105 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-219ENST00000581660 GLP2RO95838 553 aa16.24■□□□□ 0.19
CSNK1D-219ENST00000581660 SNHG28P0DPA3 235 aa16.24■□□□□ 0.19
CSNK1D-219ENST00000581660 NAALADL2Q58DX5 795 aa16.24■□□□□ 0.19
CSNK1D-219ENST00000581660 FAM26DQ5JW98 314 aa16.24■□□□□ 0.19
CSNK1D-219ENST00000581660 MYSM1Q5VVJ2 828 aa16.24■□□□□ 0.19
CSNK1D-219ENST00000581660 SUSD6Q92537 303 aa16.24■□□□□ 0.19
CSNK1D-219ENST00000581660 ZNF689Q96CS4 500 aaPredicted RBP16.24■□□□□ 0.19
CSNK1D-219ENST00000581660 ZBTB40Q9NUA8 1239 aa16.24■□□□□ 0.19
CSNK1D-219ENST00000581660 TTC3P53804 2025 aa16.23■□□□□ 0.19
CSNK1D-219ENST00000581660 KMT2BQ9UMN6 2715 aaPredicted RBP16.23■□□□□ 0.19
CSNK1D-219ENST00000581660 TREHO43280 583 aa16.23■□□□□ 0.19
CSNK1D-219ENST00000581660 CTSHP09668 335 aa16.23■□□□□ 0.19
CSNK1D-219ENST00000581660 DNAJB1P25685 340 aa16.23■□□□□ 0.19
CSNK1D-219ENST00000581660 CTDSPL2Q05D32 466 aa16.23■□□□□ 0.19
CSNK1D-219ENST00000581660 HSDL1Q3SXM5 330 aa16.23■□□□□ 0.19
CSNK1D-219ENST00000581660 USH1GQ495M9 461 aa16.23■□□□□ 0.19
CSNK1D-219ENST00000581660 ADGRD2Q7Z7M1 963 aa16.23■□□□□ 0.19
CSNK1D-219ENST00000581660 TBC1D5Q92609 795 aa16.23■□□□□ 0.19
CSNK1D-219ENST00000581660 RPGRIP1Q96KN7 1286 aa16.23■□□□□ 0.19
CSNK1D-219ENST00000581660 RIPOR3Q96MK2 946 aa16.23■□□□□ 0.19
CSNK1D-219ENST00000581660 SEC62Q99442 399 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-219ENST00000581660 TCP11L1Q9NUJ3 509 aa16.23■□□□□ 0.19
CSNK1D-219ENST00000581660 ABCB11O95342 1321 aa16.22■□□□□ 0.19
CSNK1D-219ENST00000581660 DMXL1Q9Y485 3027 aa16.22■□□□□ 0.19
CSNK1D-219ENST00000581660 KDM4AO75164 1064 aa16.22■□□□□ 0.19
CSNK1D-219ENST00000581660 PDGFBP01127 241 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-219ENST00000581660 SMIM10L2AP0DMW4 78 aa16.22■□□□□ 0.19
CSNK1D-219ENST00000581660 SMIM10L2BP0DMW5 78 aa16.22■□□□□ 0.19
CSNK1D-219ENST00000581660 BTG3Q14201 252 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-219ENST00000581660 CELF3Q5SZQ8 465 aaKnown RBP16.22■□□□□ 0.19
CSNK1D-219ENST00000581660 SPATA33Q96N06 139 aa16.22■□□□□ 0.19
CSNK1D-219ENST00000581660 BARX2Q9UMQ3 279 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-219ENST00000581660 RGS20O76081 388 aa16.21■□□□□ 0.19
CSNK1D-219ENST00000581660 ITGB1P05556 798 aa16.21■□□□□ 0.19
CSNK1D-219ENST00000581660 NR3C2P08235 984 aa16.21■□□□□ 0.19
CSNK1D-219ENST00000581660 ZMYM1Q5SVZ6 1142 aa16.21■□□□□ 0.19
CSNK1D-219ENST00000581660 KCNV1Q6PIU1 500 aa16.21■□□□□ 0.19
CSNK1D-219ENST00000581660 MCF2L2Q86YR7 1114 aa16.21■□□□□ 0.19
CSNK1D-219ENST00000581660 SPPL3Q8TCT6 385 aa16.21■□□□□ 0.19
CSNK1D-219ENST00000581660 RNPEPQ9H4A4 650 aa16.21■□□□□ 0.19
CSNK1D-219ENST00000581660 PXMP2Q9NR77 195 aa16.21■□□□□ 0.19
CSNK1D-219ENST00000581660 H3BRB1 525 aa16.2■□□□□ 0.18
CSNK1D-219ENST00000581660 SMARCA5O60264 1052 aaPredicted RBP16.2■□□□□ 0.18
CSNK1D-219ENST00000581660 DGKIO75912 1065 aa16.2■□□□□ 0.18
CSNK1D-219ENST00000581660 CSPG5O95196 566 aa16.2■□□□□ 0.18
CSNK1D-219ENST00000581660 EIF2AK2P19525 551 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-219ENST00000581660 NRIP1P48552 1158 aa16.2■□□□□ 0.18
CSNK1D-219ENST00000581660 GPATCH4Q5T3I0 446 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-219ENST00000581660 ARHGEF16Q5VV41 709 aa16.2■□□□□ 0.18
CSNK1D-219ENST00000581660 MCTP2Q6DN12 878 aa16.2■□□□□ 0.18
CSNK1D-219ENST00000581660 ATP8B4Q8TF62 1192 aa16.2■□□□□ 0.18
CSNK1D-219ENST00000581660 NKD2Q969F2 451 aaPredicted RBP16.2■□□□□ 0.18
CSNK1D-219ENST00000581660 GPATCH3Q96I76 525 aa16.2■□□□□ 0.18
CSNK1D-219ENST00000581660 TUT1Q9H6E5 874 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-219ENST00000581660 EHMT1Q9H9B1 1298 aa16.2■□□□□ 0.18
CSNK1D-219ENST00000581660 KIAA1671Q9BY89 1806 aa16.19■□□□□ 0.18
CSNK1D-219ENST00000581660 CEP250Q9BV73 2442 aa16.19■□□□□ 0.18
CSNK1D-219ENST00000581660 ACACBO00763 2458 aa16.19■□□□□ 0.18
CSNK1D-219ENST00000581660 GGPS1O95749 300 aa16.19■□□□□ 0.18
CSNK1D-219ENST00000581660 ADAM17P78536 824 aa16.19■□□□□ 0.18
CSNK1D-219ENST00000581660 GHRHRQ02643 423 aa16.19■□□□□ 0.18
CSNK1D-219ENST00000581660 CMTR2Q8IYT2 770 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-219ENST00000581660 TMEM105Q8N8V8 129 aa16.19■□□□□ 0.18
CSNK1D-219ENST00000581660 TTC14Q96N46 770 aa16.19■□□□□ 0.18
CSNK1D-219ENST00000581660 DDX19BQ9UMR2 479 aa16.19■□□□□ 0.18
CSNK1D-219ENST00000581660 MRPL42Q9Y6G3 142 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-219ENST00000581660 FSD2A1L4K1 749 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms