RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 DPP9Q86TI2 863 aa15.56■□□□□ 0.08
CDK5RAP3-219ENST00000580670 CKAP2LQ8IYA6 745 aa15.56■□□□□ 0.08
CDK5RAP3-219ENST00000580670 CEP57L1Q8IYX8 460 aa15.56■□□□□ 0.08
CDK5RAP3-219ENST00000580670 ERMNQ8TAM6 284 aa15.56■□□□□ 0.08
CDK5RAP3-219ENST00000580670 CDK5RAP3Q96JB5 506 aa15.56■□□□□ 0.08
CDK5RAP3-219ENST00000580670 CDHR1Q96JP9 859 aa15.56■□□□□ 0.08
CDK5RAP3-219ENST00000580670 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP3-219ENST00000580670 LOC102724159A0A0B4J2E5 919 aa15.55■□□□□ 0.08
CDK5RAP3-219ENST00000580670 ASB14A6NK59 587 aa15.55■□□□□ 0.08
CDK5RAP3-219ENST00000580670 SPATA31C2B4DYI2 1134 aa15.55■□□□□ 0.08
CDK5RAP3-219ENST00000580670 DDX39AO00148 427 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-219ENST00000580670 DHX15O43143 795 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-219ENST00000580670 CHMP2AO43633 222 aa15.55■□□□□ 0.08
CDK5RAP3-219ENST00000580670 ATP9AO75110 1047 aa15.55■□□□□ 0.08
CDK5RAP3-219ENST00000580670 PLCG1P19174 1290 aa15.55■□□□□ 0.08
CDK5RAP3-219ENST00000580670 CCT6AP40227 531 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-219ENST00000580670 PWP2Q15269 919 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-219ENST00000580670 SEPT14Q6ZU15 432 aa15.55■□□□□ 0.08
CDK5RAP3-219ENST00000580670 NUDT12Q9BQG2 462 aa15.55■□□□□ 0.08
CDK5RAP3-219ENST00000580670 UNC45AQ9H3U1 944 aa15.55■□□□□ 0.08
CDK5RAP3-219ENST00000580670 TBC1D22BQ9NU19 505 aa15.55■□□□□ 0.08
CDK5RAP3-219ENST00000580670 STK24Q9Y6E0 443 aa15.55■□□□□ 0.08
CDK5RAP3-219ENST00000580670 KIAA1217Q5T5P2 1943 aa15.55■□□□□ 0.08
CDK5RAP3-219ENST00000580670 EML1O00423 815 aa15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 MAP2K2P36507 400 aa15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 GRB10Q13322 594 aa15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 HAUS3Q68CZ6 603 aa15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 KANK3Q6NY19 840 aa15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 RBM43Q6ZSC3 357 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 EEPD1Q7L9B9 569 aa15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 MORC4Q8TE76 937 aa15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 CCDC34Q96HJ3 373 aa15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 HOOK1Q9UJC3 728 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 PLXNA1Q9UIW2 1896 aa15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 KDM3AQ9Y4C1 1321 aa15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 SLC26A4O43511 780 aa15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 ICAM3P32942 547 aa15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 ZNF445P59923 1031 aa15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 NAALADL2Q58DX5 795 aa15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 MORN1Q5T089 497 aa15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 PDXDC2PQ6P474 469 aa15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 ELOA2Q8IYF1 753 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 PNMA5Q96PV4 448 aa15.54■□□□□ 0.08
CDK5RAP3-219ENST00000580670 LRRC37A2A6NM11 1700 aa15.53■□□□□ 0.08
CDK5RAP3-219ENST00000580670 ZNF236Q9UL36 1845 aa15.53■□□□□ 0.08
CDK5RAP3-219ENST00000580670 FOXN1O15353 648 aa15.53■□□□□ 0.08
CDK5RAP3-219ENST00000580670 KCNA2P16389 499 aa15.53■□□□□ 0.08
CDK5RAP3-219ENST00000580670 TMEM119Q4V9L6 283 aa15.53■□□□□ 0.08
CDK5RAP3-219ENST00000580670 B3GNT9Q6UX72 402 aa15.53■□□□□ 0.08
CDK5RAP3-219ENST00000580670 ARMCX2Q7L311 632 aa15.53■□□□□ 0.08
CDK5RAP3-219ENST00000580670 ZNF467Q7Z7K2 595 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-219ENST00000580670 GRAMD1CQ8IYS0 662 aa15.53■□□□□ 0.08
CDK5RAP3-219ENST00000580670 ERCC4Q92889 916 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-219ENST00000580670 PAGE5Q96GU1 130 aa15.53■□□□□ 0.08
CDK5RAP3-219ENST00000580670 EIF2AK1Q9BQI3 630 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-219ENST00000580670 CUEDC2Q9H467 287 aa15.53■□□□□ 0.08
CDK5RAP3-219ENST00000580670 SLC5A4Q9NY91 659 aa15.53■□□□□ 0.08
CDK5RAP3-219ENST00000580670 TCEAL9Q9UHQ7 104 aa15.53■□□□□ 0.08
CDK5RAP3-219ENST00000580670 DIS3Q9Y2L1 958 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-219ENST00000580670 MCM3APO60318 1980 aa15.53■□□□□ 0.08
CDK5RAP3-219ENST00000580670 TNPO2O14787 897 aaKnown RBP15.52■□□□□ 0.08
CDK5RAP3-219ENST00000580670 MED24O75448 989 aa15.52■□□□□ 0.08
CDK5RAP3-219ENST00000580670 TBC1D8O95759 1140 aa15.52■□□□□ 0.08
CDK5RAP3-219ENST00000580670 AFMP43652 599 aa15.52■□□□□ 0.08
CDK5RAP3-219ENST00000580670 MAP2K5Q13163 448 aa15.52■□□□□ 0.08
CDK5RAP3-219ENST00000580670 PNOCQ13519 176 aa15.52■□□□□ 0.08
CDK5RAP3-219ENST00000580670 POSTNQ15063 836 aa15.52■□□□□ 0.08
CDK5RAP3-219ENST00000580670 ECM1Q16610 540 aa15.52■□□□□ 0.08
CDK5RAP3-219ENST00000580670 HYIQ5T013 277 aa15.52■□□□□ 0.08
CDK5RAP3-219ENST00000580670 MIER3Q7Z3K6 550 aa15.52■□□□□ 0.08
CDK5RAP3-219ENST00000580670 LRRC15Q8TF66 581 aa15.52■□□□□ 0.08
CDK5RAP3-219ENST00000580670 NT5C3AQ9H0P0 336 aa15.52■□□□□ 0.08
CDK5RAP3-219ENST00000580670 NFASCO94856 1347 aa15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 DOCK3Q8IZD9 2030 aa15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 POTEB3A0JP26 581 aa15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 RPA1P27694 616 aa15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 MDM2Q00987 491 aaPredicted RBP15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 KRT76Q01546 638 aa15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 CYP4A11Q02928 519 aa15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 EPHA7Q15375 998 aa15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 POTEBQ6S5H4 581 aa15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 LRSAM1Q6UWE0 723 aa15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 CATSPER3Q86XQ3 398 aa15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 FBXO16Q8IX29 292 aaPredicted RBP15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 NPLOC4Q8TAT6 608 aa15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 STAMQ92783 540 aa15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 MAML3Q96JK9 1138 aa15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 POLR3CQ9BUI4 534 aaPredicted RBP15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 KIAA1468Q9P260 1216 aa15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 STK17AQ9UEE5 414 aa15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 KIAA1024Q9UPX6 916 aa15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SAMM50Q9Y512 469 aa15.52■□□□□ 0.07
CDK5RAP3-219ENST00000580670 PRR29P0C7W0 189 aa15.51■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SPATA31C1P0DKV0 1188 aa15.51■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SP2Q02086 613 aa15.51■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SH3RF1Q7Z6J0 888 aa15.51■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SOCS4Q8WXH5 440 aa15.51■□□□□ 0.07
CDK5RAP3-219ENST00000580670 DYDC2Q96IM9 177 aa15.51■□□□□ 0.07
CDK5RAP3-219ENST00000580670 HSD17B14Q9BPX1 270 aa15.51■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SENP7Q9BQF6 1050 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms