RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 KIAA0100Q14667 2235 aaKnown RBP8.5□□□□□ -1.05
PPP4R1-216ENST00000580283 KIF7Q2M1P5 1343 aa8.5□□□□□ -1.05
PPP4R1-216ENST00000580283 UBN2Q6ZU65 1347 aa8.5□□□□□ -1.05
PPP4R1-216ENST00000580283 RBBP6Q7Z6E9 1792 aaKnown RBP8.49□□□□□ -1.05
PPP4R1-216ENST00000580283 BTBD11A6QL63 1104 aa8.49□□□□□ -1.05
PPP4R1-216ENST00000580283 RAD17O75943 681 aa8.49□□□□□ -1.05
PPP4R1-216ENST00000580283 CLCQ05315 142 aa8.49□□□□□ -1.05
PPP4R1-216ENST00000580283 LRRFIP1Q32MZ4 808 aaKnown RBP8.49□□□□□ -1.05
PPP4R1-216ENST00000580283 ZNF654Q8IZM8 581 aa8.49□□□□□ -1.05
PPP4R1-216ENST00000580283 RNF141Q8WVD5 230 aa8.49□□□□□ -1.05
PPP4R1-216ENST00000580283 UBE2FQ969M7 185 aa8.49□□□□□ -1.05
PPP4R1-216ENST00000580283 RTFDC1Q9BY42 306 aaPredicted RBP8.49□□□□□ -1.05
PPP4R1-216ENST00000580283 RC3H2Q9HBD1 1191 aaKnown RBP8.49□□□□□ -1.05
PPP4R1-216ENST00000580283 ATP13A1Q9HD20 1204 aa8.49□□□□□ -1.05
PPP4R1-216ENST00000580283 SEMA3GQ9NS98 782 aa8.49□□□□□ -1.05
PPP4R1-216ENST00000580283 ZSWIM5Q9P217 1185 aa8.49□□□□□ -1.05
PPP4R1-216ENST00000580283 ZNF652Q9Y2D9 606 aa8.49□□□□□ -1.05
PPP4R1-216ENST00000580283 CEP290O15078 2479 aa8.49□□□□□ -1.05
PPP4R1-216ENST00000580283 DUOX1Q9NRD9 1551 aa8.48□□□□□ -1.05
PPP4R1-216ENST00000580283 UNCXA6NJT0 531 aa8.48□□□□□ -1.05
PPP4R1-216ENST00000580283 ADM5C9JUS6 153 aa8.48□□□□□ -1.05
PPP4R1-216ENST00000580283 SUSD4Q5VX71 490 aa8.48□□□□□ -1.05
PPP4R1-216ENST00000580283 OVOS1Q6IE37 1185 aa8.48□□□□□ -1.05
PPP4R1-216ENST00000580283 SLC23A3Q6PIS1 610 aa8.48□□□□□ -1.05
PPP4R1-216ENST00000580283 CBLL1Q75N03 491 aa8.48□□□□□ -1.05
PPP4R1-216ENST00000580283 GCC1Q96CN9 775 aa8.48□□□□□ -1.05
PPP4R1-216ENST00000580283 KREMEN1Q96MU8 473 aa8.48□□□□□ -1.05
PPP4R1-216ENST00000580283 VPS33BQ9H267 617 aa8.48□□□□□ -1.05
PPP4R1-216ENST00000580283 GBA2Q9HCG7 927 aaPredicted RBP8.48□□□□□ -1.05
PPP4R1-216ENST00000580283 KIAA1522Q9P206 1035 aaPredicted RBP8.48□□□□□ -1.05
PPP4R1-216ENST00000580283 DDX41Q9UJV9 622 aaKnown RBP8.48□□□□□ -1.05
PPP4R1-216ENST00000580283 COL3A1P02461 1466 aaPredicted RBP8.48□□□□□ -1.05
PPP4R1-216ENST00000580283 LAMB4A4D0S4 1761 aa8.48□□□□□ -1.05
PPP4R1-216ENST00000580283 RGS13O14921 159 aa8.47□□□□□ -1.05
PPP4R1-216ENST00000580283 DIAPH1O60610 1272 aaKnown RBP8.47□□□□□ -1.05
PPP4R1-216ENST00000580283 TBC1D8O95759 1140 aa8.47□□□□□ -1.05
PPP4R1-216ENST00000580283 SNRPA1P09661 255 aaKnown RBP8.47□□□□□ -1.05
PPP4R1-216ENST00000580283 TTLL7Q6ZT98 887 aa8.47□□□□□ -1.05
PPP4R1-216ENST00000580283 NPM2Q86SE8 214 aaKnown RBP8.47□□□□□ -1.05
PPP4R1-216ENST00000580283 RPGRQ92834 1020 aaKnown RBP8.47□□□□□ -1.05
PPP4R1-216ENST00000580283 Q96M66 194 aa8.47□□□□□ -1.05
PPP4R1-216ENST00000580283 ASPNQ9BXN1 380 aa8.47□□□□□ -1.05
PPP4R1-216ENST00000580283 TRIT1Q9H3H1 467 aaKnown RBP8.47□□□□□ -1.05
PPP4R1-216ENST00000580283 R3HDMLQ9H3Y0 253 aa8.47□□□□□ -1.05
PPP4R1-216ENST00000580283 LMCD1Q9NZU5 365 aa8.47□□□□□ -1.05
PPP4R1-216ENST00000580283 ATP6V0A2Q9Y487 856 aa8.47□□□□□ -1.05
PPP4R1-216ENST00000580283 ASTN2O75129 1339 aaPredicted RBP8.47□□□□□ -1.05
PPP4R1-216ENST00000580283 TRIOBPQ9H2D6 2365 aa8.47□□□□□ -1.05
PPP4R1-216ENST00000580283 DLG5Q8TDM6 1919 aa8.46□□□□□ -1.05
PPP4R1-216ENST00000580283 BIN1O00499 593 aa8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 NTSR2O95665 410 aa8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 RNASE1P07998 156 aaKnown RBP8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 GPTP24298 496 aa8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 RACK1P63244 317 aaKnown RBP8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 KIAA2012Q0VF49 1180 aa8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 TBC1D10BQ4KMP7 808 aaPredicted RBP8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 KRT26Q7Z3Y9 468 aa8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 ZNF34Q8IZ26 560 aa8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 C2orf69Q8N8R5 385 aa8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 DTWD2Q8NBA8 298 aa8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 RBM17Q96I25 401 aaKnown RBP8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 CARS2Q9HA77 564 aaKnown RBP8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 PRDM7Q9NQW5 492 aa8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 MBNL3Q9NUK0 354 aaKnown RBP8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 GPATCH2Q9NW75 528 aa8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 CDHR2Q9BYE9 1310 aa8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 COL4A1P02462 1669 aa8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 LRRC37AA6NMS7 1700 aa8.46□□□□□ -1.06
PPP4R1-216ENST00000580283 ERVV-1B6SEH8 477 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 PAX4O43316 350 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 RNF4P78317 190 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 HDLBPQ00341 1268 aaKnown RBP8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 TNIP1Q15025 636 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 PKN2Q16513 984 aaKnown RBP8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 CDCP2Q5VXM1 449 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 NLRC3Q7RTR2 1065 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 METTL16Q86W50 562 aaKnown RBP8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 NT5DC4Q86YG4 428 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 RASAL3Q86YV0 1011 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 NGEFQ8N5V2 710 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 TMEM40Q8WWA1 233 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 DPF2Q92785 391 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 ATG4CQ96DT6 458 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 FERD3LQ96RJ6 166 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 NYXQ9GZU5 481 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.45□□□□□ -1.061e-6■□□□□ 10.1
PPP4R1-216ENST00000580283 CNNM2Q9H8M5 875 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 ADAMTS6Q9UKP5 1117 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 ABCC4O15439 1325 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 PSME4Q14997 1843 aa8.45□□□□□ -1.06
PPP4R1-216ENST00000580283 H7C1D1 291 aa8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 RBAK-RBAKDNI3L0D1 243 aa8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 PSMD14O00487 310 aa8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 LRRN2O75325 713 aa8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 IMPDH2P12268 514 aa8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 DCTN1Q14203 1278 aa8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 SLC10A5Q5PT55 438 aa8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 FBXW10Q5XX13 1052 aa8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 FBXO46Q6PJ61 603 aaPredicted RBP8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 MOB2Q70IA6 237 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms