RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 MMP1P03956 469 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 GOLGA8HP0CJ92 632 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 TOP1P11387 765 aaKnown RBP10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 HOXD8P13378 290 aaPredicted RBP10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 EIF2AK2P19525 551 aaKnown RBP10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 DNAJB1P25685 340 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 BMPR1AP36894 532 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 MRPL12P52815 198 aaKnown RBP10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 ZNF543Q08ER8 600 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 SIGLEC14Q08ET2 396 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 ADAM15Q13444 863 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 CAMK1Q14012 370 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 PKN1Q16512 942 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 HSDL1Q3SXM5 330 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 VPS53Q5VIR6 699 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 SMRP1Q8NCR6 262 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 LMAN2LQ9H0V9 348 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 DCTPP1Q9H773 170 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 RC3H2Q9HBD1 1191 aaKnown RBP10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 MRVI1Q9Y6F6 885 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 MYO10Q9HD67 2058 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 LOXHD1Q8IVV2 1947 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 LAMA4Q16363 1823 aa10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 C17orf102A2RUQ5 167 aa10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 ORC4O43929 436 aa10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 EYA4O95677 639 aa10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 GLP2RO95838 553 aa10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 AVPR2P30518 371 aa10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 HOXC8P31273 242 aa10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 AAMPQ13685 434 aa10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 LAMC2Q13753 1193 aa10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 CBX2Q14781 532 aaPredicted RBP10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 STXBP2Q15833 593 aa10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 RRP12Q5JTH9 1297 aaKnown RBP10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 ZMYM1Q5SVZ6 1142 aa10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 NSUN6Q8TEA1 469 aaKnown RBP10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 ATP6V0A1Q93050 837 aa10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 IL17RAQ96F46 866 aa10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 RMDN3Q96TC7 470 aa10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 C16orf70Q9BSU1 422 aa10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 FSD1Q9BTV5 496 aa10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 BARX2Q9UMQ3 279 aaPredicted RBP10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 USP15Q9Y4E8 981 aaPredicted RBP10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 PCDHGC5Q9Y5F6 944 aa10.87□□□□□ -0.67
SMARCD2-208ENST00000580054 TTC41PQ6P2S7 1318 aa10.86□□□□□ -0.67
SMARCD2-208ENST00000580054 PRR23AA6NEV1 266 aa10.86□□□□□ -0.67
SMARCD2-208ENST00000580054 RB1P06400 928 aa10.86□□□□□ -0.67
SMARCD2-208ENST00000580054 SMIM10L2AP0DMW4 78 aa10.86□□□□□ -0.67
SMARCD2-208ENST00000580054 SMIM10L2BP0DMW5 78 aa10.86□□□□□ -0.67
SMARCD2-208ENST00000580054 SNHG28P0DPA3 235 aa10.86□□□□□ -0.67
SMARCD2-208ENST00000580054 CDC37Q16543 378 aaPredicted RBP10.86□□□□□ -0.67
SMARCD2-208ENST00000580054 RGS22Q8NE09 1264 aa10.86□□□□□ -0.67
SMARCD2-208ENST00000580054 PI4K2BQ8TCG2 481 aa10.86□□□□□ -0.67
SMARCD2-208ENST00000580054 CLP1Q92989 425 aaKnown RBP10.86□□□□□ -0.67
SMARCD2-208ENST00000580054 RPGRIP1Q96KN7 1286 aa10.86□□□□□ -0.67
SMARCD2-208ENST00000580054 SPATA33Q96N06 139 aa10.86□□□□□ -0.67
SMARCD2-208ENST00000580054 UBA5Q9GZZ9 404 aa10.86□□□□□ -0.67
SMARCD2-208ENST00000580054 TOMM22Q9NS69 142 aa10.86□□□□□ -0.67
SMARCD2-208ENST00000580054 PNMA2Q9UL42 364 aa10.86□□□□□ -0.67
SMARCD2-208ENST00000580054 PROB1E7EW31 1015 aa10.85□□□□□ -0.67
SMARCD2-208ENST00000580054 KDM4AO75164 1064 aa10.85□□□□□ -0.67
SMARCD2-208ENST00000580054 GGPS1O95749 300 aa10.85□□□□□ -0.67
SMARCD2-208ENST00000580054 NR3C2P08235 984 aa10.85□□□□□ -0.67
SMARCD2-208ENST00000580054 UBA1P22314 1058 aaKnown RBP10.85□□□□□ -0.67
SMARCD2-208ENST00000580054 RBM10P98175 930 aaKnown RBP10.85□□□□□ -0.67
SMARCD2-208ENST00000580054 COASYQ13057 564 aa10.85□□□□□ -0.67
SMARCD2-208ENST00000580054 ARHGEF16Q5VV41 709 aa10.85□□□□□ -0.67
SMARCD2-208ENST00000580054 MYSM1Q5VVJ2 828 aa10.85□□□□□ -0.67
SMARCD2-208ENST00000580054 OTUD7AQ8TE49 926 aaPredicted RBP10.85□□□□□ -0.67
SMARCD2-208ENST00000580054 GPKOWQ92917 476 aaPredicted RBP eCLIP10.85□□□□□ -0.67
SMARCD2-208ENST00000580054 ZFP91Q96JP5 570 aaPredicted RBP10.85□□□□□ -0.67
SMARCD2-208ENST00000580054 IWS1Q96ST2 819 aa10.85□□□□□ -0.67
SMARCD2-208ENST00000580054 PXMP2Q9NR77 195 aa10.85□□□□□ -0.67
SMARCD2-208ENST00000580054 ANAPC4Q9UJX5 808 aa10.85□□□□□ -0.67
SMARCD2-208ENST00000580054 RWDD3Q9Y3V2 267 aa10.85□□□□□ -0.67
SMARCD2-208ENST00000580054 ABCB11O95342 1321 aa10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 EP300Q09472 2414 aaPredicted RBP10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 PPFIA4O75335 1185 aa10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 EIF3JO75822 258 aaKnown RBP10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 LGALS2P05162 132 aa10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 ITGB1P05556 798 aa10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 FGRP09769 529 aa10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 GHRP10912 638 aa10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 NRIP1P48552 1158 aa10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 SP2Q02086 613 aa10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 BTG3Q14201 252 aaPredicted RBP10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 CELF3Q5SZQ8 465 aaKnown RBP10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 RBM23Q86U06 439 aaKnown RBP10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 EFHBQ8N7U6 833 aa10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 IL31RAQ8NI17 732 aa10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 APBB2Q92870 758 aa10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 PHF7Q9BWX1 381 aaPredicted RBP10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 RNPEPQ9H4A4 650 aa10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 BCAS3Q9H6U6 928 aa10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 PLAGL2Q9UPG8 496 aa10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 MRPL42Q9Y6G3 142 aaKnown RBP10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 CCDC171Q6TFL3 1326 aa10.84□□□□□ -0.67
SMARCD2-208ENST00000580054 DMXL1Q9Y485 3027 aa10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 NCOR2Q9Y618 2525 aa10.83□□□□□ -0.68
SMARCD2-208ENST00000580054 H3BRB1 525 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms