RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 NCOR2Q9Y618 2525 aa16.28■□□□□ 0.2
CSNK1D-211ENST00000579316 FRMPD2Q68DX3 1309 aaPredicted RBP16.27■□□□□ 0.2
CSNK1D-211ENST00000579316 SYTL5Q8TDW5 730 aaPredicted RBP16.27■□□□□ 0.2
CSNK1D-211ENST00000579316 OSBPL7Q9BZF2 842 aa16.27■□□□□ 0.2
CSNK1D-211ENST00000579316 GPCPD1Q9NPB8 672 aa16.27■□□□□ 0.2
CSNK1D-211ENST00000579316 INCENPQ9NQS7 918 aa16.27■□□□□ 0.2
CSNK1D-211ENST00000579316 TRPC6Q9Y210 931 aa16.27■□□□□ 0.2
CSNK1D-211ENST00000579316 USP15Q9Y4E8 981 aaPredicted RBP16.27■□□□□ 0.2
CSNK1D-211ENST00000579316 EP300Q09472 2414 aaPredicted RBP16.26■□□□□ 0.19
CSNK1D-211ENST00000579316 ORC4O43929 436 aa16.26■□□□□ 0.19
CSNK1D-211ENST00000579316 EIF3JO75822 258 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-211ENST00000579316 PDHBP11177 359 aa16.26■□□□□ 0.19
CSNK1D-211ENST00000579316 TOP1P11387 765 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-211ENST00000579316 ID4P47928 161 aa16.26■□□□□ 0.19
CSNK1D-211ENST00000579316 PTPN21Q16825 1174 aa16.26■□□□□ 0.19
CSNK1D-211ENST00000579316 PANK1Q8TE04 598 aa16.26■□□□□ 0.19
CSNK1D-211ENST00000579316 P2RX5Q93086 422 aa16.26■□□□□ 0.19
CSNK1D-211ENST00000579316 TAAR1Q96RJ0 339 aa16.26■□□□□ 0.19
CSNK1D-211ENST00000579316 TMEM47Q9BQJ4 181 aa16.26■□□□□ 0.19
CSNK1D-211ENST00000579316 COL20A1Q9P218 1284 aa16.26■□□□□ 0.19
CSNK1D-211ENST00000579316 DNAH14Q0VDD8 3507 aa16.25■□□□□ 0.19
CSNK1D-211ENST00000579316 C17orf102A2RUQ5 167 aa16.25■□□□□ 0.19
CSNK1D-211ENST00000579316 FGRP09769 529 aa16.25■□□□□ 0.19
CSNK1D-211ENST00000579316 ATF7P17544 494 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-211ENST00000579316 ZNF543Q08ER8 600 aa16.25■□□□□ 0.19
CSNK1D-211ENST00000579316 ATP6V0A1Q93050 837 aa16.25■□□□□ 0.19
CSNK1D-211ENST00000579316 RMDN3Q96TC7 470 aa16.25■□□□□ 0.19
CSNK1D-211ENST00000579316 C16orf70Q9BSU1 422 aa16.25■□□□□ 0.19
CSNK1D-211ENST00000579316 LRRCC1Q9C099 1032 aa16.25■□□□□ 0.19
CSNK1D-211ENST00000579316 ANAPC4Q9UJX5 808 aa16.25■□□□□ 0.19
CSNK1D-211ENST00000579316 PLAGL2Q9UPG8 496 aa16.25■□□□□ 0.19
CSNK1D-211ENST00000579316 MRVI1Q9Y6F6 885 aa16.25■□□□□ 0.19
CSNK1D-211ENST00000579316 TPRP12270 2363 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-211ENST00000579316 MYH7BA7E2Y1 1941 aa16.24■□□□□ 0.19
CSNK1D-211ENST00000579316 FOXP2O15409 715 aa16.24■□□□□ 0.19
CSNK1D-211ENST00000579316 RANBP6O60518 1105 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-211ENST00000579316 GLP2RO95838 553 aa16.24■□□□□ 0.19
CSNK1D-211ENST00000579316 SNHG28P0DPA3 235 aa16.24■□□□□ 0.19
CSNK1D-211ENST00000579316 NAALADL2Q58DX5 795 aa16.24■□□□□ 0.19
CSNK1D-211ENST00000579316 FAM26DQ5JW98 314 aa16.24■□□□□ 0.19
CSNK1D-211ENST00000579316 MYSM1Q5VVJ2 828 aa16.24■□□□□ 0.19
CSNK1D-211ENST00000579316 SUSD6Q92537 303 aa16.24■□□□□ 0.19
CSNK1D-211ENST00000579316 ZNF689Q96CS4 500 aaPredicted RBP16.24■□□□□ 0.19
CSNK1D-211ENST00000579316 ZBTB40Q9NUA8 1239 aa16.24■□□□□ 0.19
CSNK1D-211ENST00000579316 TTC3P53804 2025 aa16.23■□□□□ 0.19
CSNK1D-211ENST00000579316 KMT2BQ9UMN6 2715 aaPredicted RBP16.23■□□□□ 0.19
CSNK1D-211ENST00000579316 TREHO43280 583 aa16.23■□□□□ 0.19
CSNK1D-211ENST00000579316 CTSHP09668 335 aa16.23■□□□□ 0.19
CSNK1D-211ENST00000579316 DNAJB1P25685 340 aa16.23■□□□□ 0.19
CSNK1D-211ENST00000579316 CTDSPL2Q05D32 466 aa16.23■□□□□ 0.19
CSNK1D-211ENST00000579316 HSDL1Q3SXM5 330 aa16.23■□□□□ 0.19
CSNK1D-211ENST00000579316 USH1GQ495M9 461 aa16.23■□□□□ 0.19
CSNK1D-211ENST00000579316 ADGRD2Q7Z7M1 963 aa16.23■□□□□ 0.19
CSNK1D-211ENST00000579316 TBC1D5Q92609 795 aa16.23■□□□□ 0.19
CSNK1D-211ENST00000579316 RPGRIP1Q96KN7 1286 aa16.23■□□□□ 0.19
CSNK1D-211ENST00000579316 RIPOR3Q96MK2 946 aa16.23■□□□□ 0.19
CSNK1D-211ENST00000579316 SEC62Q99442 399 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-211ENST00000579316 TCP11L1Q9NUJ3 509 aa16.23■□□□□ 0.19
CSNK1D-211ENST00000579316 ABCB11O95342 1321 aa16.22■□□□□ 0.19
CSNK1D-211ENST00000579316 DMXL1Q9Y485 3027 aa16.22■□□□□ 0.19
CSNK1D-211ENST00000579316 KDM4AO75164 1064 aa16.22■□□□□ 0.19
CSNK1D-211ENST00000579316 PDGFBP01127 241 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-211ENST00000579316 SMIM10L2AP0DMW4 78 aa16.22■□□□□ 0.19
CSNK1D-211ENST00000579316 SMIM10L2BP0DMW5 78 aa16.22■□□□□ 0.19
CSNK1D-211ENST00000579316 BTG3Q14201 252 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-211ENST00000579316 CELF3Q5SZQ8 465 aaKnown RBP16.22■□□□□ 0.19
CSNK1D-211ENST00000579316 YTHDC1Q96MU7 727 aaKnown RBP16.22■□□□□ 0.19
CSNK1D-211ENST00000579316 SPATA33Q96N06 139 aa16.22■□□□□ 0.19
CSNK1D-211ENST00000579316 BARX2Q9UMQ3 279 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-211ENST00000579316 RGS20O76081 388 aa16.21■□□□□ 0.19
CSNK1D-211ENST00000579316 ITGB1P05556 798 aa16.21■□□□□ 0.19
CSNK1D-211ENST00000579316 NR3C2P08235 984 aa16.21■□□□□ 0.19
CSNK1D-211ENST00000579316 ZMYM1Q5SVZ6 1142 aa16.21■□□□□ 0.19
CSNK1D-211ENST00000579316 KCNV1Q6PIU1 500 aa16.21■□□□□ 0.19
CSNK1D-211ENST00000579316 MCF2L2Q86YR7 1114 aa16.21■□□□□ 0.19
CSNK1D-211ENST00000579316 SPPL3Q8TCT6 385 aa16.21■□□□□ 0.19
CSNK1D-211ENST00000579316 RNPEPQ9H4A4 650 aa16.21■□□□□ 0.19
CSNK1D-211ENST00000579316 PXMP2Q9NR77 195 aa16.21■□□□□ 0.19
CSNK1D-211ENST00000579316 H3BRB1 525 aa16.2■□□□□ 0.18
CSNK1D-211ENST00000579316 SMARCA5O60264 1052 aaPredicted RBP16.2■□□□□ 0.18
CSNK1D-211ENST00000579316 DGKIO75912 1065 aa16.2■□□□□ 0.18
CSNK1D-211ENST00000579316 CSPG5O95196 566 aa16.2■□□□□ 0.18
CSNK1D-211ENST00000579316 EIF2AK2P19525 551 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-211ENST00000579316 NRIP1P48552 1158 aa16.2■□□□□ 0.18
CSNK1D-211ENST00000579316 GPATCH4Q5T3I0 446 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-211ENST00000579316 ARHGEF16Q5VV41 709 aa16.2■□□□□ 0.18
CSNK1D-211ENST00000579316 MCTP2Q6DN12 878 aa16.2■□□□□ 0.18
CSNK1D-211ENST00000579316 ATP8B4Q8TF62 1192 aa16.2■□□□□ 0.18
CSNK1D-211ENST00000579316 NKD2Q969F2 451 aaPredicted RBP16.2■□□□□ 0.18
CSNK1D-211ENST00000579316 GPATCH3Q96I76 525 aa16.2■□□□□ 0.18
CSNK1D-211ENST00000579316 TUT1Q9H6E5 874 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-211ENST00000579316 EHMT1Q9H9B1 1298 aa16.2■□□□□ 0.18
CSNK1D-211ENST00000579316 KIAA1671Q9BY89 1806 aa16.19■□□□□ 0.18
CSNK1D-211ENST00000579316 CEP250Q9BV73 2442 aa16.19■□□□□ 0.18
CSNK1D-211ENST00000579316 ACACBO00763 2458 aa16.19■□□□□ 0.18
CSNK1D-211ENST00000579316 GGPS1O95749 300 aa16.19■□□□□ 0.18
CSNK1D-211ENST00000579316 ADAM17P78536 824 aa16.19■□□□□ 0.18
CSNK1D-211ENST00000579316 GHRHRQ02643 423 aa16.19■□□□□ 0.18
CSNK1D-211ENST00000579316 CMTR2Q8IYT2 770 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-211ENST00000579316 TMEM105Q8N8V8 129 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms