RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 HMGN5P82970 282 aaKnown RBP9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 ITGA7Q13683 1181 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 C8orf34Q49A92 452 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 CEP55Q53EZ4 464 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 MYSM1Q5VVJ2 828 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 WWC2Q6AWC2 1192 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 USP17L6PQ6QN14 398 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 MOXD1Q6UVY6 613 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 REXO1Q8N1G1 1221 aaKnown RBP9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 CCDC155Q8N6L0 562 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 DAGLBQ8NCG7 672 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 TCEANC2Q96MN5 208 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 SLC26A6Q9BXS9 759 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 UPF3BQ9BZI7 483 aaKnown RBP9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 JADE2Q9NQC1 790 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 PDGFCQ9NRA1 345 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 TBC1D22BQ9NU19 505 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 COL20A1Q9P218 1284 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 TCEAL9Q9UHQ7 104 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 UBIAD1Q9Y5Z9 338 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 RLFQ13129 1914 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 NFASCO94856 1347 aa9.79□□□□□ -0.84
PPP4R1-210ENST00000578557 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 GRXCR2A6NFK2 248 aa9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 NOP56O00567 594 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 KIAA0355O15063 1070 aa9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 PFKMP08237 780 aa9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 CPA1P15085 419 aa9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 CIITAP33076 1130 aa9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 ZNF76P36508 570 aa9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 CCT2P78371 535 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 PURAQ00577 322 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 MTMR1Q13613 665 aa9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 TRIM29Q14134 588 aa9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 NBR1Q14596 966 aa9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 PKN1Q16512 942 aa9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 LRRC26Q2I0M4 334 aa9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 RPUSD2Q8IZ73 545 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 CMTR1Q8N1G2 835 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 TMEM199Q8N511 208 aa9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 DIS3LQ8TF46 1054 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 SEPT1Q8WYJ6 367 aa9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 MXRA8Q9BRK3 442 aa9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 DAXXQ9UER7 740 aaPredicted RBP9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 ZNF215Q9UL58 517 aaPredicted RBP9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 MYH8P13535 1937 aa9.78□□□□□ -0.84
PPP4R1-210ENST00000578557 LAMA4Q16363 1823 aa9.77□□□□□ -0.84
PPP4R1-210ENST00000578557 HTTP42858 3142 aa9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 MEIS1O00470 390 aa9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 CTAGE5O15320 804 aa9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 CAND2O75155 1236 aa9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 GCFC2P16383 781 aaKnown RBP9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 RFC2P35250 354 aa9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 AK2P54819 239 aa9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 MRPS9P82933 396 aaKnown RBP9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 TLE2Q04725 743 aa9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 BFSP2Q13515 415 aa9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 LY6KQ17RY6 165 aa9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 ANO1Q5XXA6 986 aa9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 KRT25Q7Z3Z0 450 aa9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 PIBF1Q8WXW3 757 aa9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 SPATA33Q96N06 139 aa9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 SDF4Q9BRK5 362 aa9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 MTIF3Q9H2K0 278 aaKnown RBP9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 TMEM39AQ9NV64 488 aa9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 PCDHA4Q9UN74 947 aa9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 ATP11BQ9Y2G3 1177 aa9.77□□□□□ -0.85
PPP4R1-210ENST00000578557 H0YGN5 161 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 RGS20O76081 388 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 GGPS1O95749 300 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 TIMP1P01033 207 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 CD4P01730 458 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 MMP3P08254 477 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 RAG1P15918 1043 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 MLLT3P42568 568 aaPredicted RBP9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 ARHGAP4P98171 946 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 ARHGAP1Q07960 439 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 SCRN1Q12765 414 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 SAFBQ15424 915 aaKnown RBP eCLIP9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 PLPPR4Q7Z2D5 763 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 SMAP1Q8IYB5 467 aaPredicted RBP9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 C7orf61Q8IZ16 206 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 BLIDQ8IZY5 108 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 C7orf31Q8N865 590 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 CAGE1Q8TC20 777 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 GTF3C6Q969F1 213 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 FERMT2Q96AC1 680 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 PURBQ96QR8 312 aaKnown RBP9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 RIT2Q99578 217 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 GDF15Q99988 308 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 ANO3Q9BYT9 981 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 ADAM33Q9BZ11 813 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 SMARCAD1Q9H4L7 1026 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 AZI2Q9H6S1 392 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 TPCN1Q9ULQ1 816 aa9.76□□□□□ -0.85
PPP4R1-210ENST00000578557 MGAMO43451 1857 aa9.75□□□□□ -0.85
PPP4R1-210ENST00000578557 CYP3A7-CYP3A51PA0A087WV96 503 aa9.75□□□□□ -0.85
PPP4R1-210ENST00000578557 RRN3P2A6NIE6 340 aa9.75□□□□□ -0.85
PPP4R1-210ENST00000578557 ARHGAP33O14559 1287 aa9.75□□□□□ -0.85
PPP4R1-210ENST00000578557 TBX3O15119 743 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms