RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 HSDL1Q3SXM5 330 aa15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 C8orf34Q49A92 452 aa15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 CPLX2Q6PUV4 134 aaKnown RBP15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 TRIM22Q8IYM9 498 aa15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 FAM177A1Q8N128 213 aaPredicted RBP15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 USP38Q8NB14 1042 aa15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 IL27Q8NEV9 243 aa15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 KAT2BQ92831 832 aa15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 LARP6Q9BRS8 491 aaKnown RBP15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 KATNAL1Q9BW62 490 aa15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 C6orf50Q9HD87 102 aa15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 SH3GLB2Q9NR46 395 aa15.61■□□□□ 0.09
CSNK1D-208ENST00000578501 F2P00734 622 aa15.6■□□□□ 0.09
CSNK1D-208ENST00000578501 SREBF1P36956 1147 aa15.6■□□□□ 0.09
CSNK1D-208ENST00000578501 SSRP1Q08945 709 aaKnown RBP15.6■□□□□ 0.09
CSNK1D-208ENST00000578501 MFSD5Q6N075 450 aa15.6■□□□□ 0.09
CSNK1D-208ENST00000578501 CCDC148Q8NFR7 591 aa15.6■□□□□ 0.09
CSNK1D-208ENST00000578501 TIFAQ96CG3 184 aa15.6■□□□□ 0.09
CSNK1D-208ENST00000578501 ASB2Q96Q27 587 aa15.6■□□□□ 0.09
CSNK1D-208ENST00000578501 ANO3Q9BYT9 981 aa15.6■□□□□ 0.09
CSNK1D-208ENST00000578501 TRPV6Q9H1D0 765 aa15.6■□□□□ 0.09
CSNK1D-208ENST00000578501 JADE2Q9NQC1 790 aa15.6■□□□□ 0.09
CSNK1D-208ENST00000578501 THEGQ9P2T0 379 aa15.6■□□□□ 0.09
CSNK1D-208ENST00000578501 TPCN1Q9ULQ1 816 aa15.6■□□□□ 0.09
CSNK1D-208ENST00000578501 HAS3O00219 553 aa15.59■□□□□ 0.09
CSNK1D-208ENST00000578501 PFKFB2O60825 505 aa15.59■□□□□ 0.09
CSNK1D-208ENST00000578501 CDKL5O76039 1030 aa15.59■□□□□ 0.09
CSNK1D-208ENST00000578501 DEXIO95424 95 aa15.59■□□□□ 0.09
CSNK1D-208ENST00000578501 MRPS5P82675 430 aaKnown RBP15.59■□□□□ 0.09
CSNK1D-208ENST00000578501 SCRN1Q12765 414 aa15.59■□□□□ 0.09
CSNK1D-208ENST00000578501 MTMR1Q13613 665 aa15.59■□□□□ 0.09
CSNK1D-208ENST00000578501 CYFIP1Q7L576 1253 aa15.59■□□□□ 0.09
CSNK1D-208ENST00000578501 BICD2Q8TD16 824 aa15.59■□□□□ 0.09
CSNK1D-208ENST00000578501 SLKQ9H2G2 1235 aaPredicted RBP15.59■□□□□ 0.09
CSNK1D-208ENST00000578501 NOP56O00567 594 aaKnown RBP15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 KCNA2P16389 499 aa15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 EPHB4P54760 987 aa15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 AK2P54819 239 aa15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 STK3Q13188 491 aa15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 CEP55Q53EZ4 464 aa15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 NIPA1Q7RTP0 329 aa15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 REXO1Q8N1G1 1221 aaKnown RBP15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 TMEM199Q8N511 208 aa15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 ADAMTS19Q8TE59 1207 aa15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 CRYGNQ8WXF5 182 aa15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 GPR20Q99678 358 aa15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 MXRA8Q9BRK3 442 aa15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 C16orf70Q9BSU1 422 aa15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 NOC4LQ9BVI4 516 aaKnown RBP15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 HIPK3Q9H422 1215 aa15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 BCAS3Q9H6U6 928 aa15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 TRMT13Q9NUP7 481 aaKnown RBP15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 TMEM260Q9NX78 707 aa15.58■□□□□ 0.08
CSNK1D-208ENST00000578501 ATP9AO75110 1047 aa15.57■□□□□ 0.08
CSNK1D-208ENST00000578501 CYP3A4P08684 503 aa15.57■□□□□ 0.08
CSNK1D-208ENST00000578501 PSEN2P49810 448 aa15.57■□□□□ 0.08
CSNK1D-208ENST00000578501 NEK4P51957 841 aa15.57■□□□□ 0.08
CSNK1D-208ENST00000578501 ARHGAP4P98171 946 aa15.57■□□□□ 0.08
CSNK1D-208ENST00000578501 PPIGQ13427 754 aaKnown RBP eCLIP15.57■□□□□ 0.088e-9■□□□□ 11.1
CSNK1D-208ENST00000578501 MFSD10Q14728 455 aa15.57■□□□□ 0.08
CSNK1D-208ENST00000578501 FAM47CQ5HY64 1035 aa15.57■□□□□ 0.08
CSNK1D-208ENST00000578501 JAKMIP3Q5VZ66 844 aa15.57■□□□□ 0.08
CSNK1D-208ENST00000578501 PPM1EQ8WY54 764 aa15.57■□□□□ 0.08
CSNK1D-208ENST00000578501 PGBD1Q96JS3 809 aa15.57■□□□□ 0.08
CSNK1D-208ENST00000578501 UHRF1Q96T88 793 aaPredicted RBP15.57■□□□□ 0.08
CSNK1D-208ENST00000578501 C1QTNF1Q9BXJ1 281 aa15.57■□□□□ 0.08
CSNK1D-208ENST00000578501 VPS54Q9P1Q0 977 aa15.57■□□□□ 0.08
CSNK1D-208ENST00000578501 RAPGEFL1Q9UHV5 662 aa15.57■□□□□ 0.08
CSNK1D-208ENST00000578501 MYH7BA7E2Y1 1941 aa15.56■□□□□ 0.08
CSNK1D-208ENST00000578501 EYSQ5T1H1 3165 aa15.56■□□□□ 0.08
CSNK1D-208ENST00000578501 H3BRB1 525 aa15.56■□□□□ 0.08
CSNK1D-208ENST00000578501 MEIS1O00470 390 aa15.56■□□□□ 0.08
CSNK1D-208ENST00000578501 SORBS3O60504 671 aa15.56■□□□□ 0.08
CSNK1D-208ENST00000578501 PPFIA3O75145 1194 aa15.56■□□□□ 0.08
CSNK1D-208ENST00000578501 ZNF286BP0CG31 522 aa15.56■□□□□ 0.08
CSNK1D-208ENST00000578501 CYP2C18P33260 490 aa15.56■□□□□ 0.08
CSNK1D-208ENST00000578501 KIAA0753Q2KHM9 967 aa15.56■□□□□ 0.08
CSNK1D-208ENST00000578501 GALNT17Q6IS24 598 aa15.56■□□□□ 0.08
CSNK1D-208ENST00000578501 C7orf31Q8N865 590 aa15.56■□□□□ 0.08
CSNK1D-208ENST00000578501 CYP2W1Q8TAV3 490 aa15.56■□□□□ 0.08
CSNK1D-208ENST00000578501 TSPYL2Q9H2G4 693 aaPredicted RBP15.56■□□□□ 0.08
CSNK1D-208ENST00000578501 TUT1Q9H6E5 874 aaKnown RBP15.56■□□□□ 0.08
CSNK1D-208ENST00000578501 KCNH7Q9NS40 1196 aa15.56■□□□□ 0.08
CSNK1D-208ENST00000578501 GTF2IRD1Q9UHL9 959 aa15.56■□□□□ 0.08
CSNK1D-208ENST00000578501 STK36Q9NRP7 1315 aa15.56■□□□□ 0.08
CSNK1D-208ENST00000578501 NFASCO94856 1347 aa15.55■□□□□ 0.08
CSNK1D-208ENST00000578501 PITPNM1O00562 1244 aa15.55■□□□□ 0.08
CSNK1D-208ENST00000578501 ADAMTS3O15072 1205 aa15.55■□□□□ 0.08
CSNK1D-208ENST00000578501 LGALS2P05162 132 aa15.55■□□□□ 0.08
CSNK1D-208ENST00000578501 NLRP5P59047 1200 aa15.55■□□□□ 0.08
CSNK1D-208ENST00000578501 PTGISQ16647 500 aa15.55■□□□□ 0.08
CSNK1D-208ENST00000578501 GDF6Q6KF10 455 aaPredicted RBP15.55■□□□□ 0.08
CSNK1D-208ENST00000578501 PPP1R12CQ9BZL4 782 aa15.55■□□□□ 0.08
CSNK1D-208ENST00000578501 HDAC6Q9UBN7 1215 aa15.55■□□□□ 0.08
CSNK1D-208ENST00000578501 ARIH1Q9Y4X5 557 aaPredicted RBP15.55■□□□□ 0.08
CSNK1D-208ENST00000578501 CDH23Q9H251 3354 aa15.55■□□□□ 0.08
CSNK1D-208ENST00000578501 LAMA2P24043 3122 aaKnown RBP15.54■□□□□ 0.08
CSNK1D-208ENST00000578501 CYP2C9P11712 490 aa15.54■□□□□ 0.08
CSNK1D-208ENST00000578501 CSF2RAP15509 400 aa15.54■□□□□ 0.08
CSNK1D-208ENST00000578501 CIITAP33076 1130 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms