RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 MTMR1Q13613 665 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 GNPTABQ3T906 1256 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 PRR16Q569H4 304 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 METTL7BQ6UX53 244 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 NLRX1Q86UT6 975 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 PLA2G4DQ86XP0 818 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 DIS3L2Q8IYB7 885 aaKnown RBP7.96□□□□□ -1.14
SMG6-209ENST00000571442 SLC43A3Q8NBI5 491 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 PCSK9Q8NBP7 692 aaKnown RBP7.96□□□□□ -1.14
SMG6-209ENST00000571442 PPTC7Q8NI37 304 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 BICD2Q8TD16 824 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 SPATA33Q96N06 139 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 MBOAT7Q96N66 472 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 CTAGE1Q96RT6 745 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 PCYT2Q99447 389 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 GPR20Q99678 358 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 C16orf70Q9BSU1 422 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 SPC25Q9HBM1 224 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 ZMYND8Q9ULU4 1186 aaPredicted RBP7.96□□□□□ -1.14
SMG6-209ENST00000571442 ATP11BQ9Y2G3 1177 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 SZT2Q5T011 3432 aa7.96□□□□□ -1.14
SMG6-209ENST00000571442 TRIM43BA6NCK2 446 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 ARVCFO00192 962 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 HAS3O00219 553 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 MSH4O15457 936 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 PQBP1O60828 265 aaKnown RBP7.95□□□□□ -1.14
SMG6-209ENST00000571442 LGALS2P05162 132 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 KRT2P35908 639 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 MCM2P49736 904 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 CPT1AP50416 773 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 HMGN5P82970 282 aaKnown RBP7.95□□□□□ -1.14
SMG6-209ENST00000571442 TLE2Q04725 743 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 ITGA7Q13683 1181 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 LAMC2Q13753 1193 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 NONOQ15233 471 aaKnown RBP eCLIP7.95□□□□□ -1.14
SMG6-209ENST00000571442 NBPF20Q3BBV1 942 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 C1orf53Q5VUE5 145 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 GALNT17Q6IS24 598 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 KCNV1Q6PIU1 500 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 NIPA1Q7RTP0 329 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 TEX2Q8IWB9 1127 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 FAM126BQ8IXS8 530 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 FBXO18Q8NFZ0 1043 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 WASF1Q92558 559 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 TRIM43Q96BQ3 446 aaPredicted RBP7.95□□□□□ -1.14
SMG6-209ENST00000571442 C8orf76Q96K31 380 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 GLT1D1Q96MS3 346 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 SENP7Q9BQF6 1050 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 EHMT1Q9H9B1 1298 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 MLXIPQ9HAP2 919 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 PDLIM7Q9NR12 457 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 FOXD4L1Q9NU39 408 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 NR2E3Q9Y5X4 410 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 ELP1O95163 1332 aa7.95□□□□□ -1.14
SMG6-209ENST00000571442 CYP3A7-CYP3A51PA0A087WV96 503 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 A0A0U1RQG5 324 aaPredicted RBP7.94□□□□□ -1.14
SMG6-209ENST00000571442 K7ELQ4 463 aaPredicted RBP7.94□□□□□ -1.14
SMG6-209ENST00000571442 EVI5O60447 810 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 B4GALT4O60513 344 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 F2P00734 622 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 CD4P01730 458 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 CYP3A7P24462 503 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 ZNF76P36508 570 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 PSEN2P49810 448 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 USP11P51784 963 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 CHMP4BP1P59074 171 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 ZNF200P98182 395 aaPredicted RBP7.94□□□□□ -1.14
SMG6-209ENST00000571442 FAAP100Q0VG06 881 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 NEDD9Q14511 834 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 NBR1Q14596 966 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 LETM2Q2VYF4 491 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 UTP14CQ5TAP6 766 aaKnown RBP7.94□□□□□ -1.14
SMG6-209ENST00000571442 ANKRD33Q7Z3H0 272 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 KRT25Q7Z3Z0 450 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 FAM177A1Q8N128 213 aaPredicted RBP7.94□□□□□ -1.14
SMG6-209ENST00000571442 FAM184AQ8NB25 1140 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 ETNPPLQ8TBG4 499 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 HAS1Q92839 578 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 WNT8BQ93098 351 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 SNX21Q969T3 373 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 VTI1AQ96AJ9 217 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 MTG1Q9BT17 334 aaPredicted RBP7.94□□□□□ -1.14
SMG6-209ENST00000571442 TRPV6Q9H1D0 765 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 TRMT13Q9NUP7 481 aaKnown RBP7.94□□□□□ -1.14
SMG6-209ENST00000571442 POLR3EQ9NVU0 708 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 NFASCO94856 1347 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 UMODL1Q5DID0 1318 aa7.94□□□□□ -1.14
SMG6-209ENST00000571442 SCN5AQ14524 2016 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 CCDC194A0A1B0GVG4 234 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 IPO5O00410 1097 aaKnown RBP7.93□□□□□ -1.14
SMG6-209ENST00000571442 MAFGO15525 162 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 ZEB2O60315 1214 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 ATG7O95352 703 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 CYP2C9P11712 490 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 XBP1P17861 261 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 ATP4AP20648 1035 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 TCF7P36402 384 aaPredicted RBP7.93□□□□□ -1.14
SMG6-209ENST00000571442 TOB1P50616 345 aaPredicted RBP7.93□□□□□ -1.14
SMG6-209ENST00000571442 ACTR2P61160 394 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 MFSD10Q14728 455 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms